RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 BOKQ9UMX3 212 aaPredicted RBP2.55□□□□□ -2
BRCA1-212ENST00000473961 CYSLTR1Q9Y271 337 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 HS3ST2Q9Y278 367 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 TIMM9Q9Y5J7 89 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 DOCK6Q96HP0 2047 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 TRAV8-3A0A0A6YYJ7 113 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 CXorf51AA0A1B0GTR3 108 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 CTXND1A0A1B0GTU2 59 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 A0A1B0GXF2 115 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 hADV38S2A0JD32 116 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 F8W1H4 67 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 M0QXV9 152 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 SDCBPO00560 298 aaPredicted RBP2.54□□□□□ -2
BRCA1-212ENST00000473961 PDCD6O75340 191 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 IGKV1-39P01597 117 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 IGLV7-43P04211 117 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 IGKV1D-39P04432 117 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 IFI6P09912 130 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 FABP2P12104 132 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 RPS12P25398 132 aaKnown RBP2.54□□□□□ -2
BRCA1-212ENST00000473961 PEBP1P30086 187 aaKnown RBP2.54□□□□□ -2
BRCA1-212ENST00000473961 SSR2P43308 183 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 SPINT3P49223 89 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 UBE2G1P62253 170 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 ZNF90Q03938 601 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 PLCXD2Q0VAA5 305 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 LRRC75BQ2VPJ9 315 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 TMEM97Q5BJF2 176 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 SLC48A1Q6P1K1 146 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 PRNTQ86SH4 94 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 TTC9CQ8N5M4 171 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 ZNF439Q8NDP4 499 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 OR51T1Q8NGJ9 327 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 OR10X1Q8NGY0 326 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 OR10AG1Q8NH19 301 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 OR4A5Q8NH83 315 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 ZNF721Q8TF20 911 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 TSKUQ8WUA8 353 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 LSM10Q969L4 123 aaKnown RBP2.54□□□□□ -2
BRCA1-212ENST00000473961 PECRQ9BY49 303 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 TMEM191AQ9H0A3 160 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 TAAR3PQ9P1P4 343 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 SS18L2Q9UHA2 77 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 ZNF391Q9UJN7 358 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 HSPB8Q9UJY1 196 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 MCTS1Q9ULC4 181 aaKnown RBP2.54□□□□□ -2
BRCA1-212ENST00000473961 LY96Q9Y6Y9 160 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 R4GMQ9 66 aa2.54□□□□□ -2
BRCA1-212ENST00000473961 MDC1Q14676 2089 aaKnown RBP2.54□□□□□ -2
BRCA1-212ENST00000473961 THSD7AQ9UPZ6 1657 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 CABIN1Q9Y6J0 2220 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 ANAPC1Q9H1A4 1944 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 IGKV1-6A0A0C4DH72 117 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 LOC107986453A0A1B0GWG9 222 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 A0A1W2PPM0 123 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 ZNF878C9JN71 531 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 H3BP45 60 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 LGALS9O00182 355 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 SSSCA1O60232 199 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 BRI3O95415 125 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 HIST1H1EP10412 219 aaKnown RBP2.53□□□□□ -2
BRCA1-212ENST00000473961 SLC25A6P12236 298 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 HIST1H1TP22492 207 aaPredicted RBP2.53□□□□□ -2
BRCA1-212ENST00000473961 CBLN1P23435 193 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 TCL1AP56279 114 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 LINC00315P59091 139 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 KRTAP10-1P60331 282 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 RPS24P62847 133 aaKnown RBP2.53□□□□□ -2
BRCA1-212ENST00000473961 ZNF141Q15928 474 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 TIMM23BQ5SRD1 257 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 ZFAND6Q6FIF0 208 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 RASL11AQ6T310 242 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 GLIPR1L1Q6UWM5 242 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 TCF23Q7RTU1 214 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 BPIFA4PQ86YQ2 179 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 BOD1L2Q8IYS8 172 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 SLC25A45Q8N413 288 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 OR2M3Q8NG83 312 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 KLF14Q8TD94 323 aaPredicted RBP2.53□□□□□ -2
BRCA1-212ENST00000473961 ARHGAP5-AS1Q96IT6 56 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 TMEM70Q9BUB7 260 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 OR2D2Q9H210 308 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 WDR54Q9H977 334 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 SND1-IT1Q9HBX3 110 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 HES4Q9HCC6 221 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 KCNIP2Q9NS61 270 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 NAT8BQ9UHF3 227 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 UFC1Q9Y3C8 167 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 SPCS1Q9Y6A9 102 aa2.53□□□□□ -2
BRCA1-212ENST00000473961 VWA8A3KMH1 1905 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 C3orf85A0A1B0GTC6 90 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 SPAARA0A1B0GVQ0 90 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 LRCOL1A6NCL2 159 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 IZUMO1RA6ND01 250 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 OR4C46A6NHA9 309 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 C2orf70A6NJV1 201 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 F5H5K5 113 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 H3BSH0 61 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 H3BUT2 72 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms