RNA–Protein interactions for RNA: ENST00000474160.1

SYF2-203, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2

Gene SYF2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-203ENST00000474160 A0A0D9SG52 128 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 KLLNB2CW77 178 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 GFI1BQ5VTD9 330 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 KCNRGQ8N5I3 272 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 SUN5Q8TC36 379 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 TMED6Q8WW62 240 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 RAB24Q969Q5 203 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 PYGO2Q9BRQ0 406 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 TMEM167BQ9NRX6 74 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 ZNF492Q9P255 531 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 YTHDF2Q9Y5A9 579 aaKnown RBP13.55□□□□□ -0.24
SYF2-203ENST00000474160 LENEPQ9Y5L5 61 aa13.55□□□□□ -0.24
SYF2-203ENST00000474160 SACSQ9NZJ4 4579 aa13.54□□□□□ -0.24
SYF2-203ENST00000474160 CXorf1O96002 111 aa13.54□□□□□ -0.24
SYF2-203ENST00000474160 EMP1P54849 157 aa13.54□□□□□ -0.24
SYF2-203ENST00000474160 FAM222AQ5U5X8 452 aa13.54□□□□□ -0.24
SYF2-203ENST00000474160 CCDC28AQ8IWP9 274 aa13.54□□□□□ -0.24
SYF2-203ENST00000474160 CMTM2Q8TAZ6 248 aa13.54□□□□□ -0.24
SYF2-203ENST00000474160 TMEM263Q8WUH6 116 aaKnown RBP13.54□□□□□ -0.24
SYF2-203ENST00000474160 ARPC5LQ9BPX5 153 aa13.54□□□□□ -0.24
SYF2-203ENST00000474160 SH3BGRL3Q9H299 93 aa13.54□□□□□ -0.24
SYF2-203ENST00000474160 PLECQ15149 4684 aaKnown RBP13.53□□□□□ -0.24
SYF2-203ENST00000474160 SERTM2A0A1B0GWG4 89 aa13.53□□□□□ -0.24
SYF2-203ENST00000474160 ZNF705GA8MUZ8 300 aaPredicted RBP13.53□□□□□ -0.24
SYF2-203ENST00000474160 DIRC3C9JPN6 131 aa13.53□□□□□ -0.24
SYF2-203ENST00000474160 ARL14EPLP0DKL9 152 aa13.53□□□□□ -0.24
SYF2-203ENST00000474160 ZNF138P52744 262 aa13.53□□□□□ -0.24
SYF2-203ENST00000474160 AKR1C8PQ5T2L2 129 aa13.53□□□□□ -0.24
SYF2-203ENST00000474160 FAM210BQ96KR6 192 aa13.53□□□□□ -0.24
SYF2-203ENST00000474160 LINC00467Q9BRT7 94 aa13.53□□□□□ -0.24
SYF2-203ENST00000474160 CYTL1Q9NRR1 136 aa13.53□□□□□ -0.24
SYF2-203ENST00000474160 IGKV2-40A0A087WW87 121 aaPredicted RBP13.52□□□□□ -0.25
SYF2-203ENST00000474160 DEFB131BA0A096LNP1 70 aa13.52□□□□□ -0.25
SYF2-203ENST00000474160 C7orf71A4D174 169 aa13.52□□□□□ -0.25
SYF2-203ENST00000474160 IGKV2D-40P01614 121 aaPredicted RBP13.52□□□□□ -0.25
SYF2-203ENST00000474160 EIF5AP63241 154 aaKnown RBP13.52□□□□□ -0.25
SYF2-203ENST00000474160 ERCC8Q13216 396 aa13.52□□□□□ -0.25
SYF2-203ENST00000474160 LINC00476Q8WZB0 136 aa13.52□□□□□ -0.25
SYF2-203ENST00000474160 CTXND1A0A1B0GTU2 59 aa13.51□□□□□ -0.25
SYF2-203ENST00000474160 PGPA6NDG6 321 aa13.51□□□□□ -0.25
SYF2-203ENST00000474160 SMLR1H3BR10 107 aa13.51□□□□□ -0.25
SYF2-203ENST00000474160 PRB4P10163 310 aaPredicted RBP13.51□□□□□ -0.25
SYF2-203ENST00000474160 GCHFRP30047 84 aa13.51□□□□□ -0.25
SYF2-203ENST00000474160 RNASE8Q8TDE3 154 aaKnown RBP13.51□□□□□ -0.25
SYF2-203ENST00000474160 ST6GAL2Q96JF0 529 aa13.51□□□□□ -0.25
SYF2-203ENST00000474160 VGLL1Q99990 258 aa13.51□□□□□ -0.25
SYF2-203ENST00000474160 TIMM8BQ9Y5J9 83 aaPredicted RBP13.51□□□□□ -0.25
SYF2-203ENST00000474160 GPX1P07203 203 aa13.5□□□□□ -0.25
SYF2-203ENST00000474160 DAD1P61803 113 aa13.5□□□□□ -0.25
SYF2-203ENST00000474160 KIR3DS1Q14943 382 aa13.5□□□□□ -0.25
SYF2-203ENST00000474160 Q6ZNX1 250 aa13.5□□□□□ -0.25
SYF2-203ENST00000474160 ALMS1Q8TCU4 4167 aa13.49□□□□□ -0.25
SYF2-203ENST00000474160 TRAV12-3A0A0B4J271 114 aa13.49□□□□□ -0.25
SYF2-203ENST00000474160 KANTRA0A1W2PQU2 76 aa13.49□□□□□ -0.25
SYF2-203ENST00000474160 PLAC8L1A1L4L8 177 aa13.49□□□□□ -0.25
SYF2-203ENST00000474160 IGLL5B9A064 214 aa13.49□□□□□ -0.25
SYF2-203ENST00000474160 HMGB3O15347 200 aaKnown RBP13.49□□□□□ -0.25
SYF2-203ENST00000474160 ZNF324O75467 553 aaPredicted RBP13.49□□□□□ -0.25
SYF2-203ENST00000474160 AZU1P20160 251 aa13.49□□□□□ -0.25
SYF2-203ENST00000474160 LGALS9CQ6DKI2 356 aa13.49□□□□□ -0.25
SYF2-203ENST00000474160 ZFAND2AQ8N6M9 145 aa13.49□□□□□ -0.25
SYF2-203ENST00000474160 C5orf17Q8NAS9 161 aa13.49□□□□□ -0.25
SYF2-203ENST00000474160 ZNF680Q8NEM1 530 aa13.49□□□□□ -0.25
SYF2-203ENST00000474160 OR11H4Q8NGC9 324 aa13.49□□□□□ -0.25
SYF2-203ENST00000474160 BCL2L11O43521 198 aa13.48□□□□□ -0.25
SYF2-203ENST00000474160 SEC11BP0C7V7 166 aa13.48□□□□□ -0.25
SYF2-203ENST00000474160 HTN1P15515 57 aa13.48□□□□□ -0.25
SYF2-203ENST00000474160 ANXA2RQ3ZCQ2 193 aa13.48□□□□□ -0.25
SYF2-203ENST00000474160 TCTE3Q8IZS6 198 aa13.48□□□□□ -0.25
SYF2-203ENST00000474160 HYLS1Q96M11 299 aa13.48□□□□□ -0.25
SYF2-203ENST00000474160 NKX6-2Q9C056 277 aaPredicted RBP13.48□□□□□ -0.25
SYF2-203ENST00000474160 DNAH1Q9P2D7 4330 aa13.48□□□□□ -0.25
SYF2-203ENST00000474160 RYR3Q15413 4870 aa13.47□□□□□ -0.25
SYF2-203ENST00000474160 A0A1W2PRE2 83 aa13.47□□□□□ -0.25
SYF2-203ENST00000474160 FBLL1A6NHQ2 334 aaKnown RBP13.47□□□□□ -0.25
SYF2-203ENST00000474160 UMAD1C9J7I0 102 aa13.47□□□□□ -0.25
SYF2-203ENST00000474160 J3KRW8 73 aa13.47□□□□□ -0.25
SYF2-203ENST00000474160 K7EQM0 130 aa13.47□□□□□ -0.25
SYF2-203ENST00000474160 EIF3GO75821 320 aaKnown RBP eCLIP13.47□□□□□ -0.25
SYF2-203ENST00000474160 APLNQ9ULZ1 77 aa13.47□□□□□ -0.25
SYF2-203ENST00000474160 IGHV4-4A0A075B6R2 117 aa13.46□□□□□ -0.25
SYF2-203ENST00000474160 CD300CQ08708 224 aa13.46□□□□□ -0.25
SYF2-203ENST00000474160 BTN1A1Q13410 526 aa13.46□□□□□ -0.25
SYF2-203ENST00000474160 ZNF767PQ75MW2 155 aa13.46□□□□□ -0.25
SYF2-203ENST00000474160 EIF4E3Q8N5X7 224 aaKnown RBP13.46□□□□□ -0.25
SYF2-203ENST00000474160 NDUFAF3Q9BU61 184 aa13.46□□□□□ -0.25
SYF2-203ENST00000474160 SNURFLB1AK76 121 aa13.45□□□□□ -0.26
SYF2-203ENST00000474160 LY6G6CO95867 125 aa13.45□□□□□ -0.26
SYF2-203ENST00000474160 PRM2P04554 102 aa13.45□□□□□ -0.26
SYF2-203ENST00000474160 RNASE4P34096 147 aaKnown RBP13.45□□□□□ -0.26
SYF2-203ENST00000474160 DAZ2Q13117 558 aaKnown RBP13.45□□□□□ -0.26
SYF2-203ENST00000474160 ZNF726P1Q15940 193 aa13.45□□□□□ -0.26
SYF2-203ENST00000474160 IBA57Q5T440 356 aaKnown RBP13.45□□□□□ -0.26
SYF2-203ENST00000474160 STOML3Q8TAV4 291 aa13.45□□□□□ -0.26
SYF2-203ENST00000474160 ZNF471Q9BX82 626 aaPredicted RBP13.45□□□□□ -0.26
SYF2-203ENST00000474160 CBY3A6NI87 242 aa13.44□□□□□ -0.26
SYF2-203ENST00000474160 PFDN1O60925 122 aa13.44□□□□□ -0.26
SYF2-203ENST00000474160 Q6AWC8 147 aa13.44□□□□□ -0.26
SYF2-203ENST00000474160 DPPA3Q6W0C5 159 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms