RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ZNF207O43670 478 aaKnown RBP16.63■□□□□ 0.25
CCM2-206ENST00000474617 GDF5OSQ5U4N7 250 aa16.63■□□□□ 0.25
CCM2-206ENST00000474617 CSPG4Q6UVK1 2322 aa16.63■□□□□ 0.25
CCM2-206ENST00000474617 ALKBH7Q9BT30 221 aaPredicted RBP16.63■□□□□ 0.25
CCM2-206ENST00000474617 NRN1Q9NPD7 142 aa16.63■□□□□ 0.25
CCM2-206ENST00000474617 CELSR2Q9HCU4 2923 aa16.62■□□□□ 0.25
CCM2-206ENST00000474617 ZNF705FA8MVS1 300 aaPredicted RBP16.62■□□□□ 0.25
CCM2-206ENST00000474617 UBE2E2Q96LR5 201 aa16.62■□□□□ 0.25
CCM2-206ENST00000474617 LINC00477Q96M19 166 aa16.62■□□□□ 0.25
CCM2-206ENST00000474617 SAMD10Q9BYL1 202 aa16.62■□□□□ 0.25
CCM2-206ENST00000474617 ZNF702PQ9H963 129 aa16.62■□□□□ 0.25
CCM2-206ENST00000474617 SMPXQ9UHP9 88 aa16.62■□□□□ 0.25
CCM2-206ENST00000474617 PCP4L1A6NKN8 68 aa16.61■□□□□ 0.25
CCM2-206ENST00000474617 HOXA3O43365 443 aaPredicted RBP16.61■□□□□ 0.25
CCM2-206ENST00000474617 ZNF493Q6ZR52 646 aa16.61■□□□□ 0.25
CCM2-206ENST00000474617 HLA-DMBP28068 263 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 CTRLP40313 264 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 KIAA1644Q3SXP7 199 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 LINC01559Q495D7 138 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 REC114Q7Z4M0 266 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 SIGLECL1Q8N7X8 197 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 C18orf32Q8TCD1 76 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 FOXC2Q99958 501 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 GSN-AS1Q9NRJ2 163 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 CENPEQ02224 2701 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 LGALS9O00182 355 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 SOCS3O14543 225 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 LGALS1P09382 135 aaKnown RBP16.6■□□□□ 0.25
CCM2-206ENST00000474617 GZMBP10144 247 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 LINC00310P59036 64 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 RHPN1-AS1Q9BWJ2 59 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 VPS13CQ709C8 3753 aa16.6■□□□□ 0.25
CCM2-206ENST00000474617 POLQO75417 2590 aa16.59■□□□□ 0.25
CCM2-206ENST00000474617 IGHV3OR16-13A0A075B7E8 117 aa16.59■□□□□ 0.25
CCM2-206ENST00000474617 LOC102724200A0A096LPH7 203 aaPredicted RBP16.59■□□□□ 0.25
CCM2-206ENST00000474617 IGHV3-49A0A0A0MS15 119 aa16.59■□□□□ 0.25
CCM2-206ENST00000474617 IGHV3-74A0A0B4J1X5 117 aa16.59■□□□□ 0.25
CCM2-206ENST00000474617 F2Z2F3 143 aa16.59■□□□□ 0.25
CCM2-206ENST00000474617 SMAD7O15105 426 aaKnown RBP16.59■□□□□ 0.25
CCM2-206ENST00000474617 SCGB2A2Q13296 93 aa16.59■□□□□ 0.25
CCM2-206ENST00000474617 RNF182Q8N6D2 247 aa16.59■□□□□ 0.25
CCM2-206ENST00000474617 OR10J6PQ8NGY7 276 aa16.59■□□□□ 0.25
CCM2-206ENST00000474617 AGPAT4-IT1Q9H0P7 198 aa16.59■□□□□ 0.25
CCM2-206ENST00000474617 PRAC2D3DTV9 90 aa16.58■□□□□ 0.24
CCM2-206ENST00000474617 GPX1P07203 203 aa16.58■□□□□ 0.24
CCM2-206ENST00000474617 RAB4AP20338 218 aa16.58■□□□□ 0.24
CCM2-206ENST00000474617 ID1P41134 155 aa16.58■□□□□ 0.24
CCM2-206ENST00000474617 IGFL4Q6B9Z1 124 aa16.58■□□□□ 0.24
CCM2-206ENST00000474617 IL17RELQ6ZVW7 336 aa16.58■□□□□ 0.24
CCM2-206ENST00000474617 Q8TAT8 98 aa16.58■□□□□ 0.24
CCM2-206ENST00000474617 CNFNQ9BYD5 112 aa16.58■□□□□ 0.24
CCM2-206ENST00000474617 ABCA12Q86UK0 2595 aa16.57■□□□□ 0.24
CCM2-206ENST00000474617 ZNF324O75467 553 aaPredicted RBP16.57■□□□□ 0.24
CCM2-206ENST00000474617 TMEM95Q3KNT9 176 aa16.57■□□□□ 0.24
CCM2-206ENST00000474617 ZNF738Q8NE65 137 aa16.57■□□□□ 0.24
CCM2-206ENST00000474617 CHCHD1Q96BP2 118 aaKnown RBP16.57■□□□□ 0.24
CCM2-206ENST00000474617 NUPR1O60356 82 aa16.56■□□□□ 0.24
CCM2-206ENST00000474617 ARMS2P0C7Q2 107 aa16.56■□□□□ 0.24
CCM2-206ENST00000474617 FER1L6-AS1Q8NA97 138 aa16.56■□□□□ 0.24
CCM2-206ENST00000474617 A0A1B0GUS0 222 aa16.55■□□□□ 0.24
CCM2-206ENST00000474617 IGLC6P0CF74 106 aa16.55■□□□□ 0.24
CCM2-206ENST00000474617 ERCC8Q13216 396 aa16.55■□□□□ 0.24
CCM2-206ENST00000474617 SSBP4Q9BWG4 385 aaPredicted RBP16.55■□□□□ 0.24
CCM2-206ENST00000474617 PMCHP20382 165 aa16.55■□□□□ 0.24
CCM2-206ENST00000474617 CHD6Q8TD26 2715 aa16.54■□□□□ 0.24
CCM2-206ENST00000474617 TSTD3H0UI37 97 aa16.54■□□□□ 0.24
CCM2-206ENST00000474617 ORM1P02763 201 aa16.54■□□□□ 0.24
CCM2-206ENST00000474617 AMTP48728 403 aa16.54■□□□□ 0.24
CCM2-206ENST00000474617 ZNF80P51504 273 aaPredicted RBP16.54■□□□□ 0.24
CCM2-206ENST00000474617 PKIAP61925 76 aa16.54■□□□□ 0.24
CCM2-206ENST00000474617 LYZL1Q6UWQ5 148 aa16.54■□□□□ 0.24
CCM2-206ENST00000474617 Q71RC1 249 aaPredicted RBP16.54■□□□□ 0.24
CCM2-206ENST00000474617 WFDC12Q8WWY7 111 aa16.54■□□□□ 0.24
CCM2-206ENST00000474617 APCP25054 2843 aa16.53■□□□□ 0.24
CCM2-206ENST00000474617 RPLP1P05386 114 aaKnown RBP16.53■□□□□ 0.24
CCM2-206ENST00000474617 TM4SF20Q53R12 229 aa16.53■□□□□ 0.24
CCM2-206ENST00000474617 LCNL1Q6ZST4 164 aa16.53■□□□□ 0.24
CCM2-206ENST00000474617 WFDC11Q8NEX6 87 aa16.53■□□□□ 0.24
CCM2-206ENST00000474617 MAP1AP78559 2803 aaPredicted RBP16.52■□□□□ 0.24
CCM2-206ENST00000474617 HSBP1O75506 76 aa16.52■□□□□ 0.24
CCM2-206ENST00000474617 RPL11P62913 178 aaKnown RBP16.52■□□□□ 0.24
CCM2-206ENST00000474617 SVEP1Q4LDE5 3571 aa16.51■□□□□ 0.23
CCM2-206ENST00000474617 CD5LO43866 347 aa16.51■□□□□ 0.23
CCM2-206ENST00000474617 RCHY1Q96PM5 261 aa16.51■□□□□ 0.23
CCM2-206ENST00000474617 NAGKQ9UJ70 344 aa16.51■□□□□ 0.23
CCM2-206ENST00000474617 TPPP3Q9BW30 176 aa16.5■□□□□ 0.23
CCM2-206ENST00000474617 M0QZ24 198 aa16.5■□□□□ 0.23
CCM2-206ENST00000474617 SCGB1D1O95968 90 aa16.5■□□□□ 0.23
CCM2-206ENST00000474617 Q6ZWC4 215 aa16.5■□□□□ 0.23
CCM2-206ENST00000474617 APRG1Q8IVJ8 170 aa16.5■□□□□ 0.23
CCM2-206ENST00000474617 C20orf173Q96LM9 149 aa16.5■□□□□ 0.23
CCM2-206ENST00000474617 TRAV21A0A0B4J279 112 aa16.49■□□□□ 0.23
CCM2-206ENST00000474617 TMEM213A2RRL7 107 aa16.49■□□□□ 0.23
CCM2-206ENST00000474617 OR5AL1P0C617 328 aa16.49■□□□□ 0.23
CCM2-206ENST00000474617 FAM104BQ5XKR9 115 aa16.49■□□□□ 0.23
CCM2-206ENST00000474617 OR8A1Q8NGG7 326 aa16.49■□□□□ 0.23
CCM2-206ENST00000474617 TMEM191AQ9H0A3 160 aa16.49■□□□□ 0.23
CCM2-206ENST00000474617 TMSB15BA0A087X1C1 80 aa16.48■□□□□ 0.23
CCM2-206ENST00000474617 PPBPP02775 128 aa16.48■□□□□ 0.23
CCM2-206ENST00000474617 FAM19A4Q96LR4 140 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms