RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, human

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD1-208	ENST00000472729	RNASE4	P34096	147 aa	Known RBP	13.78	□□□□□ -0.2
COMMD1-208	ENST00000472729	RAN	P62826	216 aa	Known RBP	13.78	□□□□□ -0.2
COMMD1-208	ENST00000472729	KIR3DS1	Q14943	382 aa		13.78	□□□□□ -0.2
COMMD1-208	ENST00000472729	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.78	□□□□□ -0.2
COMMD1-208	ENST00000472729	ATG101	Q9BSB4	218 aa		13.78	□□□□□ -0.2
COMMD1-208	ENST00000472729	C7orf71	A4D174	169 aa		13.77	□□□□□ -0.21
COMMD1-208	ENST00000472729	ZNF266	Q14584	549 aa		13.77	□□□□□ -0.21
COMMD1-208	ENST00000472729	FAM74A1	Q5RGS3	127 aa		13.77	□□□□□ -0.21
COMMD1-208	ENST00000472729	LYPD1	Q8N2G4	141 aa		13.77	□□□□□ -0.21
COMMD1-208	ENST00000472729	RNASE8	Q8TDE3	154 aa	Known RBP	13.77	□□□□□ -0.21
COMMD1-208	ENST00000472729	FXYD5	Q96DB9	178 aa		13.77	□□□□□ -0.21
COMMD1-208	ENST00000472729	AGPAT4-IT1	Q9H0P7	198 aa		13.77	□□□□□ -0.21
COMMD1-208	ENST00000472729	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.75	□□□□□ -0.21
COMMD1-208	ENST00000472729	PLAC8L1	A1L4L8	177 aa		13.75	□□□□□ -0.21
COMMD1-208	ENST00000472729	IGKV2D-40	P01614	121 aa	Predicted RBP	13.75	□□□□□ -0.21
COMMD1-208	ENST00000472729	C9orf47	Q6ZRZ4	202 aa		13.75	□□□□□ -0.21
COMMD1-208	ENST00000472729	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.75	□□□□□ -0.21
COMMD1-208	ENST00000472729	ZNF680	Q8NEM1	530 aa		13.75	□□□□□ -0.21
COMMD1-208	ENST00000472729	CMTM2	Q8TAZ6	248 aa		13.75	□□□□□ -0.21
COMMD1-208	ENST00000472729	RXFP4	Q8TDU9	374 aa		13.75	□□□□□ -0.21
COMMD1-208	ENST00000472729	RGS13	O14921	159 aa		13.74	□□□□□ -0.21
COMMD1-208	ENST00000472729	NUDT3	O95989	172 aa		13.74	□□□□□ -0.21
COMMD1-208	ENST00000472729	NMB	P08949	121 aa		13.74	□□□□□ -0.21
COMMD1-208	ENST00000472729	M6PR	P20645	277 aa		13.74	□□□□□ -0.21
COMMD1-208	ENST00000472729	OR5I1	Q13606	314 aa		13.74	□□□□□ -0.21
COMMD1-208	ENST00000472729	RNF212	Q495C1	297 aa		13.74	□□□□□ -0.21
COMMD1-208	ENST00000472729	ASB13	Q8WXK3	278 aa		13.74	□□□□□ -0.21
COMMD1-208	ENST00000472729	PHYHIPL	Q96FC7	376 aa		13.74	□□□□□ -0.21
COMMD1-208	ENST00000472729	HYLS1	Q96M11	299 aa		13.74	□□□□□ -0.21
COMMD1-208	ENST00000472729		Q9H3A6	140 aa		13.74	□□□□□ -0.21
COMMD1-208	ENST00000472729	ZNF138	P52744	262 aa		13.73	□□□□□ -0.21
COMMD1-208	ENST00000472729	OR10G4	Q8NGN3	311 aa		13.73	□□□□□ -0.21
COMMD1-208	ENST00000472729	OR10G9	Q8NGN4	311 aa		13.73	□□□□□ -0.21
COMMD1-208	ENST00000472729	OR10G7	Q8NGN6	311 aa		13.73	□□□□□ -0.21
COMMD1-208	ENST00000472729	GAGE12B	A1L429	117 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	KLLN	B2CW77	178 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729		M0R2N4	97 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	GAGE7	O76087	117 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	GAGE12F	P0CL80	117 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	GAGE12G	P0CL81	117 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	GAGE12I	P0CL82	117 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	BTN1A1	Q13410	526 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	PQLC2	Q6ZP29	291 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	EIF4E3	Q8N5X7	224 aa	Known RBP	13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	VGLL1	Q99990	258 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	ARPC5L	Q9BPX5	153 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	WFDC1	Q9HC57	220 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	ZNF492	Q9P255	531 aa		13.72	□□□□□ -0.21
COMMD1-208	ENST00000472729	TRGV2	A0A075B6R0	118 aa		13.71	□□□□□ -0.21
COMMD1-208	ENST00000472729	GIP	P09681	153 aa	Predicted RBP	13.71	□□□□□ -0.21
COMMD1-208	ENST00000472729	CRISP2	P16562	243 aa		13.71	□□□□□ -0.21
COMMD1-208	ENST00000472729	CD300C	Q08708	224 aa		13.71	□□□□□ -0.21
COMMD1-208	ENST00000472729	RGS21	Q2M5E4	152 aa		13.71	□□□□□ -0.21
COMMD1-208	ENST00000472729	HSD17B11	Q8NBQ5	300 aa		13.71	□□□□□ -0.21
COMMD1-208	ENST00000472729	RBAKDN	A6NC62	111 aa		13.7	□□□□□ -0.22
COMMD1-208	ENST00000472729	MB	P02144	154 aa		13.7	□□□□□ -0.22
COMMD1-208	ENST00000472729	CCL18	P55774	89 aa		13.7	□□□□□ -0.22
COMMD1-208	ENST00000472729	FAM3B	P58499	235 aa	Predicted RBP	13.7	□□□□□ -0.22
COMMD1-208	ENST00000472729	FAM19A4	Q96LR4	140 aa		13.7	□□□□□ -0.22
COMMD1-208	ENST00000472729	AQP10	Q96PS8	301 aa		13.7	□□□□□ -0.22
COMMD1-208	ENST00000472729	OTOR	Q9NRC9	128 aa		13.7	□□□□□ -0.22
COMMD1-208	ENST00000472729	RPH3AL	Q9UNE2	315 aa		13.7	□□□□□ -0.22
COMMD1-208	ENST00000472729	BIRC6	Q9NR09	4857 aa		13.69	□□□□□ -0.22
COMMD1-208	ENST00000472729	IGLV2-18	A0A075B6J9	118 aa		13.69	□□□□□ -0.22
COMMD1-208	ENST00000472729	TRBV7-9	A0A0J9YWB2	115 aa		13.69	□□□□□ -0.22
COMMD1-208	ENST00000472729	PGP	A6NDG6	321 aa		13.69	□□□□□ -0.22
COMMD1-208	ENST00000472729	RAB2A	P61019	212 aa		13.69	□□□□□ -0.22
COMMD1-208	ENST00000472729	DAZ2	Q13117	558 aa	Known RBP	13.69	□□□□□ -0.22
COMMD1-208	ENST00000472729	SOHLH1	Q5JUK2	328 aa		13.69	□□□□□ -0.22
COMMD1-208	ENST00000472729	LINC00336	Q6ZUF6	198 aa		13.69	□□□□□ -0.22
COMMD1-208	ENST00000472729	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.69	□□□□□ -0.22
COMMD1-208	ENST00000472729	GSN-AS1	Q9NRJ2	163 aa		13.69	□□□□□ -0.22
COMMD1-208	ENST00000472729	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.68	□□□□□ -0.22
COMMD1-208	ENST00000472729	ZNF324	O75467	553 aa	Predicted RBP	13.68	□□□□□ -0.22
COMMD1-208	ENST00000472729	CDC34	P49427	236 aa	Predicted RBP	13.68	□□□□□ -0.22
COMMD1-208	ENST00000472729	ANXA2R	Q3ZCQ2	193 aa		13.68	□□□□□ -0.22
COMMD1-208	ENST00000472729		Q8TAT8	98 aa		13.68	□□□□□ -0.22
COMMD1-208	ENST00000472729	ZNF503	Q96F45	646 aa		13.68	□□□□□ -0.22
COMMD1-208	ENST00000472729	LINC00467	Q9BRT7	94 aa		13.68	□□□□□ -0.22
COMMD1-208	ENST00000472729	IGHV1OR15-1	A0A075B7D0	117 aa		13.67	□□□□□ -0.22
COMMD1-208	ENST00000472729	FXYD6-FXYD2	A0A087WZ82	144 aa		13.67	□□□□□ -0.22
COMMD1-208	ENST00000472729	TRGV1	A0A0A0MS02	117 aa		13.67	□□□□□ -0.22
COMMD1-208	ENST00000472729	DIRC3	C9JPN6	131 aa		13.67	□□□□□ -0.22
COMMD1-208	ENST00000472729	HMGB3	O15347	200 aa	Known RBP	13.67	□□□□□ -0.22
COMMD1-208	ENST00000472729	TRAV26-1	A0A087WT03	109 aa		13.66	□□□□□ -0.22
COMMD1-208	ENST00000472729	EIF3G	O75821	320 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
COMMD1-208	ENST00000472729	SERF2	P84101	59 aa		13.66	□□□□□ -0.22
COMMD1-208	ENST00000472729	LGALS9B	Q3B8N2	356 aa		13.66	□□□□□ -0.22
COMMD1-208	ENST00000472729	ZFAND2A	Q8N6M9	145 aa		13.66	□□□□□ -0.22
COMMD1-208	ENST00000472729	PSMG3	Q9BT73	122 aa	Predicted RBP	13.66	□□□□□ -0.22
COMMD1-208	ENST00000472729	LENEP	Q9Y5L5	61 aa		13.66	□□□□□ -0.22
COMMD1-208	ENST00000472729		A0A0J9YY99	117 aa		13.65	□□□□□ -0.22
COMMD1-208	ENST00000472729	FAM159A	Q6UWV7	190 aa		13.65	□□□□□ -0.22
COMMD1-208	ENST00000472729		Q6ZTI0	123 aa		13.65	□□□□□ -0.22
COMMD1-208	ENST00000472729	LINC00612	Q8N6U2	182 aa		13.65	□□□□□ -0.22
COMMD1-208	ENST00000472729	OR2T35	Q8NGX2	323 aa		13.65	□□□□□ -0.22
COMMD1-208	ENST00000472729	OR2G3	Q8NGZ4	309 aa		13.65	□□□□□ -0.22
COMMD1-208	ENST00000472729	KMT2A	Q03164	3969 aa		13.65	□□□□□ -0.22
COMMD1-208	ENST00000472729		K7EQM0	130 aa		13.64	□□□□□ -0.23
COMMD1-208	ENST00000472729	ATP6V0C	P27449	155 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms