RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 FAM107BQ9H098 131 aa2.54□□□□□ -2
SMC5-202ENST00000471372 PLXNA4Q9HCM2 1894 aa2.54□□□□□ -2
SMC5-202ENST00000471372 LOC107986453A0A1B0GWG9 222 aa2.53□□□□□ -2
SMC5-202ENST00000471372 HMGN1P05114 100 aa2.53□□□□□ -2
SMC5-202ENST00000471372 ZCCHC23Q6ZST2 131 aa2.53□□□□□ -2
SMC5-202ENST00000471372 BANF2Q9H503 90 aa2.53□□□□□ -2
SMC5-202ENST00000471372 ZCCHC6Q5VYS8 1495 aaKnown RBP2.52□□□□□ -2.01
SMC5-202ENST00000471372 C3orf85A0A1B0GTC6 90 aa2.52□□□□□ -2.01
SMC5-202ENST00000471372 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
SMC5-202ENST00000471372 SPRNQ5BIV9 151 aa2.52□□□□□ -2.01
SMC5-202ENST00000471372 TEN1Q86WV5 123 aa2.52□□□□□ -2.01
SMC5-202ENST00000471372 INTS1Q8N201 2190 aaKnown RBP2.51□□□□□ -2.01
SMC5-202ENST00000471372 ZFC3H1O60293 1989 aaKnown RBP2.51□□□□□ -2.01
SMC5-202ENST00000471372 POLEQ07864 2286 aa2.51□□□□□ -2.01
SMC5-202ENST00000471372 LOC110117498A0A087WWA1 95 aa2.51□□□□□ -2.01
SMC5-202ENST00000471372 ZNF727A8MUV8 499 aa2.51□□□□□ -2.01
SMC5-202ENST00000471372 CCL25O15444 150 aa2.51□□□□□ -2.01
SMC5-202ENST00000471372 CCL4P13236 92 aa2.51□□□□□ -2.01
SMC5-202ENST00000471372 COX7CP15954 63 aa2.51□□□□□ -2.01
SMC5-202ENST00000471372 MPV17LQ2QL34 196 aa2.51□□□□□ -2.01
SMC5-202ENST00000471372 SMIM3Q9BZL3 60 aa2.51□□□□□ -2.01
SMC5-202ENST00000471372 ARFGEF3Q5TH69 2177 aa2.51□□□□□ -2.01
SMC5-202ENST00000471372 KIAA1549Q9HCM3 1950 aa2.5□□□□□ -2.01
SMC5-202ENST00000471372 A0A096LPI6 279 aa2.5□□□□□ -2.01
SMC5-202ENST00000471372 LOC107984156A0A0G2JMH3 177 aa2.5□□□□□ -2.01
SMC5-202ENST00000471372 INE1O15225 51 aa2.5□□□□□ -2.01
SMC5-202ENST00000471372 DNAL4O96015 105 aa2.5□□□□□ -2.01
SMC5-202ENST00000471372 MPC1LP0DKB6 136 aa2.5□□□□□ -2.01
SMC5-202ENST00000471372 ZNF25P17030 456 aaPredicted RBP2.5□□□□□ -2.01
SMC5-202ENST00000471372 DEFB115Q30KQ5 88 aa2.5□□□□□ -2.01
SMC5-202ENST00000471372 GLIPR1L1Q6UWM5 242 aa2.5□□□□□ -2.01
SMC5-202ENST00000471372 ARL17AQ8IVW1 177 aa2.5□□□□□ -2.01
SMC5-202ENST00000471372 OR4S1Q8NGB4 309 aa2.5□□□□□ -2.01
SMC5-202ENST00000471372 COPZ2Q9P299 210 aa2.5□□□□□ -2.01
SMC5-202ENST00000471372 CPDO75976 1380 aa2.49□□□□□ -2.01
SMC5-202ENST00000471372 TANC2Q9HCD6 1990 aa2.49□□□□□ -2.01
SMC5-202ENST00000471372 IGKV3-7A0A075B6H7 116 aa2.49□□□□□ -2.01
SMC5-202ENST00000471372 M0R2N4 97 aa2.49□□□□□ -2.01
SMC5-202ENST00000471372 NUPR1O60356 82 aa2.49□□□□□ -2.01
SMC5-202ENST00000471372 LSM3P62310 102 aaKnown RBP2.49□□□□□ -2.01
SMC5-202ENST00000471372 SNRPD3P62318 126 aaKnown RBP2.49□□□□□ -2.01
SMC5-202ENST00000471372 QRFPP83859 136 aa2.49□□□□□ -2.01
SMC5-202ENST00000471372 CASC2Q6XLA1 102 aa2.49□□□□□ -2.01
SMC5-202ENST00000471372 OR8J3Q8NGG0 315 aa2.49□□□□□ -2.01
SMC5-202ENST00000471372 OR10AG1Q8NH19 301 aa2.49□□□□□ -2.01
SMC5-202ENST00000471372 HEATR1Q9H583 2144 aaKnown RBP2.49□□□□□ -2.01
SMC5-202ENST00000471372 ZFP30Q9Y2G7 519 aa2.49□□□□□ -2.01
SMC5-202ENST00000471372 CECR2Q9BXF3 1484 aa2.49□□□□□ -2.01
SMC5-202ENST00000471372 SORL1Q92673 2214 aa2.48□□□□□ -2.01
SMC5-202ENST00000471372 COL1A1P02452 1464 aaPredicted RBP2.48□□□□□ -2.01
SMC5-202ENST00000471372 TNRC6BQ9UPQ9 1833 aaKnown RBP2.48□□□□□ -2.01
SMC5-202ENST00000471372 IGKV2-40A0A087WW87 121 aaPredicted RBP2.48□□□□□ -2.01
SMC5-202ENST00000471372 TRBV6-7A0A0A0MS04 114 aa2.48□□□□□ -2.01
SMC5-202ENST00000471372 H3BRM9 83 aa2.48□□□□□ -2.01
SMC5-202ENST00000471372 IGKV2D-40P01614 121 aaPredicted RBP2.48□□□□□ -2.01
SMC5-202ENST00000471372 TCEAL4Q96EI5 215 aa2.48□□□□□ -2.01
SMC5-202ENST00000471372 EXPH5Q8NEV8 1989 aa2.47□□□□□ -2.01
SMC5-202ENST00000471372 GEMIN2O14893 280 aaKnown RBP2.47□□□□□ -2.01
SMC5-202ENST00000471372 CD14P08571 375 aa2.47□□□□□ -2.01
SMC5-202ENST00000471372 COX4I1P13073 169 aa2.47□□□□□ -2.01
SMC5-202ENST00000471372 AKR1D1P51857 326 aa2.47□□□□□ -2.01
SMC5-202ENST00000471372 TMEM91Q6ZNR0 172 aa2.47□□□□□ -2.01
SMC5-202ENST00000471372 OBSCN-AS1Q96MR7 158 aa2.47□□□□□ -2.01
SMC5-202ENST00000471372 FREM3P0C091 2139 aa2.47□□□□□ -2.01
SMC5-202ENST00000471372 IGKV2-29A2NJV5 120 aaPredicted RBP2.46□□□□□ -2.02
SMC5-202ENST00000471372 SMIM24O75264 130 aa2.46□□□□□ -2.02
SMC5-202ENST00000471372 KLF7O75840 302 aaPredicted RBP2.46□□□□□ -2.02
SMC5-202ENST00000471372 PCBD1P61457 104 aa2.46□□□□□ -2.02
SMC5-202ENST00000471372 GLYATL3Q5SZD4 288 aa2.46□□□□□ -2.02
SMC5-202ENST00000471372 TSTD1Q8NFU3 115 aa2.46□□□□□ -2.02
SMC5-202ENST00000471372 OTOSQ8NHW6 89 aa2.46□□□□□ -2.02
SMC5-202ENST00000471372 SYNJ1O43426 1573 aa2.45□□□□□ -2.02
SMC5-202ENST00000471372 ADGRB2O60241 1585 aa2.45□□□□□ -2.02
SMC5-202ENST00000471372 HIST1H1BP16401 226 aaKnown RBP2.45□□□□□ -2.02
SMC5-202ENST00000471372 EVI2AP22794 236 aa2.45□□□□□ -2.02
SMC5-202ENST00000471372 CKS2P33552 79 aa2.45□□□□□ -2.02
SMC5-202ENST00000471372 ETV6P41212 452 aa2.45□□□□□ -2.02
SMC5-202ENST00000471372 CCDC58Q4VC31 144 aa2.45□□□□□ -2.02
SMC5-202ENST00000471372 DEFB119Q8N690 84 aa2.45□□□□□ -2.02
SMC5-202ENST00000471372 MAGOHBQ96A72 148 aaKnown RBP2.45□□□□□ -2.02
SMC5-202ENST00000471372 CIB3Q96Q77 187 aaPredicted RBP2.45□□□□□ -2.02
SMC5-202ENST00000471372 COMMD3Q9UBI1 195 aa2.45□□□□□ -2.02
SMC5-202ENST00000471372 DNAJC15Q9Y5T4 150 aa2.45□□□□□ -2.02
SMC5-202ENST00000471372 MPC1Q9Y5U8 109 aa2.45□□□□□ -2.02
SMC5-202ENST00000471372 FBN1P35555 2871 aaKnown RBP2.45□□□□□ -2.02
SMC5-202ENST00000471372 KDM5CP41229 1560 aa2.44□□□□□ -2.02
SMC5-202ENST00000471372 USP54Q70EL1 1684 aa2.44□□□□□ -2.02
SMC5-202ENST00000471372 SOGA1O94964 1423 aa2.44□□□□□ -2.02
SMC5-202ENST00000471372 M0R2Z0 102 aa2.44□□□□□ -2.02
SMC5-202ENST00000471372 PRB1P04280 392 aa2.44□□□□□ -2.02
SMC5-202ENST00000471372 HLA-DRB4P13762 266 aa2.44□□□□□ -2.02
SMC5-202ENST00000471372 NEDD8Q15843 81 aa2.44□□□□□ -2.02
SMC5-202ENST00000471372 TNFSF18Q9UNG2 199 aa2.44□□□□□ -2.02
SMC5-202ENST00000471372 HLA-DRB4X5D2U9 266 aa2.44□□□□□ -2.02
SMC5-202ENST00000471372 FGD6Q6ZV73 1430 aa2.43□□□□□ -2.02
SMC5-202ENST00000471372 EDF1O60869 148 aaKnown RBP2.43□□□□□ -2.02
SMC5-202ENST00000471372 CD3DP04234 171 aa2.43□□□□□ -2.02
SMC5-202ENST00000471372 IGLC6P0CF74 106 aa2.43□□□□□ -2.02
SMC5-202ENST00000471372 GDF5OSQ5U4N7 250 aa2.43□□□□□ -2.02
SMC5-202ENST00000471372 C10orf105Q8TEF2 133 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms