RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 C11orf94C9JXX5 98 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 FNDC10F2Z333 226 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 H3BQ15 152 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 BUB1B-PAK6H3BSN5 160 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 H3BTX0 84 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CLDN34H7C241 214 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 H7C2Y5 167 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 I3L2K1 104 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 K7EIM0 57 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 K7EN84 100 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 M0R1W7 72 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SLC17A3O00476 420 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 FCN1O00602 326 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 MRPS12O15235 138 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 NBR2O15453 112 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 NDUFA2O43678 99 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF861PO60384 105 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 MPDU1O75352 247 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SNAPINO95295 136 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 MT-CO2P00403 227 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 HRASP01112 189 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 IFNA10P01566 189 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 IFNA5P01569 189 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 HBE1P02100 147 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RBP4P02753 201 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 IFNA4P05014 189 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CRYBA1P05813 215 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CRYGCP07315 174 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SNRPCP09234 159 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 OR5G3P0C626 314 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 IGLC1P0CG04 106 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PPIAL4GP0DN37 164 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PYYP10082 97 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PRB4P10163 310 aaPredicted RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CTRB1P17538 263 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 HNF1AP20823 631 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 USF1P22415 310 aaPredicted RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PRTN3P24158 256 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 IL3RAP26951 378 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CD1BP29016 333 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 GCHFRP30047 84 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 OR10J1P30954 320 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SAA4P35542 130 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RPL27AP46776 148 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RPL29P47914 159 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CNN1P51911 297 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RND2P52198 227 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CEBPGP53567 150 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 UBE2G2P60604 165 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 B2MP61769 119 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 ARF6P62330 175 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RAB11AP62491 216 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RPL23P62829 140 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RPL8P62917 257 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 GNG5P63218 68 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 LCN2P80188 198 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SERF2P84101 59 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 FLI1Q01543 452 aaPredicted RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 MEF2BQ02080 365 aaPredicted RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 GAMTQ14353 236 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PSG5Q15238 335 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 ELOBQ15370 118 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RHEBQ15382 184 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 MMDQ15546 238 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 TNXAQ16473 311 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PRSS8Q16651 343 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 ATP6V1FQ16864 119 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 C5orf64Q2M2E5 130 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM249Q2WGJ8 235 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 AKIRIN2Q53H80 203 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SMUG1Q53HV7 270 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 KHDC3LQ587J8 217 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CENPWQ5EE01 88 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 KLF17Q5JT82 389 aaPredicted RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 FAM120AOSQ5T036 256 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CTRB2Q6GPI1 263 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 EIF5AL1Q6IS14 154 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PATE2Q6UY27 113 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CYP2G1PQ6ZSU1 146 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 TCF24Q7RTU0 167 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM144Q7Z5S9 345 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 IQCF2Q8IXL9 164 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 CEND1Q8N111 149 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 ZFP82Q8N141 532 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SVBPQ8N300 66 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 COMMD1Q8N668 190 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 Q8N9W7 124 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 OR4F17Q8NGA8 305 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 OR11H6Q8NGC7 330 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 OR10P1Q8NGE3 313 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 OR10G4Q8NGN3 311 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 OR10G9Q8NGN4 311 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 OR4C13Q8NGP0 309 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 OR5B3Q8NH48 314 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 OR4A5Q8NH83 315 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SCGB1C1Q8TD33 95 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 VN1R17PQ8TDU5 208 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 C10orf105Q8TEF2 133 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 Q8WTZ3 238 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 SFT2D1Q8WV19 159 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms