RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 TAS2R60P59551 318 aa13.49□□□□□ -0.25
PTCD3-210ENST00000473829 SERF2P84101 59 aa13.49□□□□□ -0.25
PTCD3-210ENST00000473829 SSX7Q7RTT5 188 aa13.49□□□□□ -0.25
PTCD3-210ENST00000473829 LYPD1Q8N2G4 141 aa13.49□□□□□ -0.25
PTCD3-210ENST00000473829 OR11H4Q8NGC9 324 aa13.49□□□□□ -0.25
PTCD3-210ENST00000473829 CYTL1Q9NRR1 136 aa13.49□□□□□ -0.25
PTCD3-210ENST00000473829 DEFB131BA0A096LNP1 70 aa13.48□□□□□ -0.25
PTCD3-210ENST00000473829 TRAV12-3A0A0B4J271 114 aa13.48□□□□□ -0.25
PTCD3-210ENST00000473829 IGLL5B9A064 214 aa13.48□□□□□ -0.25
PTCD3-210ENST00000473829 STAG3L2P0CL84 134 aa13.48□□□□□ -0.25
PTCD3-210ENST00000473829 STAG3L3P0CL85 134 aa13.48□□□□□ -0.25
PTCD3-210ENST00000473829 HTN1P15515 57 aa13.48□□□□□ -0.25
PTCD3-210ENST00000473829 RAB24Q969Q5 203 aa13.48□□□□□ -0.25
PTCD3-210ENST00000473829 LINC00477Q96M19 166 aa13.48□□□□□ -0.25
PTCD3-210ENST00000473829 C20orf144Q9BQM9 153 aa13.48□□□□□ -0.25
PTCD3-210ENST00000473829 NIPSNAP3BQ9BS92 247 aa13.48□□□□□ -0.25
PTCD3-210ENST00000473829 TEX48A0A1B0GUV7 120 aa13.47□□□□□ -0.25
PTCD3-210ENST00000473829 KLLNB2CW77 178 aa13.47□□□□□ -0.25
PTCD3-210ENST00000473829 H7BYZ3 331 aa13.47□□□□□ -0.25
PTCD3-210ENST00000473829 BTN1A1Q13410 526 aa13.47□□□□□ -0.25
PTCD3-210ENST00000473829 PRR9Q5T870 116 aa13.47□□□□□ -0.25
PTCD3-210ENST00000473829 Q8TAT8 98 aa13.47□□□□□ -0.25
PTCD3-210ENST00000473829 GNPNAT1Q96EK6 184 aaPredicted RBP13.47□□□□□ -0.25
PTCD3-210ENST00000473829 C7orf71A4D174 169 aa13.46□□□□□ -0.25
PTCD3-210ENST00000473829 LY6G6CO95867 125 aa13.46□□□□□ -0.25
PTCD3-210ENST00000473829 CRISP2P16562 243 aa13.46□□□□□ -0.25
PTCD3-210ENST00000473829 CD300CQ08708 224 aa13.46□□□□□ -0.25
PTCD3-210ENST00000473829 TMEM78Q5T7P6 136 aa13.46□□□□□ -0.25
PTCD3-210ENST00000473829 ZFAND2AQ8N6M9 145 aa13.46□□□□□ -0.25
PTCD3-210ENST00000473829 RNASE8Q8TDE3 154 aaKnown RBP13.46□□□□□ -0.25
PTCD3-210ENST00000473829 OTORQ9NRC9 128 aa13.46□□□□□ -0.25
PTCD3-210ENST00000473829 ZNF492Q9P255 531 aa13.46□□□□□ -0.25
PTCD3-210ENST00000473829 APLNQ9ULZ1 77 aa13.46□□□□□ -0.25
PTCD3-210ENST00000473829 IGHV4-4A0A075B6R2 117 aa13.45□□□□□ -0.26
PTCD3-210ENST00000473829 DIRC3C9JPN6 131 aa13.45□□□□□ -0.26
PTCD3-210ENST00000473829 MBP02144 154 aa13.45□□□□□ -0.26
PTCD3-210ENST00000473829 SLC25A5P05141 298 aaKnown RBP13.45□□□□□ -0.26
PTCD3-210ENST00000473829 ZNF726P1Q15940 193 aa13.45□□□□□ -0.26
PTCD3-210ENST00000473829 HYLS1Q96M11 299 aa13.45□□□□□ -0.26
PTCD3-210ENST00000473829 KMT2AQ03164 3969 aa13.44□□□□□ -0.26
PTCD3-210ENST00000473829 VPS13DQ5THJ4 4388 aa13.44□□□□□ -0.26
PTCD3-210ENST00000473829 RBAKDNA6NC62 111 aa13.44□□□□□ -0.26
PTCD3-210ENST00000473829 PGPA6NDG6 321 aa13.44□□□□□ -0.26
PTCD3-210ENST00000473829 TAAR5O14804 337 aa13.44□□□□□ -0.26
PTCD3-210ENST00000473829 GCHFRP30047 84 aa13.44□□□□□ -0.26
PTCD3-210ENST00000473829 CSN1S1P47710 185 aa13.44□□□□□ -0.26
PTCD3-210ENST00000473829 Q6ZQT7 251 aa13.44□□□□□ -0.26
PTCD3-210ENST00000473829 KCNRGQ8N5I3 272 aa13.44□□□□□ -0.26
PTCD3-210ENST00000473829 TMEM263Q8WUH6 116 aaKnown RBP13.44□□□□□ -0.26
PTCD3-210ENST00000473829 C16orf74Q96GX8 76 aa13.44□□□□□ -0.26
PTCD3-210ENST00000473829 LYRM9A8MSI8 78 aa13.43□□□□□ -0.26
PTCD3-210ENST00000473829 ZNF324O75467 553 aaPredicted RBP13.43□□□□□ -0.26
PTCD3-210ENST00000473829 RNASE4P34096 147 aaKnown RBP13.43□□□□□ -0.26
PTCD3-210ENST00000473829 ZNF138P52744 262 aa13.43□□□□□ -0.26
PTCD3-210ENST00000473829 DAD1P61803 113 aa13.43□□□□□ -0.26
PTCD3-210ENST00000473829 ZNF345Q14585 488 aa13.43□□□□□ -0.26
PTCD3-210ENST00000473829 SUN5Q8TC36 379 aa13.43□□□□□ -0.26
PTCD3-210ENST00000473829 ACTR3CQ9C0K3 210 aaPredicted RBP13.43□□□□□ -0.26
PTCD3-210ENST00000473829 RPH3ALQ9UNE2 315 aa13.43□□□□□ -0.26
PTCD3-210ENST00000473829 HMSDA8MTL9 139 aa13.42□□□□□ -0.26
PTCD3-210ENST00000473829 GNG5P63218 68 aa13.42□□□□□ -0.26
PTCD3-210ENST00000473829 RXFP4Q8TDU9 374 aa13.42□□□□□ -0.26
PTCD3-210ENST00000473829 ARPC5LQ9BPX5 153 aa13.42□□□□□ -0.26
PTCD3-210ENST00000473829 BOLA1Q9Y3E2 137 aa13.42□□□□□ -0.26
PTCD3-210ENST00000473829 GPX1P07203 203 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 NMBP08949 121 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 DEFB130BP0DP73 79 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 DEFB130AP0DP74 79 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 HTN3P15516 51 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 TCTAP57738 103 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 LGALS9CQ6DKI2 356 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 ZNF493Q6ZR52 646 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 GOLT1AQ6ZVE7 132 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 CMTM2Q8TAZ6 248 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 ST6GAL2Q96JF0 529 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 PYGO2Q9BRQ0 406 aa13.41□□□□□ -0.26
PTCD3-210ENST00000473829 CXorf1O96002 111 aa13.4□□□□□ -0.26
PTCD3-210ENST00000473829 FAM74A1Q5RGS3 127 aa13.4□□□□□ -0.26
PTCD3-210ENST00000473829 Q6ZNX1 250 aa13.4□□□□□ -0.26
PTCD3-210ENST00000473829 NOP10Q9NPE3 64 aaKnown RBP13.4□□□□□ -0.26
PTCD3-210ENST00000473829 TIMM8BQ9Y5J9 83 aaPredicted RBP13.4□□□□□ -0.26
PTCD3-210ENST00000473829 TRBV7-9A0A0J9YWB2 115 aa13.39□□□□□ -0.27
PTCD3-210ENST00000473829 CTXND1A0A1B0GTU2 59 aa13.39□□□□□ -0.27
PTCD3-210ENST00000473829 GGTLC3B5MD39 225 aa13.39□□□□□ -0.27
PTCD3-210ENST00000473829 AKR1C8PQ5T2L2 129 aa13.39□□□□□ -0.27
PTCD3-210ENST00000473829 CCDC28AQ8IWP9 274 aa13.39□□□□□ -0.27
PTCD3-210ENST00000473829 TRAV8-1A0A0A6YYK1 113 aa13.38□□□□□ -0.27
PTCD3-210ENST00000473829 IQCF2Q8IXL9 164 aa13.38□□□□□ -0.27
PTCD3-210ENST00000473829 LINC00467Q9BRT7 94 aa13.38□□□□□ -0.27
PTCD3-210ENST00000473829 TMPRSS5Q9H3S3 457 aa13.38□□□□□ -0.27
PTCD3-210ENST00000473829 TMEM167BQ9NRX6 74 aa13.38□□□□□ -0.27
PTCD3-210ENST00000473829 A0A0D9SG52 128 aa13.37□□□□□ -0.27
PTCD3-210ENST00000473829 BCL2L11O43521 198 aa13.37□□□□□ -0.27
PTCD3-210ENST00000473829 FGF8P55075 233 aaPredicted RBP13.37□□□□□ -0.27
PTCD3-210ENST00000473829 ARL6IP6Q8N6S5 226 aa13.37□□□□□ -0.27
PTCD3-210ENST00000473829 C11orf72Q8NBR9 251 aa13.37□□□□□ -0.27
PTCD3-210ENST00000473829 TMED6Q8WW62 240 aa13.37□□□□□ -0.27
PTCD3-210ENST00000473829 TVP23CQ96ET8 276 aa13.37□□□□□ -0.27
PTCD3-210ENST00000473829 TP53TG3Q9ULZ0 132 aa13.37□□□□□ -0.27
PTCD3-210ENST00000473829 DNAH6Q9C0G6 4158 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms