RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TMEM263Q8WUH6 116 aaKnown RBP11.5□□□□□ -0.57
COL1A1-205ENST00000476387 LINC00477Q96M19 166 aa11.5□□□□□ -0.57
COL1A1-205ENST00000476387 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
COL1A1-205ENST00000476387 IGKV2-40A0A087WW87 121 aaPredicted RBP11.49□□□□□ -0.57
COL1A1-205ENST00000476387 FXYD6-FXYD2A0A087WZ82 144 aa11.49□□□□□ -0.57
COL1A1-205ENST00000476387 TRAV12-3A0A0B4J271 114 aa11.49□□□□□ -0.57
COL1A1-205ENST00000476387 IGKV2D-40P01614 121 aaPredicted RBP11.49□□□□□ -0.57
COL1A1-205ENST00000476387 CCDC28AQ8IWP9 274 aa11.49□□□□□ -0.57
COL1A1-205ENST00000476387 HSD17B11Q8NBQ5 300 aa11.49□□□□□ -0.57
COL1A1-205ENST00000476387 SLC25A5P05141 298 aaKnown RBP11.48□□□□□ -0.57
COL1A1-205ENST00000476387 DEFB130BP0DP73 79 aa11.48□□□□□ -0.57
COL1A1-205ENST00000476387 DEFB130AP0DP74 79 aa11.48□□□□□ -0.57
COL1A1-205ENST00000476387 RAB2AP61019 212 aa11.48□□□□□ -0.57
COL1A1-205ENST00000476387 RANP62826 216 aaKnown RBP11.48□□□□□ -0.57
COL1A1-205ENST00000476387 C9orf47Q6ZRZ4 202 aa11.48□□□□□ -0.57
COL1A1-205ENST00000476387 LYPD1Q8N2G4 141 aa11.48□□□□□ -0.57
COL1A1-205ENST00000476387 OR2T35Q8NGX2 323 aa11.48□□□□□ -0.57
COL1A1-205ENST00000476387 ZNF503Q96F45 646 aa11.48□□□□□ -0.57
COL1A1-205ENST00000476387 AGPAT4-IT1Q9H0P7 198 aa11.48□□□□□ -0.57
COL1A1-205ENST00000476387 Q9H3A6 140 aa11.48□□□□□ -0.57
COL1A1-205ENST00000476387 TIMM8BQ9Y5J9 83 aaPredicted RBP11.48□□□□□ -0.57
COL1A1-205ENST00000476387 PLAC8L1A1L4L8 177 aa11.47□□□□□ -0.57
COL1A1-205ENST00000476387 C7orf71A4D174 169 aa11.47□□□□□ -0.57
COL1A1-205ENST00000476387 Q5BKY6 102 aa11.47□□□□□ -0.57
COL1A1-205ENST00000476387 PQLC2Q6ZP29 291 aa11.47□□□□□ -0.57
COL1A1-205ENST00000476387 OR10G4Q8NGN3 311 aa11.47□□□□□ -0.57
COL1A1-205ENST00000476387 OR10G9Q8NGN4 311 aa11.47□□□□□ -0.57
COL1A1-205ENST00000476387 OR10G7Q8NGN6 311 aa11.47□□□□□ -0.57
COL1A1-205ENST00000476387 RNASE8Q8TDE3 154 aaKnown RBP11.47□□□□□ -0.57
COL1A1-205ENST00000476387 PYGO2Q9BRQ0 406 aa11.47□□□□□ -0.57
COL1A1-205ENST00000476387 PSMG3Q9BT73 122 aaPredicted RBP11.47□□□□□ -0.57
COL1A1-205ENST00000476387 EIF3GO75821 320 aaKnown RBP eCLIP11.46□□□□□ -0.57
COL1A1-205ENST00000476387 GPX1P07203 203 aa11.46□□□□□ -0.57
COL1A1-205ENST00000476387 CDC34P49427 236 aaPredicted RBP11.46□□□□□ -0.57
COL1A1-205ENST00000476387 OR2G3Q8NGZ4 309 aa11.46□□□□□ -0.57
COL1A1-205ENST00000476387 VGLL1Q99990 258 aa11.46□□□□□ -0.57
COL1A1-205ENST00000476387 HERC2O95714 4834 aa11.45□□□□□ -0.58
COL1A1-205ENST00000476387 BORCS7-ASMTA0A0B4J1R7 106 aa11.45□□□□□ -0.58
COL1A1-205ENST00000476387 SNURFLB1AK76 121 aa11.45□□□□□ -0.58
COL1A1-205ENST00000476387 KLLNB2CW77 178 aa11.45□□□□□ -0.58
COL1A1-205ENST00000476387 CRISP2P16562 243 aa11.45□□□□□ -0.58
COL1A1-205ENST00000476387 ATP6V0CP27449 155 aa11.45□□□□□ -0.58
COL1A1-205ENST00000476387 BTN1A1Q13410 526 aa11.45□□□□□ -0.58
COL1A1-205ENST00000476387 FAM74A1Q5RGS3 127 aa11.45□□□□□ -0.58
COL1A1-205ENST00000476387 FAM19A4Q96LR4 140 aa11.45□□□□□ -0.58
COL1A1-205ENST00000476387 NOP10Q9NPE3 64 aaKnown RBP11.45□□□□□ -0.58
COL1A1-205ENST00000476387 TNFSF18Q9UNG2 199 aa11.45□□□□□ -0.58
COL1A1-205ENST00000476387 RBAKDNA6NC62 111 aa11.44□□□□□ -0.58
COL1A1-205ENST00000476387 RNF222A6NCQ9 220 aa11.44□□□□□ -0.58
COL1A1-205ENST00000476387 HMGB3O15347 200 aaKnown RBP11.44□□□□□ -0.58
COL1A1-205ENST00000476387 MBP02144 154 aa11.44□□□□□ -0.58
COL1A1-205ENST00000476387 NMBP08949 121 aa11.44□□□□□ -0.58
COL1A1-205ENST00000476387 RNASE4P34096 147 aaKnown RBP11.44□□□□□ -0.58
COL1A1-205ENST00000476387 ZNF138P52744 262 aa11.44□□□□□ -0.58
COL1A1-205ENST00000476387 LGALS9BQ3B8N2 356 aa11.44□□□□□ -0.58
COL1A1-205ENST00000476387 TMEM88Q6PEY1 159 aa11.44□□□□□ -0.58
COL1A1-205ENST00000476387 CMTM2Q8TAZ6 248 aa11.44□□□□□ -0.58
COL1A1-205ENST00000476387 RXFP4Q8TDU9 374 aa11.44□□□□□ -0.58
COL1A1-205ENST00000476387 OTORQ9NRC9 128 aa11.44□□□□□ -0.58
COL1A1-205ENST00000476387 ZNF492Q9P255 531 aa11.44□□□□□ -0.58
COL1A1-205ENST00000476387 ATP5G1P05496 136 aa11.43□□□□□ -0.58
COL1A1-205ENST00000476387 ARL14EPLP0DKL9 152 aa11.43□□□□□ -0.58
COL1A1-205ENST00000476387 ATP5G3P48201 142 aa11.43□□□□□ -0.58
COL1A1-205ENST00000476387 SERF2P84101 59 aa11.43□□□□□ -0.58
COL1A1-205ENST00000476387 CD300CQ08708 224 aa11.43□□□□□ -0.58
COL1A1-205ENST00000476387 ZNF680Q8NEM1 530 aa11.43□□□□□ -0.58
COL1A1-205ENST00000476387 Q8TAT8 98 aa11.43□□□□□ -0.58
COL1A1-205ENST00000476387 GNPNAT1Q96EK6 184 aaPredicted RBP11.43□□□□□ -0.58
COL1A1-205ENST00000476387 HYLS1Q96M11 299 aa11.43□□□□□ -0.58
COL1A1-205ENST00000476387 RPH3ALQ9UNE2 315 aa11.43□□□□□ -0.58
COL1A1-205ENST00000476387 TRBV7-9A0A0J9YWB2 115 aa11.42□□□□□ -0.58
COL1A1-205ENST00000476387 CBY3A6NI87 242 aa11.42□□□□□ -0.58
COL1A1-205ENST00000476387 F5H768 121 aa11.42□□□□□ -0.58
COL1A1-205ENST00000476387 RNF212Q495C1 297 aa11.42□□□□□ -0.58
COL1A1-205ENST00000476387 RPL7L1Q6DKI1 246 aaKnown RBP11.42□□□□□ -0.58
COL1A1-205ENST00000476387 UBE2DNLQ8IWF7 75 aa11.42□□□□□ -0.58
COL1A1-205ENST00000476387 ZFAND2AQ8N6M9 145 aa11.42□□□□□ -0.58
COL1A1-205ENST00000476387 C15orf53Q8NAA6 179 aa11.42□□□□□ -0.58
COL1A1-205ENST00000476387 SH3BGRL3Q9H299 93 aa11.42□□□□□ -0.58
COL1A1-205ENST00000476387 PGPA6NDG6 321 aa11.41□□□□□ -0.58
COL1A1-205ENST00000476387 DIRC3C9JPN6 131 aa11.41□□□□□ -0.58
COL1A1-205ENST00000476387 RGS13O14921 159 aa11.41□□□□□ -0.58
COL1A1-205ENST00000476387 STAG3L2P0CL84 134 aa11.41□□□□□ -0.58
COL1A1-205ENST00000476387 STAG3L3P0CL85 134 aa11.41□□□□□ -0.58
COL1A1-205ENST00000476387 EIF4E3Q8N5X7 224 aaKnown RBP11.41□□□□□ -0.58
COL1A1-205ENST00000476387 RAB24Q969Q5 203 aa11.41□□□□□ -0.58
COL1A1-205ENST00000476387 ARPC5O15511 151 aa11.4□□□□□ -0.58
COL1A1-205ENST00000476387 ZNF324O75467 553 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-205ENST00000476387 PRR9Q5T870 116 aa11.4□□□□□ -0.58
COL1A1-205ENST00000476387 ARPC5LQ9BPX5 153 aa11.4□□□□□ -0.58
COL1A1-205ENST00000476387 LINC00467Q9BRT7 94 aa11.4□□□□□ -0.58
COL1A1-205ENST00000476387 ACTR3CQ9C0K3 210 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-205ENST00000476387 A0A1B0GVY2 172 aa11.39□□□□□ -0.59
COL1A1-205ENST00000476387 G3V3Q6 166 aa11.39□□□□□ -0.59
COL1A1-205ENST00000476387 M0R2N4 97 aa11.39□□□□□ -0.59
COL1A1-205ENST00000476387 RTL8CO15255 209 aa11.39□□□□□ -0.59
COL1A1-205ENST00000476387 FAM3BP58499 235 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-205ENST00000476387 ANXA2RQ3ZCQ2 193 aa11.39□□□□□ -0.59
COL1A1-205ENST00000476387 Q6ZR54 194 aa11.39□□□□□ -0.59
COL1A1-205ENST00000476387 GSN-AS1Q9NRJ2 163 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms