RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 TMEM208Q9BTX3 173 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 MAP1LC3BQ9GZQ8 125 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 X6R8D5 127 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 TRBV7-9A0A0J9YWB2 115 aa10.95□□□□□ -0.66
SNX13-205ENST00000471744 SERTM2A0A1B0GWG4 89 aa10.95□□□□□ -0.66
SNX13-205ENST00000471744 A0A1W2PRE2 83 aa10.95□□□□□ -0.66
SNX13-205ENST00000471744 DIRC3C9JPN6 131 aa10.95□□□□□ -0.66
SNX13-205ENST00000471744 C3orf84H3BNL1 204 aa10.95□□□□□ -0.66
SNX13-205ENST00000471744 CRXO43186 299 aaPredicted RBP10.95□□□□□ -0.66
SNX13-205ENST00000471744 CT45A10P0DMU9 189 aa10.95□□□□□ -0.66
SNX13-205ENST00000471744 Q8NAQ8 132 aa10.95□□□□□ -0.66
SNX13-205ENST00000471744 C5orf17Q8NAS9 161 aa10.95□□□□□ -0.66
SNX13-205ENST00000471744 NKX6-2Q9C056 277 aaPredicted RBP10.95□□□□□ -0.66
SNX13-205ENST00000471744 AGPAT4-IT1Q9H0P7 198 aa10.95□□□□□ -0.66
SNX13-205ENST00000471744 IGHV3OR16-12A0A075B7B8 117 aa10.94□□□□□ -0.66
SNX13-205ENST00000471744 IGKV2-40A0A087WW87 121 aaPredicted RBP10.94□□□□□ -0.66
SNX13-205ENST00000471744 IGHV4-28A0A0C4DH34 117 aa10.94□□□□□ -0.66
SNX13-205ENST00000471744 TMEM189A5PLL7 270 aa10.94□□□□□ -0.66
SNX13-205ENST00000471744 IGKV2D-40P01614 121 aaPredicted RBP10.94□□□□□ -0.66
SNX13-205ENST00000471744 HBE1P02100 147 aa10.94□□□□□ -0.66
SNX13-205ENST00000471744 NMBP08949 121 aa10.94□□□□□ -0.66
SNX13-205ENST00000471744 PRB4P10163 310 aaPredicted RBP10.94□□□□□ -0.66
SNX13-205ENST00000471744 ERCC8Q13216 396 aa10.94□□□□□ -0.66
SNX13-205ENST00000471744 C4orf48Q5BLP8 95 aa10.94□□□□□ -0.66
SNX13-205ENST00000471744 C1orf158Q8N1D5 194 aa10.94□□□□□ -0.66
SNX13-205ENST00000471744 FAM213BQ8TBF2 198 aa10.94□□□□□ -0.66
SNX13-205ENST00000471744 MBD3L1Q8WWY6 194 aa10.94□□□□□ -0.66
SNX13-205ENST00000471744 TRAV12-2A0A075B6T6 113 aa10.93□□□□□ -0.66
SNX13-205ENST00000471744 K7EQM0 130 aa10.93□□□□□ -0.66
SNX13-205ENST00000471744 CRISP2P16562 243 aa10.93□□□□□ -0.66
SNX13-205ENST00000471744 ZNF138P52744 262 aa10.93□□□□□ -0.66
SNX13-205ENST00000471744 FGF8P55075 233 aaPredicted RBP10.93□□□□□ -0.66
SNX13-205ENST00000471744 VGLL1Q99990 258 aa10.93□□□□□ -0.66
SNX13-205ENST00000471744 ZNF492Q9P255 531 aa10.93□□□□□ -0.66
SNX13-205ENST00000471744 LENEPQ9Y5L5 61 aa10.93□□□□□ -0.66
SNX13-205ENST00000471744 ARL2-SNX15V9GYD0 113 aa10.93□□□□□ -0.66
SNX13-205ENST00000471744 LCE2BO14633 110 aa10.92□□□□□ -0.66
SNX13-205ENST00000471744 H2AFB1P0C5Y9 115 aa10.92□□□□□ -0.66
SNX13-205ENST00000471744 FHITP49789 147 aa10.92□□□□□ -0.66
SNX13-205ENST00000471744 SUMO1P63165 101 aaKnown RBP10.92□□□□□ -0.66
SNX13-205ENST00000471744 RRN3P1Q2M238 152 aa10.92□□□□□ -0.66
SNX13-205ENST00000471744 SFT2D1Q8WV19 159 aa10.92□□□□□ -0.66
SNX13-205ENST00000471744 FAM19A4Q96LR4 140 aa10.92□□□□□ -0.66
SNX13-205ENST00000471744 FBLL1A6NHQ2 334 aaKnown RBP10.91□□□□□ -0.66
SNX13-205ENST00000471744 KLLNB2CW77 178 aa10.91□□□□□ -0.66
SNX13-205ENST00000471744 TEX46H3BTG2 121 aa10.91□□□□□ -0.66
SNX13-205ENST00000471744 H7BYZ3 331 aa10.91□□□□□ -0.66
SNX13-205ENST00000471744 SULT1A2P50226 295 aa10.91□□□□□ -0.66
SNX13-205ENST00000471744 PPT1P50897 306 aa10.91□□□□□ -0.66
SNX13-205ENST00000471744 TAS2R60P59551 318 aa10.91□□□□□ -0.66
SNX13-205ENST00000471744 GFI1BQ5VTD9 330 aa10.91□□□□□ -0.66
SNX13-205ENST00000471744 GOLT1AQ6ZVE7 132 aa10.91□□□□□ -0.66
SNX13-205ENST00000471744 LINC01587Q99440 93 aa10.91□□□□□ -0.66
SNX13-205ENST00000471744 TMPRSS5Q9H3S3 457 aa10.91□□□□□ -0.66
SNX13-205ENST00000471744 RPH3ALQ9UNE2 315 aa10.91□□□□□ -0.66
SNX13-205ENST00000471744 TEX48A0A1B0GUV7 120 aa10.9□□□□□ -0.66
SNX13-205ENST00000471744 C7orf71A4D174 169 aa10.9□□□□□ -0.66
SNX13-205ENST00000471744 GGTLC3B5MD39 225 aa10.9□□□□□ -0.66
SNX13-205ENST00000471744 GPX1P07203 203 aa10.9□□□□□ -0.66
SNX13-205ENST00000471744 RBMY1A1P0DJD3 496 aaKnown RBP10.9□□□□□ -0.66
SNX13-205ENST00000471744 RBMY1CP0DJD4 496 aa10.9□□□□□ -0.66
SNX13-205ENST00000471744 RBMY1FQ15415 496 aaKnown RBP10.9□□□□□ -0.66
SNX13-205ENST00000471744 C11orf45Q8TAV5 145 aa10.9□□□□□ -0.66
SNX13-205ENST00000471744 TCEAL7Q9BRU2 100 aa10.9□□□□□ -0.66
SNX13-205ENST00000471744 NIPSNAP3BQ9BS92 247 aa10.9□□□□□ -0.66
SNX13-205ENST00000471744 EPDR1Q9UM22 224 aa10.9□□□□□ -0.66
SNX13-205ENST00000471744 TRAV1-1A0A0B4J248 108 aa10.89□□□□□ -0.67
SNX13-205ENST00000471744 LOC102723971A0A1B0GUV8 181 aa10.89□□□□□ -0.67
SNX13-205ENST00000471744 FAM74A7A6NL05 159 aa10.89□□□□□ -0.67
SNX13-205ENST00000471744 DEFB4AO15263 64 aa10.89□□□□□ -0.67
SNX13-205ENST00000471744 TCRAP04437 139 aa10.89□□□□□ -0.67
SNX13-205ENST00000471744 UBE2G2P60604 165 aa10.89□□□□□ -0.67
SNX13-205ENST00000471744 CYB561D1Q8N8Q1 229 aa10.89□□□□□ -0.67
SNX13-205ENST00000471744 ATG101Q9BSB4 218 aa10.89□□□□□ -0.67
SNX13-205ENST00000471744 F6UZH7 168 aa10.88□□□□□ -0.67
SNX13-205ENST00000471744 J3KRW8 73 aa10.88□□□□□ -0.67
SNX13-205ENST00000471744 J3QL48 77 aa10.88□□□□□ -0.67
SNX13-205ENST00000471744 IFNA7P01567 189 aa10.88□□□□□ -0.67
SNX13-205ENST00000471744 GNG5P63218 68 aa10.88□□□□□ -0.67
SNX13-205ENST00000471744 ZNF493Q6ZR52 646 aa10.88□□□□□ -0.67
SNX13-205ENST00000471744 ZFAND2AQ8N6M9 145 aa10.88□□□□□ -0.67
SNX13-205ENST00000471744 Q8TAT8 98 aa10.88□□□□□ -0.67
SNX13-205ENST00000471744 HIST1H2BAQ96A08 127 aa10.88□□□□□ -0.67
SNX13-205ENST00000471744 PYGO2Q9BRQ0 406 aa10.88□□□□□ -0.67
SNX13-205ENST00000471744 NDFIP1Q9BT67 221 aa10.88□□□□□ -0.67
SNX13-205ENST00000471744 YTHDF2Q9Y5A9 579 aaKnown RBP10.88□□□□□ -0.67
SNX13-205ENST00000471744 TRAV12-3A0A0B4J271 114 aa10.87□□□□□ -0.67
SNX13-205ENST00000471744 CXorf65A6NEN9 183 aa10.87□□□□□ -0.67
SNX13-205ENST00000471744 RNASE4P34096 147 aaKnown RBP10.87□□□□□ -0.67
SNX13-205ENST00000471744 NKX2-5P52952 324 aaPredicted RBP10.87□□□□□ -0.67
SNX13-205ENST00000471744 KIR3DS1Q14943 382 aa10.87□□□□□ -0.67
SNX13-205ENST00000471744 CCDC28AQ8IWP9 274 aa10.87□□□□□ -0.67
SNX13-205ENST00000471744 TMEM75Q8N9X5 138 aa10.87□□□□□ -0.67
SNX13-205ENST00000471744 C16orf74Q96GX8 76 aa10.87□□□□□ -0.67
SNX13-205ENST00000471744 ZNF705GA8MUZ8 300 aaPredicted RBP10.86□□□□□ -0.67
SNX13-205ENST00000471744 SPART-AS1P0CW21 52 aa10.86□□□□□ -0.67
SNX13-205ENST00000471744 CASC10Q5T4H9 136 aa10.86□□□□□ -0.67
SNX13-205ENST00000471744 CST9LP1Q5W188 147 aa10.86□□□□□ -0.67
SNX13-205ENST00000471744 TMEM263Q8WUH6 116 aaKnown RBP10.86□□□□□ -0.67
SNX13-205ENST00000471744 LINC00467Q9BRT7 94 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms