RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 FAM19A4Q96LR4 140 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 OTORQ9NRC9 128 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 XCL2Q9UBD3 114 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 HERC1Q15751 4861 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 TRAV8-1A0A0A6YYK1 113 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 A0A1B0GV50 99 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 A0A1W2PRE2 83 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 DIRC3C9JPN6 131 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 UBE2CO00762 179 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 CA1P00915 261 aaPredicted RBP5.06□□□□□ -1.6
LIMD1-204ENST00000474665 IGLV2-11P01706 119 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 H2AFB1P0C5Y9 115 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 RAB5CP51148 216 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 APOC4P55056 127 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 UBE2G2P60604 165 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 SUMO1P63165 101 aaKnown RBP5.06□□□□□ -1.6
LIMD1-204ENST00000474665 SPINK13Q1W4C9 94 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 PRR9Q5T870 116 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 Q6ZQT7 251 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 C9orf47Q6ZRZ4 202 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 C1orf158Q8N1D5 194 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 ZFAND2AQ8N6M9 145 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 TVP23CQ96ET8 276 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 AAMDCQ9H7C9 122 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 TMEM167BQ9NRX6 74 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 PRELID1Q9Y255 219 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 X6R8D5 127 aa5.06□□□□□ -1.6
LIMD1-204ENST00000474665 MUC4Q99102 2169 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 TRAV12-2A0A075B6T6 113 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 SPRY2O43597 315 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 DUSP14O95147 198 aaKnown RBP5.05□□□□□ -1.6
LIMD1-204ENST00000474665 PRM2P04554 102 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 ATP5G3P48201 142 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 EIF5AL1Q6IS14 154 aaKnown RBP5.05□□□□□ -1.6
LIMD1-204ENST00000474665 MORN3Q6PF18 240 aaPredicted RBP5.05□□□□□ -1.6
LIMD1-204ENST00000474665 ZNF705AQ6ZN79 300 aaPredicted RBP5.05□□□□□ -1.6
LIMD1-204ENST00000474665 IQCF2Q8IXL9 164 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 ARL6IP6Q8N6S5 226 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 C5orf17Q8NAS9 161 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 LYPD6BQ8NI32 183 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 Q8TAT8 98 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 LINC00479Q96M42 142 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 SPATA25Q9BR10 227 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 ZNF492Q9P255 531 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 TP53TG1Q9Y2A0 90 aa5.05□□□□□ -1.6
LIMD1-204ENST00000474665 HECTD4Q9Y4D8 3996 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 RBAKDNA6NC62 111 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 ZNF705EA8MWA4 302 aaPredicted RBP5.04□□□□□ -1.6
LIMD1-204ENST00000474665 KLLNB2CW77 178 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 PAGE4O60829 102 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 TCRAP04437 139 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 SLC25A5P05141 298 aaKnown RBP5.04□□□□□ -1.6
LIMD1-204ENST00000474665 CRISP2P16562 243 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 PMS2P11Q13670 270 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 GFI1BQ5VTD9 330 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 TEX261Q6UWH6 196 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 GOLT1AQ6ZVE7 132 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 Q8NAQ8 132 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 ZNF680Q8NEM1 530 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 OR10J6PQ8NGY7 276 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 OR11H2Q8NH07 326 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 RXFP4Q8TDU9 374 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 PCNPQ8WW12 178 aaKnown RBP5.04□□□□□ -1.6
LIMD1-204ENST00000474665 SGK494Q96LW2 274 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 IGF2BP2-AS1Q96M15 143 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 LINC00477Q96M19 166 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 ODF3Q96PU9 254 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 EDA2RQ9HAV5 297 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 PPP1R14DQ9NXH3 145 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 EPDR1Q9UM22 224 aa5.04□□□□□ -1.6
LIMD1-204ENST00000474665 TRAV34A0A0B4J273 112 aa5.03□□□□□ -1.6
LIMD1-204ENST00000474665 ZNF324O75467 553 aaPredicted RBP5.03□□□□□ -1.6
LIMD1-204ENST00000474665 CDKN1BP46527 198 aa5.03□□□□□ -1.6
LIMD1-204ENST00000474665 ZNF138P52744 262 aa5.03□□□□□ -1.6
LIMD1-204ENST00000474665 IFITM2Q01629 132 aa5.03□□□□□ -1.6
LIMD1-204ENST00000474665 C2CD4CQ8TF44 421 aa5.03□□□□□ -1.6
LIMD1-204ENST00000474665 RPH3ALQ9UNE2 315 aa5.03□□□□□ -1.6
LIMD1-204ENST00000474665 KLF12Q9Y4X4 402 aa5.03□□□□□ -1.6
LIMD1-204ENST00000474665 ARL2-SNX15V9GYD0 113 aa5.03□□□□□ -1.6
LIMD1-204ENST00000474665 NACAE9PAV3 2078 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 TRBV7-9A0A0J9YWB2 115 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 SCO2A0A1W2PP80 73 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 PLAC8L1A1L4L8 177 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 J3KRW8 73 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 PEX7O00628 323 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 DEFB4AO15263 64 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 NMBP08949 121 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 AZU1P20160 251 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 CSN1S1P47710 185 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 NUTF2P61970 127 aaKnown RBP5.02□□□□□ -1.61
LIMD1-204ENST00000474665 BTN1A1Q13410 526 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 CST9LP1Q5W188 147 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 CYB561D1Q8N8Q1 229 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 CMTM2Q8TAZ6 248 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 C8orf49Q96NF6 230 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 NEU1Q99519 415 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 RARRES2Q99969 163 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 ATG101Q9BSB4 218 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 C1QTNF4Q9BXJ3 329 aa5.02□□□□□ -1.61
LIMD1-204ENST00000474665 NKX6-2Q9C056 277 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms