RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 GDF5OSQ5U4N7 250 aa6.24□□□□□ -1.41
GTF3A-206ENST00000470606 Q6ZQT7 251 aa6.24□□□□□ -1.41
GTF3A-206ENST00000470606 ZNF575Q86XF7 245 aa6.24□□□□□ -1.41
GTF3A-206ENST00000470606 WFDC3Q8IUB2 231 aa6.24□□□□□ -1.41
GTF3A-206ENST00000470606 TMEM183AQ8IXX5 376 aa6.24□□□□□ -1.41
GTF3A-206ENST00000470606 TMEM61Q8N0U2 210 aa6.24□□□□□ -1.41
GTF3A-206ENST00000470606 AGPAT4-IT1Q9H0P7 198 aa6.24□□□□□ -1.41
GTF3A-206ENST00000470606 C19orf71A6NCJ1 209 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 K7EQG2 157 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 CSN1S1P47710 185 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 MEOX2P50222 304 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 FAM3BP58499 235 aaPredicted RBP6.23□□□□□ -1.41
GTF3A-206ENST00000470606 DEFB114Q30KQ6 69 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 KRTAP24-1Q3LI83 254 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 PRR27Q6MZM9 219 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 ARL6IP6Q8N6S5 226 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 NUDT10Q8NFP7 164 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 OR10G8Q8NGN5 311 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 NUDT11Q96G61 164 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 PRR25Q96S07 402 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 CMYA5Q8N3K9 4069 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 H7BYZ3 331 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 FRMD6-AS1P0C7T7 363 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 ZNF688P0C7X2 276 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 ERVFC1-1P60608 527 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 CD300EQ496F6 205 aaPredicted RBP6.23□□□□□ -1.41
GTF3A-206ENST00000470606 ANAPC16Q96DE5 110 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 MRPL53Q96EL3 112 aaKnown RBP6.23□□□□□ -1.41
GTF3A-206ENST00000470606 CTDSP1Q9GZU7 261 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 PRELID1Q9Y255 219 aa6.23□□□□□ -1.41
GTF3A-206ENST00000470606 RBAKDNA6NC62 111 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 CXorf65A6NEN9 183 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 OVOL1O14753 267 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 S100A9P06702 114 aaKnown RBP6.22□□□□□ -1.41
GTF3A-206ENST00000470606 KIR3DS1Q14943 382 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 IBA57Q5T440 356 aaKnown RBP6.22□□□□□ -1.41
GTF3A-206ENST00000470606 C9orf47Q6ZRZ4 202 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 COX8CQ7Z4L0 72 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 NDUFA11Q86Y39 141 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 ZNF738Q8NE65 137 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 SMIM12Q96EX1 92 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 CITED1Q99966 193 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 OSTCQ9NRP0 149 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 PEMTQ9UBM1 199 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 ZFP30Q9Y2G7 519 aa6.22□□□□□ -1.41
GTF3A-206ENST00000470606 SERTM2A0A1B0GWG4 89 aa6.21□□□□□ -1.41
GTF3A-206ENST00000470606 K7EQM0 130 aa6.21□□□□□ -1.41
GTF3A-206ENST00000470606 CT45A10P0DMU9 189 aa6.21□□□□□ -1.41
GTF3A-206ENST00000470606 RPL19P84098 196 aaKnown RBP6.21□□□□□ -1.41
GTF3A-206ENST00000470606 ZNF124Q15973 351 aa6.21□□□□□ -1.41
GTF3A-206ENST00000470606 PRR9Q5T870 116 aa6.21□□□□□ -1.41
GTF3A-206ENST00000470606 FAM231DQ6ZW35 169 aa6.21□□□□□ -1.41
GTF3A-206ENST00000470606 C15orf54Q8N8G6 183 aa6.21□□□□□ -1.41
GTF3A-206ENST00000470606 PYGO2Q9BRQ0 406 aa6.21□□□□□ -1.41
GTF3A-206ENST00000470606 ZNF256Q9Y2P7 627 aaPredicted RBP6.21□□□□□ -1.41
GTF3A-206ENST00000470606 TMA7Q9Y2S6 64 aaKnown RBP6.21□□□□□ -1.41
GTF3A-206ENST00000470606 A0A1B0GUS0 222 aa6.21□□□□□ -1.42
GTF3A-206ENST00000470606 NPIPB6E9PJ23 425 aa6.21□□□□□ -1.42
GTF3A-206ENST00000470606 PSMG4Q5JS54 123 aa6.21□□□□□ -1.42
GTF3A-206ENST00000470606 OR8A1Q8NGG7 326 aa6.21□□□□□ -1.42
GTF3A-206ENST00000470606 ZNF492Q9P255 531 aa6.21□□□□□ -1.42
GTF3A-206ENST00000470606 GZMBP10144 247 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 CD33P20138 364 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 RAB5AP20339 215 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 ZFAND2AQ8N6M9 145 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 LINC00482Q8N8I6 264 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 GTSF1Q8WW33 167 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 FAM19A4Q96LR4 140 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 PPP1R14DQ9NXH3 145 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 SIGLEC8Q9NYZ4 499 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 IL36BQ9NZH7 164 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 C11orf21Q9P2W6 132 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 NBEAL2Q6ZNJ1 2754 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 NOTCH1P46531 2555 aa6.2□□□□□ -1.42
GTF3A-206ENST00000470606 TRBV24-1A0A075B6N3 115 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 A0A1W2PPQ1 181 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 SMIM27A0A1W2PRY6 76 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 ZNF705GA8MUZ8 300 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-206ENST00000470606 M0QZ24 198 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 PPP1R2P9O14990 202 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 BMI1P35226 326 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 ZNF138P52744 262 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 TCL1AP56279 114 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 HIST1H1AQ02539 215 aaPredicted RBP6.19□□□□□ -1.42
GTF3A-206ENST00000470606 CLEC5AQ9NY25 188 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 NBEAL1Q6ZS30 2694 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 A0A0J9YX75 114 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 PHOX2AO14813 284 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 SH2D1AO60880 128 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 SAPCD1Q5SSQ6 148 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 IMMP2LQ96T52 175 aa6.19□□□□□ -1.42
GTF3A-206ENST00000470606 ANK2Q01484 3957 aa6.18□□□□□ -1.42
GTF3A-206ENST00000470606 GATCO43716 136 aaKnown RBP6.18□□□□□ -1.42
GTF3A-206ENST00000470606 SPINK4O60575 86 aa6.18□□□□□ -1.42
GTF3A-206ENST00000470606 SAP30O75446 220 aa6.18□□□□□ -1.42
GTF3A-206ENST00000470606 IGLV1-51P01701 117 aa6.18□□□□□ -1.42
GTF3A-206ENST00000470606 ODF3L2Q3SX64 289 aa6.18□□□□□ -1.42
GTF3A-206ENST00000470606 TMEM78Q5T7P6 136 aa6.18□□□□□ -1.42
GTF3A-206ENST00000470606 RBPMS2Q6ZRY4 209 aaKnown RBP6.18□□□□□ -1.42
GTF3A-206ENST00000470606 DYNLRB2Q8TF09 96 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms