RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 RNF5Q99942 180 aa3.38□□□□□ -1.87
CKS1B-204ENST00000471245 SPANXB1Q9NS25 103 aaPredicted RBP3.38□□□□□ -1.87
CKS1B-204ENST00000471245 VPS13BQ7Z7G8 4022 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.37□□□□□ -1.87
CKS1B-204ENST00000471245 IGHV7-4-1A0A0J9YVY3 117 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 PNMA8CA0A1B0GUJ8 204 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 LOC100130705A0A1B0GUX0 176 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 C16orf90A8MZG2 172 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 E7EUB6 86 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 NDUFC2-KCTD14E9PQ53 114 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 ZNF324O75467 553 aaPredicted RBP3.37□□□□□ -1.87
CKS1B-204ENST00000471245 S1PR2O95136 353 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 RHOGP84095 191 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 LGALS9BQ3B8N2 356 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 C10orf55Q5SWW7 151 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 LAMTOR1Q6IAA8 161 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 LAIR2Q6ISS4 152 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 CLEC19AQ6UXS0 136 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 IDO2Q6ZQW0 420 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 PDPNQ86YL7 162 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 MRPL48Q96GC5 212 aaKnown RBP3.37□□□□□ -1.87
CKS1B-204ENST00000471245 USMG5Q96IX5 58 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 METTL26Q96S19 204 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 LPAR5Q9H1C0 372 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 C11orf68Q9H3H3 251 aaKnown RBP3.37□□□□□ -1.87
CKS1B-204ENST00000471245 DIABLOQ9NR28 239 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 BABAM2Q9NXR7 383 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 COA4Q9NYJ1 87 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 AK3Q9UIJ7 227 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 S4R3C0 116 aa3.37□□□□□ -1.87
CKS1B-204ENST00000471245 IGKV2D-24A0A075B6R9 120 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 TMEM14DPA8MWL7 114 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 M0R1X1 148 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 LGALS9O00182 355 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 DEFB4AO15263 64 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 CD74P04233 296 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 C8orf88P0DMB2 117 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 CBLN1P23435 193 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 OPRK1P41145 380 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 PSMB2P49721 201 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 HLA-DRB3P79483 266 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 YIF1BQ5BJH7 314 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 RNASE13Q5GAN3 156 aaKnown RBP3.36□□□□□ -1.87
CKS1B-204ENST00000471245 LINC00337Q8N6G1 96 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 BLNKQ8WV28 456 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 FRZBQ92765 325 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 C18orf15Q96N68 181 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 C8orf17Q9NRJ1 99 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 PRO0628Q9UI54 55 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 LRRC42Q9Y546 428 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 RFNGQ9Y644 331 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
CKS1B-204ENST00000471245 RBFOX3A6NFN3 312 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 IGLV2-8P01709 118 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 APOA2P02652 100 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 CELP19835 753 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 PRSS3P35030 304 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 LGALS7P47929 136 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 RPL30P62888 115 aaKnown RBP3.35□□□□□ -1.87
CKS1B-204ENST00000471245 ATP5G2Q06055 141 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 KLK9Q2XQG4 91 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 UNQ9165/PRO28630Q6UXU0 137 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 TTC9CQ8N5M4 171 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 ARHGAP5-AS1Q96IT6 56 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 WFDC1Q9HC57 220 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 ABRACLQ9P1F3 81 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 KLK9Q9UKQ9 250 aa3.35□□□□□ -1.87
CKS1B-204ENST00000471245 IGLV4-60A0A075B6I1 120 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 IGLV2-18A0A075B6J9 118 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 TRBV6-7A0A0A0MS04 114 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 FAM223BA6NKX1 122 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 A8MWP6 167 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 UPK2O00526 184 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 GGCTO75223 188 aaKnown RBP3.34□□□□□ -1.87
CKS1B-204ENST00000471245 CRYZL1O95825 349 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 RLN2P04090 185 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 LINC00869P0C866 280 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 SAA1P0DJI8 122 aaPredicted RBP3.34□□□□□ -1.87
CKS1B-204ENST00000471245 INAFM2P0DMQ5 153 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 P0DMU3 169 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 FAM231AP0DMU4 169 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 FAM231CP0DMU5 169 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 PVALBP20472 110 aaPredicted RBP3.34□□□□□ -1.87
CKS1B-204ENST00000471245 PSMB9P28065 219 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 COX19Q49B96 90 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 ACSM3Q53FZ2 586 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 LINC00483Q53H64 154 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 SAPCD1Q5SSQ6 148 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 FAM162BQ5T6X4 162 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 GPHB5Q86YW7 130 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 FAM223AQ8IWN6 122 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 TMEM256Q8N2U0 113 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.34□□□□□ -1.87
CKS1B-204ENST00000471245 OR11H2Q8NH07 326 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 CIRBP-AS1Q8TBR5 109 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 MAFIPQ8WZ33 124 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 PECRQ9BY49 303 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 OR2D2Q9H210 308 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 COMMD9Q9P000 198 aa3.34□□□□□ -1.87
CKS1B-204ENST00000471245 CKLFQ9UBR5 152 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 532.6 ms