RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 H3BTX0 84 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 GAGE7O76087 117 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 GAGE12FP0CL80 117 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 GAGE12GP0CL81 117 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 GAGE12IP0CL82 117 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 SMIM13P0DJ93 91 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 P0DMU3 169 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 FAM231AP0DMU4 169 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 FAM231CP0DMU5 169 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 SCGB1A1P11684 91 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 FHL1Q13642 323 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 Q71RC1 249 aaPredicted RBP3.63□□□□□ -1.83
CCNL1-215ENST00000474539 WDR86Q86TI4 376 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 AMN1Q8IY45 258 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 ATP6V0E2Q8NHE4 81 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 CACNA1CQ13936 2221 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 IGKV2-40A0A087WW87 121 aaPredicted RBP3.63□□□□□ -1.83
CCNL1-215ENST00000474539 TRBV6-1A0A0K0K1D8 114 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 C9JQL5 133 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 IGKV2D-40P01614 121 aaPredicted RBP3.63□□□□□ -1.83
CCNL1-215ENST00000474539 PYYP10082 97 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 GRNP28799 593 aaKnown RBP3.63□□□□□ -1.83
CCNL1-215ENST00000474539 H2BFSP57053 126 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 PAX2Q02962 417 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 C4orf48Q5BLP8 95 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 C11orf53Q8IXP5 236 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 TMEM263Q8WUH6 116 aaKnown RBP3.63□□□□□ -1.83
CCNL1-215ENST00000474539 MAP1BP46821 2468 aaKnown RBP3.63□□□□□ -1.83
CCNL1-215ENST00000474539 ACACAQ13085 2346 aa3.63□□□□□ -1.83
CCNL1-215ENST00000474539 BRI3O95415 125 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 IGKCP01834 107 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 IGKV1-16P04430 117 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 LINC00614P0C842 121 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 FANCMQ8IYD8 2048 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 ASCC3Q8N3C0 2202 aaKnown RBP3.62□□□□□ -1.83
CCNL1-215ENST00000474539 KIAA1549LQ6ZVL6 1849 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 RNF222A6NCQ9 220 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 ARMS2P0C7Q2 107 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 INAFM2P0DMQ5 153 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 NDPQ00604 133 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 IFITM3Q01628 133 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 ATXN8Q156A1 80 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 RPP25LQ8N5L8 163 aaKnown RBP3.62□□□□□ -1.83
CCNL1-215ENST00000474539 INAFM1C9JVW0 142 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 F8W735 103 aaPredicted RBP3.62□□□□□ -1.83
CCNL1-215ENST00000474539 SPINK13Q1W4C9 94 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 LGALS9BQ3B8N2 356 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 HSPB9Q9BQS6 159 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 KLK15Q9H2R5 256 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 SIGLEC8Q9NYZ4 499 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 PRO0255Q9UI72 69 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 DENND4AQ7Z401 1863 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 CACNA1EQ15878 2313 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 RPL23P62829 140 aaKnown RBP3.62□□□□□ -1.83
CCNL1-215ENST00000474539 COL5A1-AS1Q5SY13 56 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 IFI27L1Q96BM0 104 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 PRR25Q96S07 402 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 TIMM21Q9BVV7 248 aa3.62□□□□□ -1.83
CCNL1-215ENST00000474539 CEP290O15078 2479 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 A0A1B0GWB2 263 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 IGLC7A0M8Q6 106 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 GAGE12JA6NER3 117 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 K7EQD1 137 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 GAGE1Q13065 139 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 GAGE4Q13068 117 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 GAGE5Q13069 117 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 GAGE13Q4V321 117 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 GCSAMLQ5JQS6 135 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 Q8N8P6 123 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 MUC7Q8TAX7 377 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 C1orf159Q96HA4 380 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 ZNF747Q9BV97 191 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 LYZL1Q6UWQ5 148 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 CLUHP3Q96NS8 147 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 C2orf16Q68DN1 1984 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 TRAV4A0A0B4J268 109 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 UBE2BP63146 152 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 GNG5P63218 68 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 SLC7A5P1Q8MH63 180 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 WFDC11Q8NEX6 87 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 CEP350Q5VT06 3117 aa3.61□□□□□ -1.83
CCNL1-215ENST00000474539 ARID1BQ8NFD5 2236 aaPredicted RBP3.6□□□□□ -1.83
CCNL1-215ENST00000474539 RNF224P0DH78 156 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 C7orf33Q8WU49 177 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 TMEM170AQ8WVE7 144 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 ZNF503Q96F45 646 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 GPHA2Q96T91 129 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 GFI1Q99684 422 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 RNF126Q9BV68 326 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 TMEM126AQ9H061 195 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 PAM16Q9Y3D7 125 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 COL4A3Q01955 1670 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 NINQ8N4C6 2090 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 IGKV2D-24A0A075B6R9 120 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 IGHV4OR15-8A0A075B7B6 117 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 IGHV3OR16-8A0A075B7F1 116 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 A0A087WW49 117 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 K7EP13 123 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 HLA-DRB4P13762 266 aa3.6□□□□□ -1.83
CCNL1-215ENST00000474539 TMEM88Q6PEY1 159 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms