RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 LINC00477Q96M19 166 aa9.22□□□□□ -0.93
SHROOM3-204ENST00000473602 PKD1P98161 4303 aa9.21□□□□□ -0.93
SHROOM3-204ENST00000473602 SLC25A5P05141 298 aaKnown RBP9.21□□□□□ -0.94
SHROOM3-204ENST00000473602 CT45A10P0DMU9 189 aa9.21□□□□□ -0.94
SHROOM3-204ENST00000473602 DAD1P61803 113 aa9.21□□□□□ -0.94
SHROOM3-204ENST00000473602 UBE2L3P68036 154 aaKnown RBP9.21□□□□□ -0.94
SHROOM3-204ENST00000473602 GFI1BQ5VTD9 330 aa9.21□□□□□ -0.94
SHROOM3-204ENST00000473602 C9orf47Q6ZRZ4 202 aa9.21□□□□□ -0.94
SHROOM3-204ENST00000473602 LINC00336Q6ZUF6 198 aa9.21□□□□□ -0.94
SHROOM3-204ENST00000473602 TMEM263Q8WUH6 116 aaKnown RBP9.21□□□□□ -0.94
SHROOM3-204ENST00000473602 PSMG3Q9BT73 122 aaPredicted RBP9.21□□□□□ -0.94
SHROOM3-204ENST00000473602 NDUFAF3Q9BU61 184 aa9.21□□□□□ -0.94
SHROOM3-204ENST00000473602 A0A1B0GVY2 172 aa9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 A0A1W2PPV4 95 aa9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 PLAC8L1A1L4L8 177 aa9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 NMBP08949 121 aa9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 CSN1S1P47710 185 aa9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 FAM122CQ6P4D5 195 aa9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 PQLC2Q6ZP29 291 aa9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 INO80EQ8NBZ0 244 aaPredicted RBP9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 OR2G3Q8NGZ4 309 aa9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 PHYHIPLQ96FC7 376 aa9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 PYGO2Q9BRQ0 406 aa9.2□□□□□ -0.94
SHROOM3-204ENST00000473602 MUC4Q99102 2169 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 TRBV7-9A0A0J9YWB2 115 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 A0A1B0GVG6 124 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 RBAKDNA6NC62 111 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 KLLNB2CW77 178 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 CRISP2P16562 243 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 AZU1P20160 251 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 KIR3DS1Q14943 382 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 TMEM78Q5T7P6 136 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 CCDC28AQ8IWP9 274 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 OR2T35Q8NGX2 323 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 FAM19A4Q96LR4 140 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 AGPAT4-IT1Q9H0P7 198 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 Q9H3A6 140 aa9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 TIMM8BQ9Y5J9 83 aaPredicted RBP9.19□□□□□ -0.94
SHROOM3-204ENST00000473602 IGKV2-40A0A087WW87 121 aaPredicted RBP9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 C7orf71A4D174 169 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 IGKV2D-40P01614 121 aaPredicted RBP9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 PRM2P04554 102 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 HTN1P15515 57 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 RANP62826 216 aaKnown RBP9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 SERF2P84101 59 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 ERCC8Q13216 396 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 Q5BKY6 102 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 HSD17B11Q8NBQ5 300 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 OR10G4Q8NGN3 311 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 OR10G9Q8NGN4 311 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 OR10G7Q8NGN6 311 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 RXFP4Q8TDU9 374 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 TNFSF18Q9UNG2 199 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 HSPG2P98160 4391 aa9.18□□□□□ -0.94
SHROOM3-204ENST00000473602 FXYD6-FXYD2A0A087WZ82 144 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 BORCS7-ASMTA0A0B4J1R7 106 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 TRAV12-3A0A0B4J271 114 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 RNF222A6NCQ9 220 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 J3KRW8 73 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 MBP02144 154 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 P0DMU3 169 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 FAM231AP0DMU4 169 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 FAM231CP0DMU5 169 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 RAB2AP61019 212 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 FAM74A1Q5RGS3 127 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 ARL6IP6Q8N6S5 226 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 GNPNAT1Q96EK6 184 aaPredicted RBP9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 LINC00467Q9BRT7 94 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 KRTAP4-5Q9BYR2 181 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 ZNF492Q9P255 531 aa9.17□□□□□ -0.94
SHROOM3-204ENST00000473602 CBY3A6NI87 242 aa9.16□□□□□ -0.94
SHROOM3-204ENST00000473602 GPX1P07203 203 aa9.16□□□□□ -0.94
SHROOM3-204ENST00000473602 DEFB130BP0DP73 79 aa9.16□□□□□ -0.94
SHROOM3-204ENST00000473602 DEFB130AP0DP74 79 aa9.16□□□□□ -0.94
SHROOM3-204ENST00000473602 HTN3P15516 51 aa9.16□□□□□ -0.94
SHROOM3-204ENST00000473602 ATP6V0CP27449 155 aa9.16□□□□□ -0.94
SHROOM3-204ENST00000473602 CDC34P49427 236 aaPredicted RBP9.16□□□□□ -0.94
SHROOM3-204ENST00000473602 ZNF138P52744 262 aa9.16□□□□□ -0.94
SHROOM3-204ENST00000473602 VGLL1Q99990 258 aa9.16□□□□□ -0.94
SHROOM3-204ENST00000473602 OTORQ9NRC9 128 aa9.16□□□□□ -0.94
SHROOM3-204ENST00000473602 LENEPQ9Y5L5 61 aa9.16□□□□□ -0.94
SHROOM3-204ENST00000473602 PRSS29PA6NIE9 313 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 SNURFLB1AK76 121 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 ATP5G1P05496 136 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 STAG3L2P0CL84 134 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 STAG3L3P0CL85 134 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 ATP5G3P48201 142 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 NDUFA5Q16718 116 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 ZFAND2AQ8N6M9 145 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 C15orf53Q8NAA6 179 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 ZNF680Q8NEM1 530 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 CMTM2Q8TAZ6 248 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 TMED6Q8WW62 240 aa9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 NOP10Q9NPE3 64 aaKnown RBP9.15□□□□□ -0.94
SHROOM3-204ENST00000473602 DIRC3C9JPN6 131 aa9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 G3V3Q6 166 aa9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 TAAR5O14804 337 aa9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 ZNF324O75467 553 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms