RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 KDM3BQ7LBC6 1761 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 PATJQ8NI35 1801 aa2.31□□□□□ -2.04
TTC3-214ENST00000472398 RALGAPBQ86X10 1494 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 IGKV1D-17A0A075B6S4 117 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 IGKV3D-20A0A0C4DH25 116 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 LINC01548A6NM66 108 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 SNRPGP15A8MWD9 76 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 B4DSR2 109 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 PEX7O00628 323 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 NANOS2P60321 138 aaKnown RBP2.3□□□□□ -2.04
TTC3-214ENST00000472398 SNRPFP62306 86 aaKnown RBP2.3□□□□□ -2.04
TTC3-214ENST00000472398 KRTAP27-1Q3LI81 207 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 CRIP3Q6Q6R5 217 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 ZFP2Q6ZN57 461 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 R3HDMLQ9H3Y0 253 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 NWD2Q9ULI1 1742 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 PIK3C2BO00750 1634 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 THSD7BQ9C0I4 1608 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 DOCK1Q14185 1865 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 IGHV1OR15-9A0A0B4J2B8 117 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 ZNF736B4DX44 427 aaPredicted RBP2.3□□□□□ -2.04
TTC3-214ENST00000472398 E7EQL1 145 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 HSPB1P04792 205 aaKnown RBP2.3□□□□□ -2.04
TTC3-214ENST00000472398 CD28P10747 220 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 DYNLT1P63172 113 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 Q0VFX4 171 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 FHL1Q13642 323 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 NOXRED1Q6NXP6 359 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 Q6YL49 198 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 MPLKIPQ8TAP9 179 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 B9D2Q9BPU9 175 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 SLC50A1Q9BRV3 221 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 MROH2AA6NES4 1674 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 PLXNB3Q9ULL4 1909 aa2.3□□□□□ -2.04
TTC3-214ENST00000472398 ARHGEF17Q96PE2 2063 aaPredicted RBP2.29□□□□□ -2.04
TTC3-214ENST00000472398 COL5A3P25940 1745 aaPredicted RBP2.29□□□□□ -2.04
TTC3-214ENST00000472398 ITSN1Q15811 1721 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 XRN1Q8IZH2 1706 aaKnown RBP2.29□□□□□ -2.04
TTC3-214ENST00000472398 IFT172Q9UG01 1749 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 ARHGAP21Q5T5U3 1957 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 GTF3C1Q12789 2109 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 MAST2Q6P0Q8 1798 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 IGHV7-81A0A0B4J1V7 117 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 C17orf51A8MQB3 221 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 IBA57-AS1B1ANH7 110 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 KRTAP4-16G5E9R7 235 aaPredicted RBP2.29□□□□□ -2.04
TTC3-214ENST00000472398 PIRTP0C851 137 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 PEBP1P30086 187 aaKnown RBP2.29□□□□□ -2.04
TTC3-214ENST00000472398 UBE2AP49459 152 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 ATP11AUNQ6ZP68 121 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 Q8N7P7 452 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 CSNK1G2-AS1Q8NCQ2 148 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 ZNF524Q96C55 264 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 LY96Q9Y6Y9 160 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 ZNF142P52746 1687 aaPredicted RBP2.29□□□□□ -2.04
TTC3-214ENST00000472398 EDC4Q6P2E9 1401 aaKnown RBP2.29□□□□□ -2.04
TTC3-214ENST00000472398 MYO5AQ9Y4I1 1855 aaKnown RBP2.29□□□□□ -2.04
TTC3-214ENST00000472398 RGPD4Q7Z3J3 1758 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 ASXL1Q8IXJ9 1541 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 PRB4P10163 310 aaPredicted RBP2.29□□□□□ -2.04
TTC3-214ENST00000472398 COX8AP10176 69 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 CCL5P13501 91 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 TSPEAR-AS2P59090 65 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 RHOHQ15669 191 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 FAM223AQ8IWN6 122 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 SPTSSAQ969W0 71 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 LINC01600Q96MT4 127 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 MGST2Q99735 147 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 FAM103A1Q9BTL3 118 aaKnown RBP2.29□□□□□ -2.04
TTC3-214ENST00000472398 BPESC1Q9GZL8 116 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 TAC3Q9UHF0 121 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 ARID1AO14497 2285 aa2.29□□□□□ -2.04
TTC3-214ENST00000472398 SUPT6HQ7KZ85 1726 aaKnown RBP2.29□□□□□ -2.04
TTC3-214ENST00000472398 SIPA1L3O60292 1781 aaPredicted RBP2.28□□□□□ -2.04
TTC3-214ENST00000472398 ABCC1P33527 1531 aa2.28□□□□□ -2.04
TTC3-214ENST00000472398 IGLV5-37A0A075B6J1 123 aa2.28□□□□□ -2.04
TTC3-214ENST00000472398 A8MU10 97 aa2.28□□□□□ -2.04
TTC3-214ENST00000472398 BGLAPP02818 100 aa2.28□□□□□ -2.04
TTC3-214ENST00000472398 PTHLHP12272 177 aa2.28□□□□□ -2.04
TTC3-214ENST00000472398 ZNF678Q5SXM1 525 aa2.28□□□□□ -2.04
TTC3-214ENST00000472398 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
TTC3-214ENST00000472398 TAS2R4Q9NYW5 299 aa2.28□□□□□ -2.04
TTC3-214ENST00000472398 TOP2BQ02880 1626 aa2.28□□□□□ -2.04
TTC3-214ENST00000472398 PIKFYVEQ9Y2I7 2098 aa2.28□□□□□ -2.04
TTC3-214ENST00000472398 CRB1P82279 1406 aa2.28□□□□□ -2.04
TTC3-214ENST00000472398 IGHV3-16A0A0C4DH30 117 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 H7BZZ5 65 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 BMPR1BO00238 502 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 PRSS1P07477 247 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 COX7A1P24310 79 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 CKS2P33552 79 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 DSCR9P59020 149 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 IGFL4Q6B9Z1 124 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 SMIM5Q71RC9 77 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 ZNF575Q86XF7 245 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 CCL4L1Q8NHW4 92 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 C8orf17Q9NRJ1 99 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 DHRS4-AS1Q9P1J3 65 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 PHLDA3Q9Y5J5 127 aa2.28□□□□□ -2.05
TTC3-214ENST00000472398 SCN4AP35499 1836 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms