RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 NDUFB4O95168 129 aa11.58□□□□□ -0.56
GTF3C2-209ENST00000470115 HIST1H1EP10412 219 aaKnown RBP11.58□□□□□ -0.56
GTF3C2-209ENST00000470115 ACOT6Q3I5F7 207 aaPredicted RBP11.58□□□□□ -0.56
GTF3C2-209ENST00000470115 GFI1BQ5VTD9 330 aa11.58□□□□□ -0.56
GTF3C2-209ENST00000470115 BLNKQ8WV28 456 aa11.58□□□□□ -0.56
GTF3C2-209ENST00000470115 SH3BGRL3Q9H299 93 aa11.58□□□□□ -0.56
GTF3C2-209ENST00000470115 DNAH17Q9UFH2 4485 aa11.58□□□□□ -0.56
GTF3C2-209ENST00000470115 H7BYZ3 331 aa11.57□□□□□ -0.56
GTF3C2-209ENST00000470115 J3KRW8 73 aa11.57□□□□□ -0.56
GTF3C2-209ENST00000470115 MIR17HGQ75NE6 70 aa11.57□□□□□ -0.56
GTF3C2-209ENST00000470115 C16orf74Q96GX8 76 aa11.57□□□□□ -0.56
GTF3C2-209ENST00000470115 PSMG3Q9BT73 122 aaPredicted RBP11.57□□□□□ -0.56
GTF3C2-209ENST00000470115 SLC25A2Q9BXI2 301 aa11.57□□□□□ -0.56
GTF3C2-209ENST00000470115 MRPL32Q9BYC8 188 aaKnown RBP11.57□□□□□ -0.56
GTF3C2-209ENST00000470115 A0A1W2PPV4 95 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 LEPP41159 167 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 RAB2AP61019 212 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 ERCC8Q13216 396 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 FAM122CQ6P4D5 195 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 ZNF493Q6ZR52 646 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 UBE2DNLQ8IWF7 75 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 OR10G4Q8NGN3 311 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 OR10G9Q8NGN4 311 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 OR10G7Q8NGN6 311 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 OR2G3Q8NGZ4 309 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 MRPL53Q96EL3 112 aaKnown RBP11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 FAM167A-AS1Q96KT0 104 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 C20orf144Q9BQM9 153 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 NOP10Q9NPE3 64 aaKnown RBP11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 CYTL1Q9NRR1 136 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 FUT9Q9Y231 359 aa11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 TIMM8BQ9Y5J9 83 aaPredicted RBP11.56□□□□□ -0.56
GTF3C2-209ENST00000470115 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 CBY3A6NI87 242 aa11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 M0R2N4 97 aa11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 M6PRP20645 277 aa11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 SERF2P84101 59 aa11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 PDE6HQ13956 83 aa11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 LGALSLQ3ZCW2 172 aaPredicted RBP11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 EXOC3-AS1Q8N2X6 119 aa11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 RNASE8Q8TDE3 154 aaKnown RBP11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 TMEM263Q8WUH6 116 aaKnown RBP11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 ODF3Q96PU9 254 aa11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 PRELID1Q9Y255 219 aa11.55□□□□□ -0.56
GTF3C2-209ENST00000470115 F5H768 121 aa11.54□□□□□ -0.56
GTF3C2-209ENST00000470115 OR7C2O60412 319 aa11.54□□□□□ -0.56
GTF3C2-209ENST00000470115 MBP02144 154 aa11.54□□□□□ -0.56
GTF3C2-209ENST00000470115 ATP5G1P05496 136 aa11.54□□□□□ -0.56
GTF3C2-209ENST00000470115 NBEAP1P0C6P0 100 aa11.54□□□□□ -0.56
GTF3C2-209ENST00000470115 ATP5G3P48201 142 aa11.54□□□□□ -0.56
GTF3C2-209ENST00000470115 EIF5AP63241 154 aaKnown RBP11.54□□□□□ -0.56
GTF3C2-209ENST00000470115 CCDC28AQ8IWP9 274 aa11.54□□□□□ -0.56
GTF3C2-209ENST00000470115 OR51M1Q9H341 326 aa11.54□□□□□ -0.56
GTF3C2-209ENST00000470115 FAT2Q9NYQ8 4349 aa11.54□□□□□ -0.56
GTF3C2-209ENST00000470115 EIF3GO75821 320 aaKnown RBP eCLIP11.53□□□□□ -0.56
GTF3C2-209ENST00000470115 TAS2R45P59539 299 aa11.53□□□□□ -0.56
GTF3C2-209ENST00000470115 ICAM4Q14773 271 aa11.53□□□□□ -0.56
GTF3C2-209ENST00000470115 RNF212Q495C1 297 aa11.53□□□□□ -0.56
GTF3C2-209ENST00000470115 KHDC3LQ587J8 217 aa11.53□□□□□ -0.56
GTF3C2-209ENST00000470115 AKR1C8PQ5T2L2 129 aa11.53□□□□□ -0.56
GTF3C2-209ENST00000470115 C15orf53Q8NAA6 179 aa11.53□□□□□ -0.56
GTF3C2-209ENST00000470115 LINC00477Q96M19 166 aa11.53□□□□□ -0.56
GTF3C2-209ENST00000470115 AGPAT4-IT1Q9H0P7 198 aa11.53□□□□□ -0.56
GTF3C2-209ENST00000470115 AAMDCQ9H7C9 122 aa11.53□□□□□ -0.56
GTF3C2-209ENST00000470115 HMGB3O15347 200 aaKnown RBP11.52□□□□□ -0.57
GTF3C2-209ENST00000470115 OR10J4P0C629 311 aa11.52□□□□□ -0.57
GTF3C2-209ENST00000470115 TPT1P13693 172 aaKnown RBP11.52□□□□□ -0.57
GTF3C2-209ENST00000470115 CDC34P49427 236 aaPredicted RBP11.52□□□□□ -0.57
GTF3C2-209ENST00000470115 NKX2-5P52952 324 aaPredicted RBP11.52□□□□□ -0.57
GTF3C2-209ENST00000470115 PAXXQ9BUH6 204 aa11.52□□□□□ -0.57
GTF3C2-209ENST00000470115 IGLV2-18A0A075B6J9 118 aa11.51□□□□□ -0.57
GTF3C2-209ENST00000470115 SLC25A5P05141 298 aaKnown RBP11.51□□□□□ -0.57
GTF3C2-209ENST00000470115 C9orf62Q8N4C0 152 aa11.51□□□□□ -0.57
GTF3C2-209ENST00000470115 RNF141Q8WVD5 230 aa11.51□□□□□ -0.57
GTF3C2-209ENST00000470115 FXYD5Q96DB9 178 aa11.51□□□□□ -0.57
GTF3C2-209ENST00000470115 ACTR3CQ9C0K3 210 aaPredicted RBP11.51□□□□□ -0.57
GTF3C2-209ENST00000470115 IGKV2-40A0A087WW87 121 aaPredicted RBP11.5□□□□□ -0.57
GTF3C2-209ENST00000470115 C7orf71A4D174 169 aa11.5□□□□□ -0.57
GTF3C2-209ENST00000470115 IGKV2D-40P01614 121 aaPredicted RBP11.5□□□□□ -0.57
GTF3C2-209ENST00000470115 RNASE4P34096 147 aaKnown RBP11.5□□□□□ -0.57
GTF3C2-209ENST00000470115 UBE2L3P68036 154 aaKnown RBP11.5□□□□□ -0.57
GTF3C2-209ENST00000470115 LGALS9BQ3B8N2 356 aa11.5□□□□□ -0.57
GTF3C2-209ENST00000470115 C9orf47Q6ZRZ4 202 aa11.5□□□□□ -0.57
GTF3C2-209ENST00000470115 FAM19A4Q96LR4 140 aa11.5□□□□□ -0.57
GTF3C2-209ENST00000470115 VGLL1Q99990 258 aa11.5□□□□□ -0.57
GTF3C2-209ENST00000470115 PYGO2Q9BRQ0 406 aa11.5□□□□□ -0.57
GTF3C2-209ENST00000470115 SNURFLB1AK76 121 aa11.49□□□□□ -0.57
GTF3C2-209ENST00000470115 KLLNB2CW77 178 aa11.49□□□□□ -0.57
GTF3C2-209ENST00000470115 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
GTF3C2-209ENST00000470115 NUDT3O95989 172 aa11.49□□□□□ -0.57
GTF3C2-209ENST00000470115 BTN1A1Q13410 526 aa11.49□□□□□ -0.57
GTF3C2-209ENST00000470115 TMEM78Q5T7P6 136 aa11.49□□□□□ -0.57
GTF3C2-209ENST00000470115 LINC00336Q6ZUF6 198 aa11.49□□□□□ -0.57
GTF3C2-209ENST00000470115 IQCF2Q8IXL9 164 aa11.49□□□□□ -0.57
GTF3C2-209ENST00000470115 RAB24Q969Q5 203 aa11.49□□□□□ -0.57
GTF3C2-209ENST00000470115 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
GTF3C2-209ENST00000470115 PHYHIPLQ96FC7 376 aa11.49□□□□□ -0.57
GTF3C2-209ENST00000470115 GAGE12BA1L429 117 aa11.48□□□□□ -0.57
GTF3C2-209ENST00000470115 RTL8CO15255 209 aa11.48□□□□□ -0.57
GTF3C2-209ENST00000470115 GAGE7O76087 117 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms