RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 TMEM208Q9BTX3 173 aa9.95□□□□□ -0.82
ATG9A-220ENST00000475339 MDFICQ9P1T7 246 aa9.95□□□□□ -0.82
ATG9A-220ENST00000475339 RNF222A6NCQ9 220 aa9.94□□□□□ -0.82
ATG9A-220ENST00000475339 ZNF705FA8MVS1 300 aaPredicted RBP9.94□□□□□ -0.82
ATG9A-220ENST00000475339 SMLR1H3BR10 107 aa9.94□□□□□ -0.82
ATG9A-220ENST00000475339 PRB4P10163 310 aaPredicted RBP9.94□□□□□ -0.82
ATG9A-220ENST00000475339 RAB2AP61019 212 aa9.94□□□□□ -0.82
ATG9A-220ENST00000475339 SPINK13Q1W4C9 94 aa9.94□□□□□ -0.82
ATG9A-220ENST00000475339 FAM122CQ6P4D5 195 aa9.94□□□□□ -0.82
ATG9A-220ENST00000475339 PSMG3Q9BT73 122 aaPredicted RBP9.94□□□□□ -0.82
ATG9A-220ENST00000475339 PRELID1Q9Y255 219 aa9.94□□□□□ -0.82
ATG9A-220ENST00000475339 A8MTW9 85 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 M0R2Z0 102 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 MBP02144 154 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 NBEAP1P0C6P0 100 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 ATP6V0CP27449 155 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 XGP55808 180 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 AMTNQ6UX39 209 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 OR10G4Q8NGN3 311 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 OR10G9Q8NGN4 311 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 OR10G7Q8NGN6 311 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 OR2G3Q8NGZ4 309 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 RNF141Q8WVD5 230 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 FXYD5Q96DB9 178 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 GNPNAT1Q96EK6 184 aaPredicted RBP9.93□□□□□ -0.82
ATG9A-220ENST00000475339 MRPL53Q96EL3 112 aaKnown RBP9.93□□□□□ -0.82
ATG9A-220ENST00000475339 IGF2BP2-AS1Q96M15 143 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 RFNGQ9Y644 331 aa9.93□□□□□ -0.82
ATG9A-220ENST00000475339 NBDYA0A0U1RRE5 68 aa9.92□□□□□ -0.82
ATG9A-220ENST00000475339 G3V3Q6 166 aa9.92□□□□□ -0.82
ATG9A-220ENST00000475339 NDUFB4O95168 129 aa9.92□□□□□ -0.82
ATG9A-220ENST00000475339 RPL7L1Q6DKI1 246 aaKnown RBP9.92□□□□□ -0.82
ATG9A-220ENST00000475339 ZNF705AQ6ZN79 300 aaPredicted RBP9.92□□□□□ -0.82
ATG9A-220ENST00000475339 EXOC3-AS1Q8N2X6 119 aa9.92□□□□□ -0.82
ATG9A-220ENST00000475339 SMIM9A6NGZ8 99 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 PRAC2D3DTV9 90 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 M0R3E3 92 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 TAAR5O14804 337 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 HBE1P02100 147 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 TSPOP30536 169 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 CDC34P49427 236 aaPredicted RBP9.91□□□□□ -0.82
ATG9A-220ENST00000475339 SERF2P84101 59 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 ICAM4Q14773 271 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 PQLC2Q6ZP29 291 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 BAP18Q8IXM2 172 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 ZNF503Q96F45 646 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 PHYHIPLQ96FC7 376 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 NEU1Q99519 415 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 SH3BGRL3Q9H299 93 aa9.91□□□□□ -0.82
ATG9A-220ENST00000475339 TRAV12-2A0A075B6T6 113 aa9.9□□□□□ -0.82
ATG9A-220ENST00000475339 EIF3GO75821 320 aaKnown RBP eCLIP9.9□□□□□ -0.82
ATG9A-220ENST00000475339 CDKN1BP46527 198 aa9.9□□□□□ -0.82
ATG9A-220ENST00000475339 CSN1S1P47710 185 aa9.9□□□□□ -0.82
ATG9A-220ENST00000475339 EMP1P54849 157 aa9.9□□□□□ -0.82
ATG9A-220ENST00000475339 SERTAD4-AS1Q5TG53 156 aa9.9□□□□□ -0.82
ATG9A-220ENST00000475339 FAM210BQ96KR6 192 aa9.9□□□□□ -0.82
ATG9A-220ENST00000475339 TMEM189A5PLL7 270 aa9.89□□□□□ -0.83
ATG9A-220ENST00000475339 NPIPB6E9PJ23 425 aa9.89□□□□□ -0.83
ATG9A-220ENST00000475339 HMGB3O15347 200 aaKnown RBP9.89□□□□□ -0.83
ATG9A-220ENST00000475339 LEPP41159 167 aa9.89□□□□□ -0.83
ATG9A-220ENST00000475339 RANP62826 216 aaKnown RBP9.89□□□□□ -0.83
ATG9A-220ENST00000475339 ZNF345Q14585 488 aa9.89□□□□□ -0.83
ATG9A-220ENST00000475339 RRN3P1Q2M238 152 aa9.89□□□□□ -0.83
ATG9A-220ENST00000475339 C1orf158Q8N1D5 194 aa9.89□□□□□ -0.83
ATG9A-220ENST00000475339 ARPC5LQ9BPX5 153 aa9.89□□□□□ -0.83
ATG9A-220ENST00000475339 LOC102723971A0A1B0GUV8 181 aa9.88□□□□□ -0.83
ATG9A-220ENST00000475339 CRXO43186 299 aaPredicted RBP9.88□□□□□ -0.83
ATG9A-220ENST00000475339 SMR3BP02814 79 aaPredicted RBP9.88□□□□□ -0.83
ATG9A-220ENST00000475339 FAM74A1Q5RGS3 127 aa9.88□□□□□ -0.83
ATG9A-220ENST00000475339 AKR1C8PQ5T2L2 129 aa9.88□□□□□ -0.83
ATG9A-220ENST00000475339 TMEM256Q8N2U0 113 aa9.88□□□□□ -0.83
ATG9A-220ENST00000475339 ODF3Q96PU9 254 aa9.88□□□□□ -0.83
ATG9A-220ENST00000475339 ACTR3CQ9C0K3 210 aaPredicted RBP9.88□□□□□ -0.83
ATG9A-220ENST00000475339 Q9H3A6 140 aa9.88□□□□□ -0.83
ATG9A-220ENST00000475339 IGKV2-40A0A087WW87 121 aaPredicted RBP9.87□□□□□ -0.83
ATG9A-220ENST00000475339 KANTRA0A1W2PQU2 76 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 HMSDA8MTL9 139 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 J3KRW8 73 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 IGKV2D-40P01614 121 aaPredicted RBP9.87□□□□□ -0.83
ATG9A-220ENST00000475339 ARL14EPLP0DKL9 152 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 FAM3BP58499 235 aaPredicted RBP9.87□□□□□ -0.83
ATG9A-220ENST00000475339 ERCC8Q13216 396 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 TMEM78Q5T7P6 136 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 IQCF2Q8IXL9 164 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 KCNRGQ8N5I3 272 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 SYT8Q8NBV8 401 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 CMTM2Q8TAZ6 248 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 RAB24Q969Q5 203 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 LINC01587Q99440 93 aa9.87□□□□□ -0.83
ATG9A-220ENST00000475339 A0A0D9SG52 128 aa9.86□□□□□ -0.83
ATG9A-220ENST00000475339 TEX48A0A1B0GUV7 120 aa9.86□□□□□ -0.83
ATG9A-220ENST00000475339 PFDN1O60925 122 aa9.86□□□□□ -0.83
ATG9A-220ENST00000475339 CT45A10P0DMU9 189 aa9.86□□□□□ -0.83
ATG9A-220ENST00000475339 OR11H4Q8NGC9 324 aa9.86□□□□□ -0.83
ATG9A-220ENST00000475339 ZNRF2Q8NHG8 242 aa9.86□□□□□ -0.83
ATG9A-220ENST00000475339 RXFP4Q8TDU9 374 aa9.86□□□□□ -0.83
ATG9A-220ENST00000475339 HYLS1Q96M11 299 aa9.86□□□□□ -0.83
ATG9A-220ENST00000475339 LINC00477Q96M19 166 aa9.86□□□□□ -0.83
ATG9A-220ENST00000475339 OTORQ9NRC9 128 aa9.86□□□□□ -0.83
ATG9A-220ENST00000475339 RPH3ALQ9UNE2 315 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms