RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 CXorf1O96002 111 aa10.38□□□□□ -0.75
ABCF3-211ENST00000475728 SLC25A5P05141 298 aaKnown RBP10.38□□□□□ -0.75
ABCF3-211ENST00000475728 NMBP08949 121 aa10.38□□□□□ -0.75
ABCF3-211ENST00000475728 PRB4P10163 310 aaPredicted RBP10.38□□□□□ -0.75
ABCF3-211ENST00000475728 EIF5AP63241 154 aaKnown RBP10.38□□□□□ -0.75
ABCF3-211ENST00000475728 Q6ZNX1 250 aa10.38□□□□□ -0.75
ABCF3-211ENST00000475728 NIPSNAP3BQ9BS92 247 aa10.38□□□□□ -0.75
ABCF3-211ENST00000475728 AGPAT4-IT1Q9H0P7 198 aa10.38□□□□□ -0.75
ABCF3-211ENST00000475728 CSMD3Q7Z407 3707 aa10.37□□□□□ -0.75
ABCF3-211ENST00000475728 IGKV2-40A0A087WW87 121 aaPredicted RBP10.37□□□□□ -0.75
ABCF3-211ENST00000475728 TRAV10A0A0B4J240 114 aa10.37□□□□□ -0.75
ABCF3-211ENST00000475728 PGPA6NDG6 321 aa10.37□□□□□ -0.75
ABCF3-211ENST00000475728 ZNF705GA8MUZ8 300 aaPredicted RBP10.37□□□□□ -0.75
ABCF3-211ENST00000475728 HMGB3O15347 200 aaKnown RBP10.37□□□□□ -0.75
ABCF3-211ENST00000475728 IGKV2D-40P01614 121 aaPredicted RBP10.37□□□□□ -0.75
ABCF3-211ENST00000475728 GCHFRP30047 84 aa10.37□□□□□ -0.75
ABCF3-211ENST00000475728 ZNF138P52744 262 aa10.37□□□□□ -0.75
ABCF3-211ENST00000475728 TCTAP57738 103 aa10.37□□□□□ -0.75
ABCF3-211ENST00000475728 ERCC8Q13216 396 aa10.37□□□□□ -0.75
ABCF3-211ENST00000475728 GFI1BQ5VTD9 330 aa10.37□□□□□ -0.75
ABCF3-211ENST00000475728 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
ABCF3-211ENST00000475728 CCDC28AQ8IWP9 274 aa10.37□□□□□ -0.75
ABCF3-211ENST00000475728 CYTL1Q9NRR1 136 aa10.37□□□□□ -0.75
ABCF3-211ENST00000475728 LYSTQ99698 3801 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 LCE6AA0A183 80 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 CTXND1A0A1B0GTU2 59 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 EIF3GO75821 320 aaKnown RBP eCLIP10.36□□□□□ -0.75
ABCF3-211ENST00000475728 CRISP2P16562 243 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 TCTE3Q8IZS6 198 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 OR11H4Q8NGC9 324 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 C2CD4CQ8TF44 421 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 C16orf74Q96GX8 76 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 HYLS1Q96M11 299 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 CELA1Q9UNI1 258 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 YTHDF2Q9Y5A9 579 aaKnown RBP10.36□□□□□ -0.75
ABCF3-211ENST00000475728 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
ABCF3-211ENST00000475728 C7orf71A4D174 169 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 LYRM9A8MSI8 78 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 KLLNB2CW77 178 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 DIRC3C9JPN6 131 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 BCL2L11O43521 198 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 PFDN1O60925 122 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 GPX1P07203 203 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 C12orf74Q32Q52 190 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 FAM222AQ5U5X8 452 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 Q6ZTC4 211 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 SUN5Q8TC36 379 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 FAM19A4Q96LR4 140 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 VGLL1Q99990 258 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 PYGO2Q9BRQ0 406 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 ZNF471Q9BX82 626 aaPredicted RBP10.35□□□□□ -0.75
ABCF3-211ENST00000475728 ZNF492Q9P255 531 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 LENEPQ9Y5L5 61 aa10.35□□□□□ -0.75
ABCF3-211ENST00000475728 TRAV12-3A0A0B4J271 114 aa10.34□□□□□ -0.75
ABCF3-211ENST00000475728 SERTM2A0A1B0GWG4 89 aa10.34□□□□□ -0.75
ABCF3-211ENST00000475728 UMAD1C9J7I0 102 aa10.34□□□□□ -0.75
ABCF3-211ENST00000475728 J3KRW8 73 aa10.34□□□□□ -0.75
ABCF3-211ENST00000475728 K7EQM0 130 aa10.34□□□□□ -0.75
ABCF3-211ENST00000475728 SEC11BP0C7V7 166 aa10.34□□□□□ -0.75
ABCF3-211ENST00000475728 HTN1P15515 57 aa10.34□□□□□ -0.75
ABCF3-211ENST00000475728 IQCF2Q8IXL9 164 aa10.34□□□□□ -0.75
ABCF3-211ENST00000475728 TMEM263Q8WUH6 116 aaKnown RBP10.34□□□□□ -0.75
ABCF3-211ENST00000475728 TMED6Q8WW62 240 aa10.34□□□□□ -0.75
ABCF3-211ENST00000475728 ST6GAL2Q96JF0 529 aa10.34□□□□□ -0.75
ABCF3-211ENST00000475728 RNASE4P34096 147 aaKnown RBP10.33□□□□□ -0.76
ABCF3-211ENST00000475728 DAD1P61803 113 aa10.33□□□□□ -0.76
ABCF3-211ENST00000475728 KIR3DS1Q14943 382 aa10.33□□□□□ -0.76
ABCF3-211ENST00000475728 TMUB2Q71RG4 321 aa10.33□□□□□ -0.76
ABCF3-211ENST00000475728 C5orf17Q8NAS9 161 aa10.33□□□□□ -0.76
ABCF3-211ENST00000475728 STOML3Q8TAV4 291 aa10.33□□□□□ -0.76
ABCF3-211ENST00000475728 TIMM8BQ9Y5J9 83 aaPredicted RBP10.33□□□□□ -0.76
ABCF3-211ENST00000475728 DEFB131BA0A096LNP1 70 aa10.32□□□□□ -0.76
ABCF3-211ENST00000475728 TPT1P13693 172 aaKnown RBP10.32□□□□□ -0.76
ABCF3-211ENST00000475728 GOLT1AQ6ZVE7 132 aa10.32□□□□□ -0.76
ABCF3-211ENST00000475728 AKAP14Q86UN6 197 aa10.32□□□□□ -0.76
ABCF3-211ENST00000475728 ZFAND2AQ8N6M9 145 aa10.32□□□□□ -0.76
ABCF3-211ENST00000475728 LINC00467Q9BRT7 94 aa10.32□□□□□ -0.76
ABCF3-211ENST00000475728 NKX6-2Q9C056 277 aaPredicted RBP10.32□□□□□ -0.76
ABCF3-211ENST00000475728 RPH3ALQ9UNE2 315 aa10.32□□□□□ -0.76
ABCF3-211ENST00000475728 HYDINQ4G0P3 5121 aa10.32□□□□□ -0.76
ABCF3-211ENST00000475728 A0A1W2PRE2 83 aa10.31□□□□□ -0.76
ABCF3-211ENST00000475728 MAP1LC3B2A6NCE7 125 aa10.31□□□□□ -0.76
ABCF3-211ENST00000475728 IGLL5B9A064 214 aa10.31□□□□□ -0.76
ABCF3-211ENST00000475728 C1QBP02746 253 aa10.31□□□□□ -0.76
ABCF3-211ENST00000475728 AZU1P20160 251 aa10.31□□□□□ -0.76
ABCF3-211ENST00000475728 ZNF726P1Q15940 193 aa10.31□□□□□ -0.76
ABCF3-211ENST00000475728 EIF5AL1Q6IS14 154 aaKnown RBP10.31□□□□□ -0.76
ABCF3-211ENST00000475728 ZNF767PQ75MW2 155 aa10.31□□□□□ -0.76
ABCF3-211ENST00000475728 ZNF680Q8NEM1 530 aa10.31□□□□□ -0.76
ABCF3-211ENST00000475728 Q8TAT8 98 aa10.31□□□□□ -0.76
ABCF3-211ENST00000475728 RNASE8Q8TDE3 154 aaKnown RBP10.31□□□□□ -0.76
ABCF3-211ENST00000475728 MAP1LC3BQ9GZQ8 125 aa10.31□□□□□ -0.76
ABCF3-211ENST00000475728 FBLL1A6NHQ2 334 aaKnown RBP10.3□□□□□ -0.76
ABCF3-211ENST00000475728 SNURFLB1AK76 121 aa10.3□□□□□ -0.76
ABCF3-211ENST00000475728 ZNF324O75467 553 aaPredicted RBP10.3□□□□□ -0.76
ABCF3-211ENST00000475728 SUMO1P63165 101 aaKnown RBP10.3□□□□□ -0.76
ABCF3-211ENST00000475728 CD300CQ08708 224 aa10.3□□□□□ -0.76
ABCF3-211ENST00000475728 BTN1A1Q13410 526 aa10.3□□□□□ -0.76
ABCF3-211ENST00000475728 DPPA3Q6W0C5 159 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms