RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 A8MWP6 167 aa11.76□□□□□ -0.53
RPUSD3-215ENST00000475470 SMAD7O15105 426 aaKnown RBP11.76□□□□□ -0.53
RPUSD3-215ENST00000475470 SH2D1AO60880 128 aa11.76□□□□□ -0.53
RPUSD3-215ENST00000475470 ERCC8Q13216 396 aa11.76□□□□□ -0.53
RPUSD3-215ENST00000475470 PEF1Q9UBV8 284 aaKnown RBP11.76□□□□□ -0.53
RPUSD3-215ENST00000475470 ZANQ9Y493 2812 aa11.76□□□□□ -0.53
RPUSD3-215ENST00000475470 A0A1B0GV90 55 aa11.76□□□□□ -0.53
RPUSD3-215ENST00000475470 A0A1W2PS18 150 aa11.76□□□□□ -0.53
RPUSD3-215ENST00000475470 RBAKDNA6NC62 111 aa11.76□□□□□ -0.53
RPUSD3-215ENST00000475470 C16orf92Q96LL3 132 aa11.76□□□□□ -0.53
RPUSD3-215ENST00000475470 DOPEY2Q9Y3R5 2298 aa11.75□□□□□ -0.53
RPUSD3-215ENST00000475470 TMEM189A5PLL7 270 aa11.75□□□□□ -0.53
RPUSD3-215ENST00000475470 ESDP10768 282 aa11.75□□□□□ -0.53
RPUSD3-215ENST00000475470 LINC00310P59036 64 aa11.75□□□□□ -0.53
RPUSD3-215ENST00000475470 MRPL53Q96EL3 112 aaKnown RBP11.75□□□□□ -0.53
RPUSD3-215ENST00000475470 PSMG3-AS1Q96PY0 264 aa11.75□□□□□ -0.53
RPUSD3-215ENST00000475470 BMI1P35226 326 aa11.75□□□□□ -0.53
RPUSD3-215ENST00000475470 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
RPUSD3-215ENST00000475470 APCP25054 2843 aa11.74□□□□□ -0.53
RPUSD3-215ENST00000475470 TMEM89A2RUT3 159 aa11.74□□□□□ -0.53
RPUSD3-215ENST00000475470 HAX1O00165 279 aa11.74□□□□□ -0.53
RPUSD3-215ENST00000475470 PAFAH1B2P68402 229 aa11.74□□□□□ -0.53
RPUSD3-215ENST00000475470 WFDC11Q8NEX6 87 aa11.74□□□□□ -0.53
RPUSD3-215ENST00000475470 TPPP3Q9BW30 176 aa11.74□□□□□ -0.53
RPUSD3-215ENST00000475470 CLEC5AQ9NY25 188 aa11.74□□□□□ -0.53
RPUSD3-215ENST00000475470 A0A1B0GUT8 65 aa11.74□□□□□ -0.53
RPUSD3-215ENST00000475470 SCGB1D1O95968 90 aa11.74□□□□□ -0.53
RPUSD3-215ENST00000475470 Q6AWC8 147 aa11.74□□□□□ -0.53
RPUSD3-215ENST00000475470 TMSB15BA0A087X1C1 80 aa11.73□□□□□ -0.53
RPUSD3-215ENST00000475470 ZNF80P51504 273 aaPredicted RBP11.73□□□□□ -0.53
RPUSD3-215ENST00000475470 FAM106AQ4KMX7 169 aa11.73□□□□□ -0.53
RPUSD3-215ENST00000475470 PRR31Q5SQ13 230 aa11.73□□□□□ -0.53
RPUSD3-215ENST00000475470 SAMD10Q9BYL1 202 aa11.73□□□□□ -0.53
RPUSD3-215ENST00000475470 DAZ1Q9NQZ3 744 aaKnown RBP11.73□□□□□ -0.53
RPUSD3-215ENST00000475470 CHD6Q8TD26 2715 aa11.73□□□□□ -0.53
RPUSD3-215ENST00000475470 RPL11P62913 178 aaKnown RBP11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 RIGQ13278 110 aa11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 TM4SF20Q53R12 229 aa11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 BORCS7Q96B45 105 aa11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 ZNF702PQ9H963 129 aa11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 IGHV7-4-1A0A0J9YVY3 117 aa11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 ARMS2P0C7Q2 107 aa11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 TMEM78Q5T7P6 136 aa11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 C18orf32Q8TCD1 76 aa11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 ALKBH7Q9BT30 221 aaPredicted RBP11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 AGPAT4-IT1Q9H0P7 198 aa11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 TENM4Q6N022 2769 aa11.72□□□□□ -0.53
RPUSD3-215ENST00000475470 IL17RELQ6ZVW7 336 aa11.71□□□□□ -0.53
RPUSD3-215ENST00000475470 RCHY1Q96PM5 261 aa11.71□□□□□ -0.53
RPUSD3-215ENST00000475470 RHPN1-AS1Q9BWJ2 59 aa11.71□□□□□ -0.53
RPUSD3-215ENST00000475470 CREBBPQ92793 2442 aa11.71□□□□□ -0.53
RPUSD3-215ENST00000475470 FABP5P3A8MUU1 101 aa11.71□□□□□ -0.54
RPUSD3-215ENST00000475470 RPLP1P05386 114 aaKnown RBP11.71□□□□□ -0.54
RPUSD3-215ENST00000475470 ZNF738Q8NE65 137 aa11.71□□□□□ -0.54
RPUSD3-215ENST00000475470 KMT2BQ9UMN6 2715 aaPredicted RBP11.71□□□□□ -0.54
RPUSD3-215ENST00000475470 CD33P20138 364 aa11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 ZNF138P52744 262 aa11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 RPS20P60866 119 aaKnown RBP11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 IQCJQ1A5X6 159 aa11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 GPHB5Q86YW7 130 aa11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 KCNS1Q96KK3 526 aa11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 DUX5Q96PT3 197 aa11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 A0A1B0GW15 77 aa11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 K7EMT4 169 aa11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 FOXE3Q13461 319 aa11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 KLF5Q13887 457 aaPredicted RBP11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 SIGLECL1Q8N7X8 197 aa11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 NRN1Q9NPD7 142 aa11.7□□□□□ -0.54
RPUSD3-215ENST00000475470 ORM1P02763 201 aa11.69□□□□□ -0.54
RPUSD3-215ENST00000475470 ELANEP08246 267 aa11.69□□□□□ -0.54
RPUSD3-215ENST00000475470 LYZL1Q6UWQ5 148 aa11.69□□□□□ -0.54
RPUSD3-215ENST00000475470 C9orf47Q6ZRZ4 202 aa11.69□□□□□ -0.54
RPUSD3-215ENST00000475470 C20orf173Q96LM9 149 aa11.69□□□□□ -0.54
RPUSD3-215ENST00000475470 SMPXQ9UHP9 88 aa11.69□□□□□ -0.54
RPUSD3-215ENST00000475470 TEX29Q8N6K0 151 aa11.69□□□□□ -0.54
RPUSD3-215ENST00000475470 NDUFAF3Q9BU61 184 aa11.69□□□□□ -0.54
RPUSD3-215ENST00000475470 TEX15Q9BXT5 2789 aa11.68□□□□□ -0.54
RPUSD3-215ENST00000475470 IGKV3-7A0A075B6H7 116 aa11.68□□□□□ -0.54
RPUSD3-215ENST00000475470 GPX1P07203 203 aa11.68□□□□□ -0.54
RPUSD3-215ENST00000475470 SRSF2Q01130 221 aaKnown RBP11.68□□□□□ -0.54
RPUSD3-215ENST00000475470 NAGKQ9UJ70 344 aa11.68□□□□□ -0.54
RPUSD3-215ENST00000475470 UFC1Q9Y3C8 167 aa11.68□□□□□ -0.54
RPUSD3-215ENST00000475470 LOC102724200A0A096LPH7 203 aaPredicted RBP11.68□□□□□ -0.54
RPUSD3-215ENST00000475470 SOCS3O14543 225 aa11.68□□□□□ -0.54
RPUSD3-215ENST00000475470 ZNF705DP0CH99 300 aaPredicted RBP11.68□□□□□ -0.54
RPUSD3-215ENST00000475470 ZNF705BP0CI00 300 aaPredicted RBP11.68□□□□□ -0.54
RPUSD3-215ENST00000475470 AMTP48728 403 aa11.68□□□□□ -0.54
RPUSD3-215ENST00000475470 PMCHP20382 165 aa11.67□□□□□ -0.54
RPUSD3-215ENST00000475470 SSTP61278 116 aa11.67□□□□□ -0.54
RPUSD3-215ENST00000475470 Q6ZWC4 215 aa11.67□□□□□ -0.54
RPUSD3-215ENST00000475470 NBPF19A0A087WUL8 3843 aa11.67□□□□□ -0.54
RPUSD3-215ENST00000475470 FER1L6-AS1Q8NA97 138 aa11.67□□□□□ -0.54
RPUSD3-215ENST00000475470 SELENOKQ9Y6D0 94 aa11.67□□□□□ -0.54
RPUSD3-215ENST00000475470 OVOL1O14753 267 aa11.66□□□□□ -0.54
RPUSD3-215ENST00000475470 ZNF324O75467 553 aaPredicted RBP11.66□□□□□ -0.54
RPUSD3-215ENST00000475470 LGALS1P09382 135 aaKnown RBP11.66□□□□□ -0.54
RPUSD3-215ENST00000475470 EDN2P20800 178 aa11.66□□□□□ -0.54
RPUSD3-215ENST00000475470 OR10J6PQ8NGY7 276 aa11.66□□□□□ -0.54
RPUSD3-215ENST00000475470 PPP1R14DQ9NXH3 145 aa11.66□□□□□ -0.54
RPUSD3-215ENST00000475470 HIST1H1AQ02539 215 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms