RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 VAX2Q9UIW0 290 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 ARL2-SNX15V9GYD0 113 aa5.62□□□□□ -1.51
CCDC93-207ENST00000474006 LOC102723971A0A1B0GUV8 181 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 F6UB75 175 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 TCRAP04437 139 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 TAGLN2P37802 199 aaKnown RBP5.61□□□□□ -1.51
CCDC93-207ENST00000474006 ERCC8Q13216 396 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 ZNF506Q5JVG8 444 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 KPRPQ5T749 579 aaPredicted RBP5.61□□□□□ -1.51
CCDC93-207ENST00000474006 GDF5OSQ5U4N7 250 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 EBLN2Q6P2I7 272 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 Q6ZSN1 163 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 ARL6IP6Q8N6S5 226 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 C5orf17Q8NAS9 161 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 LINC00479Q96M42 142 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 NEU1Q99519 415 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 VGLL1Q99990 258 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 TXNDC17Q9BRA2 123 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 AGPAT4-IT1Q9H0P7 198 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 RPH3ALQ9UNE2 315 aa5.61□□□□□ -1.51
CCDC93-207ENST00000474006 IGKV2-40A0A087WW87 121 aaPredicted RBP5.6□□□□□ -1.51
CCDC93-207ENST00000474006 A0A0J9YX75 114 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 LINC00862A6NCI5 91 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 C9JQL5 133 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 F6UZH7 168 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 H3BMM0 161 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 PDE6DO43924 150 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 IGKV2D-40P01614 121 aaPredicted RBP5.6□□□□□ -1.51
CCDC93-207ENST00000474006 PRB2P02812 416 aaPredicted RBP5.6□□□□□ -1.51
CCDC93-207ENST00000474006 MEF2BQ02080 365 aaPredicted RBP5.6□□□□□ -1.51
CCDC93-207ENST00000474006 PEA15Q15121 130 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 ACTL10Q5JWF8 245 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 FOXI2Q6ZQN5 318 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 GOLT1AQ6ZVE7 132 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 OR8A1Q8NGG7 326 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 OR10J6PQ8NGY7 276 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 HIST1H2BAQ96A08 127 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 LINC00477Q96M19 166 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 WFDC10AQ9H1F0 79 aa5.6□□□□□ -1.51
CCDC93-207ENST00000474006 SAV1Q9H4B6 383 aaPredicted RBP5.6□□□□□ -1.51
CCDC93-207ENST00000474006 DNAH3Q8TD57 4116 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 NOTCH3Q9UM47 2321 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 TRAV34A0A0B4J273 112 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 RAB19A4D1S5 217 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 RBAKDNA6NC62 111 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
CCDC93-207ENST00000474006 PEX7O00628 323 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 DUSP14O95147 198 aaKnown RBP5.59□□□□□ -1.51
CCDC93-207ENST00000474006 IGKV3-20P01619 116 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 CT45A10P0DMU9 189 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 CNN1P51911 297 aaKnown RBP5.59□□□□□ -1.51
CCDC93-207ENST00000474006 HIST1H1AQ02539 215 aaPredicted RBP5.59□□□□□ -1.51
CCDC93-207ENST00000474006 C9orf47Q6ZRZ4 202 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 STHQ8IWL8 128 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 CYB561D1Q8N8Q1 229 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 OR4B1Q8NGF8 309 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 SGK494Q96LW2 274 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 TCEAL7Q9BRU2 100 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 ATG101Q9BSB4 218 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 TUBA4BQ9H853 241 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 MED9Q9NWA0 146 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 KLF12Q9Y4X4 402 aa5.59□□□□□ -1.51
CCDC93-207ENST00000474006 TRAV8-1A0A0A6YYK1 113 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 SERTM2A0A1B0GWG4 89 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 K7EQM0 130 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 IGLV2-11P01706 119 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 SRP19P09132 144 aaKnown RBP5.58□□□□□ -1.52
CCDC93-207ENST00000474006 HLA-DRB4P13762 266 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 RPL35AP18077 110 aaKnown RBP5.58□□□□□ -1.52
CCDC93-207ENST00000474006 BTF3P20290 206 aaKnown RBP5.58□□□□□ -1.52
CCDC93-207ENST00000474006 ZNF138P52744 262 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 TMEM183BQ1AE95 376 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 C2CD4CQ8TF44 421 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 ASCL2Q99929 193 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 SMDT1Q9H4I9 107 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 SRD5A3Q9H8P0 318 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 TREM1Q9NP99 234 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 AURKAIP1Q9NWT8 199 aaPredicted RBP5.58□□□□□ -1.52
CCDC93-207ENST00000474006 PSG8Q9UQ74 426 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 HLA-DRB4X5D2U9 266 aa5.58□□□□□ -1.52
CCDC93-207ENST00000474006 RBMY1BA6NDE4 496 aaKnown RBP5.57□□□□□ -1.52
CCDC93-207ENST00000474006 RBMY1EA6NEQ0 496 aaKnown RBP5.57□□□□□ -1.52
CCDC93-207ENST00000474006 TMEM250H0YL14 139 aa5.57□□□□□ -1.52
CCDC93-207ENST00000474006 NDUFS6O75380 124 aaKnown RBP5.57□□□□□ -1.52
CCDC93-207ENST00000474006 S100A9P06702 114 aaKnown RBP5.57□□□□□ -1.52
CCDC93-207ENST00000474006 RBMY1DP0C7P1 496 aaKnown RBP5.57□□□□□ -1.52
CCDC93-207ENST00000474006 IGHV4-30-4P0DP06 118 aa5.57□□□□□ -1.52
CCDC93-207ENST00000474006 AKR1C3P42330 323 aa5.57□□□□□ -1.52
CCDC93-207ENST00000474006 RPL35P42766 123 aaKnown RBP5.57□□□□□ -1.52
CCDC93-207ENST00000474006 CEBPGP53567 150 aa5.57□□□□□ -1.52
CCDC93-207ENST00000474006 FLI1Q01543 452 aaPredicted RBP5.57□□□□□ -1.52
CCDC93-207ENST00000474006 TMEM78Q5T7P6 136 aa5.57□□□□□ -1.52
CCDC93-207ENST00000474006 AMTNQ6UX39 209 aa5.57□□□□□ -1.52
CCDC93-207ENST00000474006 PRNTQ86SH4 94 aa5.57□□□□□ -1.52
CCDC93-207ENST00000474006 TRPT1Q86TN4 253 aaKnown RBP5.57□□□□□ -1.52
CCDC93-207ENST00000474006 COMMD7Q86VX2 200 aa5.57□□□□□ -1.52
CCDC93-207ENST00000474006 TMEM75Q8N9X5 138 aa5.57□□□□□ -1.52
CCDC93-207ENST00000474006 C11orf52Q96A22 123 aa5.57□□□□□ -1.52
CCDC93-207ENST00000474006 DERL1Q9BUN8 251 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms