RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 DMBT1Q9UGM3 2413 aaPredicted RBP0.23□□□□□ -2.37
CLK1-209ENST00000472679 PDE4DIPQ5VU43 2346 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 hDV103S1A0JD37 113 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 FXYD4P59646 89 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 MNS1Q8NEH6 495 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 PPTC7Q8NI37 304 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 OR2J1Q9GZK6 312 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 PYCARDQ9ULZ3 195 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 ASPMQ8IZT6 3477 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 BICRAQ9NZM4 1560 aa0.23□□□□□ -2.37
CLK1-209ENST00000472679 EP400Q96L91 3159 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 ADGRL3Q9HAR2 1447 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 MUC3AQ02505 3323 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 SPTBP11277 2137 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 ODAMA1E959 279 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 ZNF727A8MUV8 499 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 CAPZBP47756 277 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 VBP1P61758 197 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 MSMO1Q15800 293 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 PAIP2Q9BPZ3 127 aaKnown RBP0.22□□□□□ -2.37
CLK1-209ENST00000472679 TCEAL2Q9H3H9 227 aaPredicted RBP0.22□□□□□ -2.37
CLK1-209ENST00000472679 HSPB8Q9UJY1 196 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 LAMA1P25391 3075 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 CRYBG3Q68DQ2 2970 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 DCHS1Q96JQ0 3298 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 NIPBLQ6KC79 2804 aaeCLIP0.22□□□□□ -2.37
CLK1-209ENST00000472679 BRCA2P51587 3418 aa0.22□□□□□ -2.37
CLK1-209ENST00000472679 N4BP2Q86UW6 1770 aaPredicted RBP0.22□□□□□ -2.37
CLK1-209ENST00000472679 TNCP24821 2201 aa0.21□□□□□ -2.38
CLK1-209ENST00000472679 TRPM1Q7Z4N2 1603 aa0.21□□□□□ -2.38
CLK1-209ENST00000472679 CFAP54Q96N23 3096 aa0.21□□□□□ -2.38
CLK1-209ENST00000472679 TMEM210A6NLX4 147 aa0.21□□□□□ -2.38
CLK1-209ENST00000472679 G3V2T6 193 aa0.21□□□□□ -2.38
CLK1-209ENST00000472679 RER1O15258 196 aa0.21□□□□□ -2.38
CLK1-209ENST00000472679 TRGC2P03986 189 aa0.21□□□□□ -2.38
CLK1-209ENST00000472679 Q6ZS92 163 aa0.21□□□□□ -2.38
CLK1-209ENST00000472679 GPX7Q96SL4 187 aaPredicted RBP0.21□□□□□ -2.38
CLK1-209ENST00000472679 LIMD2Q9BT23 127 aa0.21□□□□□ -2.38
CLK1-209ENST00000472679 KNTC1P50748 2209 aa0.21□□□□□ -2.38
CLK1-209ENST00000472679 CEP290O15078 2479 aa0.21□□□□□ -2.38
CLK1-209ENST00000472679 C5orf42Q9H799 3197 aa0.2□□□□□ -2.38
CLK1-209ENST00000472679 VPS13CQ709C8 3753 aa0.2□□□□□ -2.38
CLK1-209ENST00000472679 S100A6P06703 90 aa0.2□□□□□ -2.38
CLK1-209ENST00000472679 KDELR1P24390 212 aa0.2□□□□□ -2.38
CLK1-209ENST00000472679 OCIAD2Q56VL3 154 aa0.2□□□□□ -2.38
CLK1-209ENST00000472679 Q86TA4 180 aa0.2□□□□□ -2.38
CLK1-209ENST00000472679 IFT20Q8IY31 132 aa0.2□□□□□ -2.38
CLK1-209ENST00000472679 TPRP12270 2363 aaKnown RBP0.2□□□□□ -2.38
CLK1-209ENST00000472679 MAP1AP78559 2803 aaPredicted RBP0.2□□□□□ -2.38
CLK1-209ENST00000472679 SYNE1Q8NF91 8797 aaKnown RBP0.2□□□□□ -2.38
CLK1-209ENST00000472679 LRP5O75197 1615 aa0.2□□□□□ -2.38
CLK1-209ENST00000472679 USP34Q70CQ2 3546 aa0.2□□□□□ -2.38
CLK1-209ENST00000472679 WDR87Q6ZQQ6 2873 aa0.2□□□□□ -2.38
CLK1-209ENST00000472679 FRMPD1Q5SYB0 1578 aa0.19□□□□□ -2.38
CLK1-209ENST00000472679 FAM186AA6NE01 2351 aa0.19□□□□□ -2.38
CLK1-209ENST00000472679 IDO1P14902 403 aa0.19□□□□□ -2.38
CLK1-209ENST00000472679 SPTA1P02549 2419 aa0.19□□□□□ -2.38
CLK1-209ENST00000472679 MYO15AQ9UKN7 3530 aa0.19□□□□□ -2.38
CLK1-209ENST00000472679 DCHS2Q6V1P9 2916 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 CENPEQ02224 2701 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 CENPFP49454 3210 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 DMXL2Q8TDJ6 3036 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 H7C1C5 153 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 AIPO00170 330 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 LCN6P62502 163 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 LRP2P98164 4655 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 SNCBQ16143 134 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 DHRS4L2Q6PKH6 230 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 MAP1LC3BQ9GZQ8 125 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 MYCBP2O75592 4640 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 YTHDC2Q9H6S0 1430 aaKnown RBP0.18□□□□□ -2.38
CLK1-209ENST00000472679 STARD9Q9P2P6 4700 aa0.18□□□□□ -2.38
CLK1-209ENST00000472679 DNAH14Q0VDD8 3507 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 CHD9Q3L8U1 2897 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 LRP1BQ9NZR2 4599 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 CUBNO60494 3623 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 PTPRDP23468 1912 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 RIIAD1A6NNX1 92 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 ATG12O94817 140 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 IFNA4P05014 189 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 MIR22HGQ0VDD5 57 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 SCGB2B2Q4G0G5 96 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 UHRF1BP1Q6BDS2 1440 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 FOXI2Q6ZQN5 318 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 Q6ZQY7 126 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 DEFB123Q8N688 67 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 PXT1Q8NFP0 134 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 TSKUQ8WUA8 353 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 PLAC4Q8WY50 150 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 CEP19Q96LK0 163 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 SS18L2Q9UHA2 77 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 JPT1Q9UK76 154 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 RNF11Q9Y3C5 154 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 HECTD4Q9Y4D8 3996 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 DNAH7Q8WXX0 4024 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 SVEP1Q4LDE5 3571 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 WNK1Q9H4A3 2382 aa0.17□□□□□ -2.38
CLK1-209ENST00000472679 SRRM2Q9UQ35 2752 aaKnown RBP0.17□□□□□ -2.38
CLK1-209ENST00000472679 ALMS1Q8TCU4 4167 aa0.16□□□□□ -2.38
CLK1-209ENST00000472679 FREM2Q5SZK8 3169 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms