RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 FAM19A4Q96LR4 140 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 LINC00477Q96M19 166 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 ODF3Q96PU9 254 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 SPATA25Q9BR10 227 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 OVOL2Q9BRP0 275 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 NKX6-2Q9C056 277 aaPredicted RBP7.7□□□□□ -1.18
SMC1A-206ENST00000470241 ZNF492Q9P255 531 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 GNG13Q9P2W3 67 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 XCL2Q9UBD3 114 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 M0R2Z0 102 aa7.69□□□□□ -1.18
SMC1A-206ENST00000470241 IFNA7P01567 189 aa7.69□□□□□ -1.18
SMC1A-206ENST00000470241 NHLRC4P0CG21 123 aaPredicted RBP7.69□□□□□ -1.18
SMC1A-206ENST00000470241 KIR3DS1Q14943 382 aa7.69□□□□□ -1.18
SMC1A-206ENST00000470241 Q8TAT8 98 aa7.69□□□□□ -1.18
SMC1A-206ENST00000470241 PCNPQ8WW12 178 aaKnown RBP7.69□□□□□ -1.18
SMC1A-206ENST00000470241 RNF183Q96D59 192 aa7.69□□□□□ -1.18
SMC1A-206ENST00000470241 RCHY1Q96PM5 261 aa7.69□□□□□ -1.18
SMC1A-206ENST00000470241 ATG101Q9BSB4 218 aa7.69□□□□□ -1.18
SMC1A-206ENST00000470241 MANBALQ9NQG1 85 aa7.69□□□□□ -1.18
SMC1A-206ENST00000470241 PPP1R14DQ9NXH3 145 aa7.69□□□□□ -1.18
SMC1A-206ENST00000470241 TP53TG1Q9Y2A0 90 aa7.69□□□□□ -1.18
SMC1A-206ENST00000470241 AGRNO00468 2067 aa7.69□□□□□ -1.18
SMC1A-206ENST00000470241 TRAV12-2A0A075B6T6 113 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 TRAV8-1A0A0A6YYK1 113 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 SERTM2A0A1B0GWG4 89 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 PEX7O00628 323 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 SPRY2O43597 315 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 IGLV2-11P01706 119 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 NMBP08949 121 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 ZNF138P52744 262 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 TMEM78Q5T7P6 136 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 CYB561D1Q8N8Q1 229 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 HIST1H2BAQ96A08 127 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 IGF2BP2-AS1Q96M15 143 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 C1QTNF4Q9BXJ3 329 aa7.68□□□□□ -1.18
SMC1A-206ENST00000470241 KLLNB2CW77 178 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 C11orf94C9JXX5 98 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 AMBPP02760 352 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 RBMY1A1P0DJD3 496 aaKnown RBP7.67□□□□□ -1.18
SMC1A-206ENST00000470241 RBMY1CP0DJD4 496 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 BCL2P10415 239 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 CRISP2P16562 243 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 TSPOP30536 169 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 LEPP41159 167 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 CDKN1BP46527 198 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 IFITM2Q01629 132 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 RBMY1FQ15415 496 aaKnown RBP7.67□□□□□ -1.18
SMC1A-206ENST00000470241 GFI1BQ5VTD9 330 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 C1orf158Q8N1D5 194 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 ZFAND2AQ8N6M9 145 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 TVP23CQ96ET8 276 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 SGK494Q96LW2 274 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 LINC00479Q96M42 142 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 TCEAL7Q9BRU2 100 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 ZMAT4Q9H898 229 aa7.67□□□□□ -1.18
SMC1A-206ENST00000470241 TRAV34A0A0B4J273 112 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 TRBV7-9A0A0J9YWB2 115 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 LOC102723971A0A1B0GUV8 181 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 SCO2A0A1W2PP80 73 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 J3KRW8 73 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 K7EQM0 130 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 INSP01308 110 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 IFNA1P01562 189 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 PRR9Q5T870 116 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 ZNF705AQ6ZN79 300 aaPredicted RBP7.66□□□□□ -1.18
SMC1A-206ENST00000470241 TMEM75Q8N9X5 138 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 PSG8Q9UQ74 426 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 LENEPQ9Y5L5 61 aa7.66□□□□□ -1.18
SMC1A-206ENST00000470241 FBLL1A6NHQ2 334 aaKnown RBP7.65□□□□□ -1.18
SMC1A-206ENST00000470241 F6UZH7 168 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 FLI1Q01543 452 aaPredicted RBP7.65□□□□□ -1.18
SMC1A-206ENST00000470241 MEF2BQ02080 365 aaPredicted RBP7.65□□□□□ -1.18
SMC1A-206ENST00000470241 PRNTQ86SH4 94 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 OR11H2Q8NH07 326 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 C2CD4CQ8TF44 421 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 C11orf52Q96A22 123 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 RARRES2Q99969 163 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 TXNDC17Q9BRA2 123 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 VAX2Q9UIW0 290 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 GOLT1BQ9Y3E0 138 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 KLF12Q9Y4X4 402 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 U3KQK5 164 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 X6R8D5 127 aa7.65□□□□□ -1.18
SMC1A-206ENST00000470241 IGHV3OR16-12A0A075B7B8 117 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 TRBV6-1A0A0K0K1D8 114 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 C7orf71A4D174 169 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 RBFOX3A6NFN3 312 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 GPX1P07203 203 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 RNASE4P34096 147 aaKnown RBP7.64□□□□□ -1.19
SMC1A-206ENST00000470241 TAGLN2P37802 199 aaKnown RBP7.64□□□□□ -1.19
SMC1A-206ENST00000470241 AKR1C3P42330 323 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 BTN1A1Q13410 526 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 TMEM183BQ1AE95 376 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 ZNF506Q5JVG8 444 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 ZNF767PQ75MW2 155 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 Q86TA4 180 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 TREM1Q9NP99 234 aa7.64□□□□□ -1.19
SMC1A-206ENST00000470241 TRAV12-3A0A0B4J271 114 aa7.63□□□□□ -1.19
SMC1A-206ENST00000470241 PDE6DO43924 150 aa7.63□□□□□ -1.19
SMC1A-206ENST00000470241 ZNF324O75467 553 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms