RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ZFAND6Q6FIF0 208 aa8.81□□□□□ -1
VAPB-204ENST00000475243 MRAPQ8TCY5 172 aa8.81□□□□□ -1
VAPB-204ENST00000475243 A0A1B0GUS0 222 aa8.81□□□□□ -1
VAPB-204ENST00000475243 CLPSL2Q6UWE3 100 aa8.81□□□□□ -1
VAPB-204ENST00000475243 LURAP1LQ8IV03 231 aa8.81□□□□□ -1
VAPB-204ENST00000475243 GAGE2AQ6NT46 116 aa8.81□□□□□ -1
VAPB-204ENST00000475243 CYYR1Q96J86 154 aa8.81□□□□□ -1
VAPB-204ENST00000475243 LY6G5BQ8NDX9 201 aa8.81□□□□□ -1
VAPB-204ENST00000475243 DLX4Q92988 240 aaPredicted RBP8.81□□□□□ -1
VAPB-204ENST00000475243 TP53TG1Q9Y2A0 90 aa8.81□□□□□ -1
VAPB-204ENST00000475243 IGKV1-6A0A0C4DH72 117 aa8.81□□□□□ -1
VAPB-204ENST00000475243 TRPT1Q86TN4 253 aaKnown RBP8.81□□□□□ -1
VAPB-204ENST00000475243 RPL32P62910 135 aaKnown RBP8.81□□□□□ -1
VAPB-204ENST00000475243 TMEM14BQ9NUH8 114 aa8.81□□□□□ -1
VAPB-204ENST00000475243 A0A1B0GW64 132 aa8.8□□□□□ -1
VAPB-204ENST00000475243 C9JAW5 83 aa8.8□□□□□ -1
VAPB-204ENST00000475243 LINC01559Q495D7 138 aa8.8□□□□□ -1
VAPB-204ENST00000475243 TEX36Q5VZQ5 186 aa8.8□□□□□ -1
VAPB-204ENST00000475243 PAX9P55771 341 aa8.8□□□□□ -1
VAPB-204ENST00000475243 GAGE6Q13070 117 aa8.8□□□□□ -1
VAPB-204ENST00000475243 REG4Q9BYZ8 158 aa8.8□□□□□ -1
VAPB-204ENST00000475243 KIAA1549Q9HCM3 1950 aa8.8□□□□□ -1
VAPB-204ENST00000475243 CR1LQ2VPA4 569 aa8.8□□□□□ -1
VAPB-204ENST00000475243 C1orf194Q5T5A4 169 aa8.8□□□□□ -1
VAPB-204ENST00000475243 KLF12Q9Y4X4 402 aa8.8□□□□□ -1
VAPB-204ENST00000475243 TPSG1Q9NRR2 321 aa8.8□□□□□ -1
VAPB-204ENST00000475243 CEACAM8P31997 349 aaPredicted RBP8.79□□□□□ -1
VAPB-204ENST00000475243 GTSF1LQ9H1H1 148 aa8.79□□□□□ -1
VAPB-204ENST00000475243 PRR14LQ5THK1 2151 aa8.79□□□□□ -1
VAPB-204ENST00000475243 NDUFS8O00217 210 aa8.79□□□□□ -1
VAPB-204ENST00000475243 C8orf86Q6ZUL3 223 aa8.79□□□□□ -1
VAPB-204ENST00000475243 PMVKQ15126 192 aa8.79□□□□□ -1
VAPB-204ENST00000475243 TRBV25-1A0A075B6N4 114 aa8.79□□□□□ -1
VAPB-204ENST00000475243 IGHV2-70DA0A0C4DH43 119 aa8.79□□□□□ -1
VAPB-204ENST00000475243 NEGR1Q7Z3B1 354 aa8.79□□□□□ -1
VAPB-204ENST00000475243 CGB7P0DN87 165 aa8.79□□□□□ -1
VAPB-204ENST00000475243 Q6ZR03 302 aa8.79□□□□□ -1
VAPB-204ENST00000475243 ZNRF2Q8NHG8 242 aa8.79□□□□□ -1
VAPB-204ENST00000475243 SRSF8Q9BRL6 282 aaKnown RBP8.79□□□□□ -1
VAPB-204ENST00000475243 FAM208BQ5VWN6 2430 aa8.78□□□□□ -1
VAPB-204ENST00000475243 C17orf58Q2M2W7 97 aa8.78□□□□□ -1
VAPB-204ENST00000475243 PRSS57Q6UWY2 283 aa8.78□□□□□ -1
VAPB-204ENST00000475243 TMEM75Q8N9X5 138 aa8.78□□□□□ -1
VAPB-204ENST00000475243 IGFBPL1Q8WX77 278 aa8.78□□□□□ -1
VAPB-204ENST00000475243 NDUFA4L2Q9NRX3 87 aa8.78□□□□□ -1
VAPB-204ENST00000475243 NXPH4O95158 308 aa8.78□□□□□ -1
VAPB-204ENST00000475243 PDE6HQ13956 83 aa8.78□□□□□ -1
VAPB-204ENST00000475243 CHAC1Q9BUX1 264 aa8.78□□□□□ -1
VAPB-204ENST00000475243 SNHG12Q9BXW3 62 aa8.78□□□□□ -1
VAPB-204ENST00000475243 ZNF503-AS2A6NEH8 195 aa8.78□□□□□ -1
VAPB-204ENST00000475243 GATA3P23771 443 aa8.78□□□□□ -1
VAPB-204ENST00000475243 DIAPH2-AS1Q14236 149 aa8.78□□□□□ -1
VAPB-204ENST00000475243 FAM120AOSQ5T036 256 aa8.78□□□□□ -1
VAPB-204ENST00000475243 OBSL1O75147 1896 aa8.78□□□□□ -1
VAPB-204ENST00000475243 RNASE13Q5GAN3 156 aaKnown RBP8.78□□□□□ -1
VAPB-204ENST00000475243 WDR86Q86TI4 376 aa8.77□□□□□ -1
VAPB-204ENST00000475243 DNAJC30Q96LL9 226 aa8.77□□□□□ -1.01
VAPB-204ENST00000475243 IGF2BP2-AS1Q96M15 143 aa8.77□□□□□ -1.01
VAPB-204ENST00000475243 PCNX3Q9H6A9 2034 aa8.77□□□□□ -1.01
VAPB-204ENST00000475243 MMP23AO75900 390 aa8.77□□□□□ -1.01
VAPB-204ENST00000475243 MST1LQ2TV78 715 aa8.77□□□□□ -1.01
VAPB-204ENST00000475243 PYY3Q5JQD4 70 aa8.77□□□□□ -1.01
VAPB-204ENST00000475243 THAP8Q8NA92 274 aa8.77□□□□□ -1.01
VAPB-204ENST00000475243 FNDC10F2Z333 226 aa8.77□□□□□ -1.01
VAPB-204ENST00000475243 CITED2Q99967 270 aaPredicted RBP8.77□□□□□ -1.01
VAPB-204ENST00000475243 LY96Q9Y6Y9 160 aa8.77□□□□□ -1.01
VAPB-204ENST00000475243 I3L3M4 83 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 ANXA2RQ3ZCQ2 193 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 Q6ZS49 121 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 ZNF833PQ6ZTB9 187 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 TMEM126AQ9H061 195 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 TRAV25A0A0B4J276 109 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 PROK2Q9HC23 129 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 MRPL27Q9P0M9 148 aaKnown RBP8.76□□□□□ -1.01
VAPB-204ENST00000475243 NUP210Q8TEM1 1887 aaPredicted RBP8.76□□□□□ -1.01
VAPB-204ENST00000475243 PFN1P07737 140 aaKnown RBP8.76□□□□□ -1.01
VAPB-204ENST00000475243 ZNF664Q8N3J9 261 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 NKAPP1Q8N9T2 125 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 FHL1Q13642 323 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 FOXL2NBQ6ZUU3 175 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 TCF15Q12870 199 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 IGLV3-9A0A075B6K5 115 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 C9JQL5 133 aa8.76□□□□□ -1.01
VAPB-204ENST00000475243 ADCYAP1P18509 176 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 TANC1Q9C0D5 1861 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 ZNF524Q96C55 264 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 LYL1P12980 280 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 IGHV1OR15-1A0A075B7D0 117 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 CDKN1BP46527 198 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 MRPL51Q4U2R6 128 aaKnown RBP8.75□□□□□ -1.01
VAPB-204ENST00000475243 HLA-DRB4P13762 266 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 ADAMTSL5Q6ZMM2 481 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 HLA-DRB4X5D2U9 266 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 TMEM131Q92545 1883 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 IGKV1-39P01597 117 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 ANGP03950 147 aaKnown RBP8.75□□□□□ -1.01
VAPB-204ENST00000475243 IGKV1D-39P04432 117 aa8.75□□□□□ -1.01
VAPB-204ENST00000475243 APOC4P55056 127 aa8.74□□□□□ -1.01
VAPB-204ENST00000475243 TRBV19A0A075B6N1 114 aa8.74□□□□□ -1.01
VAPB-204ENST00000475243 LY6G6EA0A0G2JKS1 128 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms