RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 NDFIP1Q9BT67 221 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 RNASE7Q9H1E1 156 aaKnown RBP10.36□□□□□ -0.75
TRAF4-210ENST00000475329 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
TRAF4-210ENST00000475329 OVOL1O14753 267 aa10.35□□□□□ -0.75
TRAF4-210ENST00000475329 KRTAP10-3P60369 221 aa10.35□□□□□ -0.75
TRAF4-210ENST00000475329 PAFAH1B2P68402 229 aa10.35□□□□□ -0.75
TRAF4-210ENST00000475329 ELOBQ15370 118 aa10.35□□□□□ -0.75
TRAF4-210ENST00000475329 SAPCD1Q5SSQ6 148 aa10.35□□□□□ -0.75
TRAF4-210ENST00000475329 WFDC3Q8IUB2 231 aa10.35□□□□□ -0.75
TRAF4-210ENST00000475329 IMMP2LQ96T52 175 aa10.35□□□□□ -0.75
TRAF4-210ENST00000475329 V9GYV3 84 aa10.35□□□□□ -0.75
TRAF4-210ENST00000475329 CUBNO60494 3623 aa10.34□□□□□ -0.75
TRAF4-210ENST00000475329 K7EQG2 157 aa10.34□□□□□ -0.75
TRAF4-210ENST00000475329 GATCO43716 136 aaKnown RBP10.34□□□□□ -0.75
TRAF4-210ENST00000475329 CT45A10P0DMU9 189 aa10.34□□□□□ -0.75
TRAF4-210ENST00000475329 TFPI2P48307 235 aa10.34□□□□□ -0.75
TRAF4-210ENST00000475329 TMEM78Q5T7P6 136 aa10.34□□□□□ -0.75
TRAF4-210ENST00000475329 C9orf47Q6ZRZ4 202 aa10.34□□□□□ -0.75
TRAF4-210ENST00000475329 OR10J6PQ8NGY7 276 aa10.34□□□□□ -0.75
TRAF4-210ENST00000475329 Q8TAT8 98 aa10.34□□□□□ -0.75
TRAF4-210ENST00000475329 ZC2HC1AQ96GY0 325 aa10.34□□□□□ -0.75
TRAF4-210ENST00000475329 PRR25Q96S07 402 aa10.34□□□□□ -0.75
TRAF4-210ENST00000475329 IL36BQ9NZH7 164 aa10.34□□□□□ -0.75
TRAF4-210ENST00000475329 TRAV2A0A0B4J234 112 aa10.33□□□□□ -0.76
TRAF4-210ENST00000475329 ZNF705GA8MUZ8 300 aaPredicted RBP10.33□□□□□ -0.76
TRAF4-210ENST00000475329 PFN1P07737 140 aaKnown RBP10.33□□□□□ -0.76
TRAF4-210ENST00000475329 SNRPD3P62318 126 aaKnown RBP10.33□□□□□ -0.76
TRAF4-210ENST00000475329 ERCC8Q13216 396 aa10.33□□□□□ -0.76
TRAF4-210ENST00000475329 NUDT10Q8NFP7 164 aa10.33□□□□□ -0.76
TRAF4-210ENST00000475329 DAZAP1Q96EP5 407 aaKnown RBP10.33□□□□□ -0.76
TRAF4-210ENST00000475329 NUDT11Q96G61 164 aa10.33□□□□□ -0.76
TRAF4-210ENST00000475329 C8orf49Q96NF6 230 aa10.33□□□□□ -0.76
TRAF4-210ENST00000475329 ASCL2Q99929 193 aa10.33□□□□□ -0.76
TRAF4-210ENST00000475329 TRBV24-1A0A075B6N3 115 aa10.32□□□□□ -0.76
TRAF4-210ENST00000475329 TGIF2-C20orf24A0A0A6YYL0 155 aa10.32□□□□□ -0.76
TRAF4-210ENST00000475329 C19orf71A6NCJ1 209 aa10.32□□□□□ -0.76
TRAF4-210ENST00000475329 NPIPB6E9PJ23 425 aa10.32□□□□□ -0.76
TRAF4-210ENST00000475329 P01737 135 aa10.32□□□□□ -0.76
TRAF4-210ENST00000475329 ZNF138P52744 262 aa10.32□□□□□ -0.76
TRAF4-210ENST00000475329 RBPMS2Q6ZRY4 209 aaKnown RBP10.32□□□□□ -0.76
TRAF4-210ENST00000475329 COX8CQ7Z4L0 72 aa10.32□□□□□ -0.76
TRAF4-210ENST00000475329 BTF3L4Q96K17 158 aa10.32□□□□□ -0.76
TRAF4-210ENST00000475329 AGPAT4-IT1Q9H0P7 198 aa10.32□□□□□ -0.76
TRAF4-210ENST00000475329 RPP21Q9H633 154 aaKnown RBP10.32□□□□□ -0.76
TRAF4-210ENST00000475329 SIGLEC8Q9NYZ4 499 aa10.32□□□□□ -0.76
TRAF4-210ENST00000475329 TMA7Q9Y2S6 64 aaKnown RBP10.32□□□□□ -0.76
TRAF4-210ENST00000475329 TRAV9-1A0A075B6T8 112 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 A0A1W2PPQ1 181 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 CXCL1P09341 107 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 ZNF688P0C7X2 276 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 RAB5AP20339 215 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 DEFB114Q30KQ6 69 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 SMUG1Q53HV7 270 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 LINC00322Q6ZN03 302 aaPredicted RBP10.31□□□□□ -0.76
TRAF4-210ENST00000475329 TMEM61Q8N0U2 210 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 OR4B1Q8NGF8 309 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 OR8A1Q8NGG7 326 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 GPR61Q9BZJ8 451 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 PPP1R14DQ9NXH3 145 aa10.31□□□□□ -0.76
TRAF4-210ENST00000475329 NIPBLQ6KC79 2804 aaeCLIP10.31□□□□□ -0.762e-8■■■□□ 17.1
TRAF4-210ENST00000475329 WNK1Q9H4A3 2382 aa10.3□□□□□ -0.76
TRAF4-210ENST00000475329 TRAV25A0A0B4J276 109 aa10.3□□□□□ -0.76
TRAF4-210ENST00000475329 PF4P02776 101 aa10.3□□□□□ -0.76
TRAF4-210ENST00000475329 FAM3BP58499 235 aaPredicted RBP10.3□□□□□ -0.76
TRAF4-210ENST00000475329 HIST1H1AQ02539 215 aaPredicted RBP10.3□□□□□ -0.76
TRAF4-210ENST00000475329 CT83Q5H943 113 aa10.3□□□□□ -0.76
TRAF4-210ENST00000475329 PSMG4Q5JS54 123 aa10.3□□□□□ -0.76
TRAF4-210ENST00000475329 FAM162BQ5T6X4 162 aa10.3□□□□□ -0.76
TRAF4-210ENST00000475329 FAM210BQ96KR6 192 aa10.3□□□□□ -0.76
TRAF4-210ENST00000475329 LINC00477Q96M19 166 aa10.3□□□□□ -0.76
TRAF4-210ENST00000475329 PYGO2Q9BRQ0 406 aa10.3□□□□□ -0.76
TRAF4-210ENST00000475329 LENEPQ9Y5L5 61 aa10.3□□□□□ -0.76
TRAF4-210ENST00000475329 SMIM27A0A1W2PRY6 76 aa10.29□□□□□ -0.76
TRAF4-210ENST00000475329 SH2D1AO60880 128 aa10.29□□□□□ -0.76
TRAF4-210ENST00000475329 ZNF705DP0CH99 300 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-210ENST00000475329 ZNF705BP0CI00 300 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-210ENST00000475329 CD300EQ496F6 205 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-210ENST00000475329 SPAG8Q99932 426 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-210ENST00000475329 OR4C46A6NHA9 309 aa10.28□□□□□ -0.76
TRAF4-210ENST00000475329 A8MWL6 223 aa10.28□□□□□ -0.76
TRAF4-210ENST00000475329 F6UB75 175 aa10.28□□□□□ -0.76
TRAF4-210ENST00000475329 CA1P00915 261 aaPredicted RBP10.28□□□□□ -0.76
TRAF4-210ENST00000475329 CRIP1P50238 77 aa10.28□□□□□ -0.76
TRAF4-210ENST00000475329 DEFB1P60022 68 aa10.28□□□□□ -0.76
TRAF4-210ENST00000475329 OR2D3Q8NGH3 330 aa10.28□□□□□ -0.76
TRAF4-210ENST00000475329 TSKUQ8WUA8 353 aa10.28□□□□□ -0.76
TRAF4-210ENST00000475329 CITED1Q99966 193 aa10.28□□□□□ -0.76
TRAF4-210ENST00000475329 TRBV7-9A0A0J9YWB2 115 aa10.27□□□□□ -0.77
TRAF4-210ENST00000475329 SAP30O75446 220 aa10.27□□□□□ -0.77
TRAF4-210ENST00000475329 RPS10P46783 165 aaKnown RBP10.27□□□□□ -0.77
TRAF4-210ENST00000475329 TCL1AP56279 114 aa10.27□□□□□ -0.77
TRAF4-210ENST00000475329 RPL19P84098 196 aaKnown RBP10.27□□□□□ -0.77
TRAF4-210ENST00000475329 EBLN2Q6P2I7 272 aa10.27□□□□□ -0.77
TRAF4-210ENST00000475329 A0A0J9YX75 114 aa10.26□□□□□ -0.77
TRAF4-210ENST00000475329 DUSP14O95147 198 aaKnown RBP10.26□□□□□ -0.77
TRAF4-210ENST00000475329 TYMSP04818 313 aa10.26□□□□□ -0.77
TRAF4-210ENST00000475329 ZNF80P51504 273 aaPredicted RBP10.26□□□□□ -0.77
TRAF4-210ENST00000475329 FOXI2Q6ZQN5 318 aa10.26□□□□□ -0.77
TRAF4-210ENST00000475329 LINC00482Q8N8I6 264 aa10.26□□□□□ -0.77
TRAF4-210ENST00000475329 OR2K2Q8NGT1 345 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms