RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	OR2T35	Q8NGX2	323 aa		11.72	□□□□□ -0.53
VPS8-222	ENST00000475580	OR2G3	Q8NGZ4	309 aa		11.72	□□□□□ -0.53
VPS8-222	ENST00000475580	C16orf74	Q96GX8	76 aa		11.72	□□□□□ -0.53
VPS8-222	ENST00000475580		Q9H3A6	140 aa		11.72	□□□□□ -0.53
VPS8-222	ENST00000475580	TNFSF18	Q9UNG2	199 aa		11.72	□□□□□ -0.53
VPS8-222	ENST00000475580	BIRC6	Q9NR09	4857 aa		11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	TRAV12-3	A0A0B4J271	114 aa		11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	SLC25A5	P05141	298 aa	Known RBP	11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	CRISP2	P16562	243 aa		11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	ATP6V0C	P27449	155 aa		11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	RAN	P62826	216 aa	Known RBP	11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	LYPD1	Q8N2G4	141 aa		11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	OR10G4	Q8NGN3	311 aa		11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	OR10G9	Q8NGN4	311 aa		11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	OR10G7	Q8NGN6	311 aa		11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	TMEM263	Q8WUH6	116 aa	Known RBP	11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	PSMG3	Q9BT73	122 aa	Predicted RBP	11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	NDUFAF3	Q9BU61	184 aa		11.71	□□□□□ -0.53
VPS8-222	ENST00000475580	DNAH10	Q8IVF4	4471 aa		11.71	□□□□□ -0.54
VPS8-222	ENST00000475580	FXYD6-FXYD2	A0A087WZ82	144 aa		11.7	□□□□□ -0.54
VPS8-222	ENST00000475580	DEFB130B	P0DP73	79 aa		11.7	□□□□□ -0.54
VPS8-222	ENST00000475580	DEFB130A	P0DP74	79 aa		11.7	□□□□□ -0.54
VPS8-222	ENST00000475580	HTN3	P15516	51 aa		11.7	□□□□□ -0.54
VPS8-222	ENST00000475580	CD300C	Q08708	224 aa		11.7	□□□□□ -0.54
VPS8-222	ENST00000475580	PRR9	Q5T870	116 aa		11.7	□□□□□ -0.54
VPS8-222	ENST00000475580	ZNF493	Q6ZR52	646 aa		11.7	□□□□□ -0.54
VPS8-222	ENST00000475580	ZFAND2A	Q8N6M9	145 aa		11.7	□□□□□ -0.54
VPS8-222	ENST00000475580	ZNF492	Q9P255	531 aa		11.7	□□□□□ -0.54
VPS8-222	ENST00000475580	C7orf71	A4D174	169 aa		11.69	□□□□□ -0.54
VPS8-222	ENST00000475580	HMGB3	O15347	200 aa	Known RBP	11.69	□□□□□ -0.54
VPS8-222	ENST00000475580	ZNF324	O75467	553 aa	Predicted RBP	11.69	□□□□□ -0.54
VPS8-222	ENST00000475580	BTN1A1	Q13410	526 aa		11.69	□□□□□ -0.54
VPS8-222	ENST00000475580	RPL7L1	Q6DKI1	246 aa	Known RBP	11.69	□□□□□ -0.54
VPS8-222	ENST00000475580	PQLC2	Q6ZP29	291 aa		11.69	□□□□□ -0.54
VPS8-222	ENST00000475580	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.69	□□□□□ -0.54
VPS8-222	ENST00000475580	FAM210B	Q96KR6	192 aa		11.69	□□□□□ -0.54
VPS8-222	ENST00000475580	SH3BGRL3	Q9H299	93 aa		11.69	□□□□□ -0.54
VPS8-222	ENST00000475580	NOP10	Q9NPE3	64 aa	Known RBP	11.69	□□□□□ -0.54
VPS8-222	ENST00000475580	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.69	□□□□□ -0.54
VPS8-222	ENST00000475580		A0A1W2PPV4	95 aa		11.68	□□□□□ -0.54
VPS8-222	ENST00000475580	RBAKDN	A6NC62	111 aa		11.68	□□□□□ -0.54
VPS8-222	ENST00000475580	NMB	P08949	121 aa		11.68	□□□□□ -0.54
VPS8-222	ENST00000475580	TMEM78	Q5T7P6	136 aa		11.68	□□□□□ -0.54
VPS8-222	ENST00000475580		Q8TAT8	98 aa		11.68	□□□□□ -0.54
VPS8-222	ENST00000475580	PYGO2	Q9BRQ0	406 aa		11.68	□□□□□ -0.54
VPS8-222	ENST00000475580	DIRC3	C9JPN6	131 aa		11.67	□□□□□ -0.54
VPS8-222	ENST00000475580	STAG3L2	P0CL84	134 aa		11.67	□□□□□ -0.54
VPS8-222	ENST00000475580	STAG3L3	P0CL85	134 aa		11.67	□□□□□ -0.54
VPS8-222	ENST00000475580	RNASE4	P34096	147 aa	Known RBP	11.67	□□□□□ -0.54
VPS8-222	ENST00000475580	CDC34	P49427	236 aa	Predicted RBP	11.67	□□□□□ -0.54
VPS8-222	ENST00000475580	ZNF138	P52744	262 aa		11.67	□□□□□ -0.54
VPS8-222	ENST00000475580	SERF2	P84101	59 aa		11.67	□□□□□ -0.54
VPS8-222	ENST00000475580	TMEM88	Q6PEY1	159 aa		11.67	□□□□□ -0.54
VPS8-222	ENST00000475580		Q6ZQT7	251 aa		11.67	□□□□□ -0.54
VPS8-222	ENST00000475580	LINC00612	Q8N6U2	182 aa		11.67	□□□□□ -0.54
VPS8-222	ENST00000475580	LINC00467	Q9BRT7	94 aa		11.67	□□□□□ -0.54
VPS8-222	ENST00000475580	OTOR	Q9NRC9	128 aa		11.67	□□□□□ -0.54
VPS8-222	ENST00000475580	TRBV7-9	A0A0J9YWB2	115 aa		11.66	□□□□□ -0.54
VPS8-222	ENST00000475580	SMLR1	H3BR10	107 aa		11.66	□□□□□ -0.54
VPS8-222	ENST00000475580	ARL14EPL	P0DKL9	152 aa		11.66	□□□□□ -0.54
VPS8-222	ENST00000475580	CSN1S1	P47710	185 aa		11.66	□□□□□ -0.54
VPS8-222	ENST00000475580	CCDC28A	Q8IWP9	274 aa		11.66	□□□□□ -0.54
VPS8-222	ENST00000475580	RAB24	Q969Q5	203 aa		11.66	□□□□□ -0.54
VPS8-222	ENST00000475580	PGP	A6NDG6	321 aa		11.65	□□□□□ -0.54
VPS8-222	ENST00000475580	CBY3	A6NI87	242 aa		11.65	□□□□□ -0.54
VPS8-222	ENST00000475580	GPX1	P07203	203 aa		11.65	□□□□□ -0.54
VPS8-222	ENST00000475580	SSX7	Q7RTT5	188 aa		11.65	□□□□□ -0.54
VPS8-222	ENST00000475580	C11orf72	Q8NBR9	251 aa		11.65	□□□□□ -0.54
VPS8-222	ENST00000475580	SUN5	Q8TC36	379 aa		11.65	□□□□□ -0.54
VPS8-222	ENST00000475580	RXFP4	Q8TDU9	374 aa		11.65	□□□□□ -0.54
VPS8-222	ENST00000475580	HYLS1	Q96M11	299 aa		11.65	□□□□□ -0.54
VPS8-222	ENST00000475580	MB	P02144	154 aa		11.64	□□□□□ -0.55
VPS8-222	ENST00000475580		P0DMU3	169 aa		11.64	□□□□□ -0.55
VPS8-222	ENST00000475580	FAM231A	P0DMU4	169 aa		11.64	□□□□□ -0.55
VPS8-222	ENST00000475580	FAM231C	P0DMU5	169 aa		11.64	□□□□□ -0.55
VPS8-222	ENST00000475580	ANXA2R	Q3ZCQ2	193 aa		11.64	□□□□□ -0.55
VPS8-222	ENST00000475580	CYTL1	Q9NRR1	136 aa		11.64	□□□□□ -0.55
VPS8-222	ENST00000475580	FRAS1	Q86XX4	4008 aa		11.63	□□□□□ -0.55
VPS8-222	ENST00000475580	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.63	□□□□□ -0.55
VPS8-222	ENST00000475580	ARPC5	O15511	151 aa		11.63	□□□□□ -0.55
VPS8-222	ENST00000475580	ATP5G1	P05496	136 aa		11.63	□□□□□ -0.55
VPS8-222	ENST00000475580	ATP5G3	P48201	142 aa		11.63	□□□□□ -0.55
VPS8-222	ENST00000475580	DAZ2	Q13117	558 aa	Known RBP	11.63	□□□□□ -0.55
VPS8-222	ENST00000475580	EIF4E3	Q8N5X7	224 aa	Known RBP	11.63	□□□□□ -0.55
VPS8-222	ENST00000475580	ARL6IP6	Q8N6S5	226 aa		11.63	□□□□□ -0.55
VPS8-222	ENST00000475580	POM121L12	Q8N7R1	296 aa		11.63	□□□□□ -0.55
VPS8-222	ENST00000475580	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.63	□□□□□ -0.55
VPS8-222	ENST00000475580	SNURFL	B1AK76	121 aa		11.62	□□□□□ -0.55
VPS8-222	ENST00000475580		F5H768	121 aa		11.62	□□□□□ -0.55
VPS8-222	ENST00000475580	GCHFR	P30047	84 aa		11.62	□□□□□ -0.55
VPS8-222	ENST00000475580	GNG5	P63218	68 aa		11.62	□□□□□ -0.55
VPS8-222	ENST00000475580	ZNF726P1	Q15940	193 aa		11.62	□□□□□ -0.55
VPS8-222	ENST00000475580	GOLT1A	Q6ZVE7	132 aa		11.62	□□□□□ -0.55
VPS8-222	ENST00000475580	TMED6	Q8WW62	240 aa		11.62	□□□□□ -0.55
VPS8-222	ENST00000475580	GSN-AS1	Q9NRJ2	163 aa		11.62	□□□□□ -0.55
VPS8-222	ENST00000475580	TP53TG3	Q9ULZ0	132 aa		11.62	□□□□□ -0.55
VPS8-222	ENST00000475580	RPH3AL	Q9UNE2	315 aa		11.62	□□□□□ -0.55
VPS8-222	ENST00000475580	LENEP	Q9Y5L5	61 aa		11.62	□□□□□ -0.55
VPS8-222	ENST00000475580	GAGE12B	A1L429	117 aa		11.61	□□□□□ -0.55
VPS8-222	ENST00000475580	GAGE7	O76087	117 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms