RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 TM2D3Q9BRN9 247 aa10.79□□□□□ -0.68
COL9A3-209ENST00000469852 XCL2Q9UBD3 114 aa10.79□□□□□ -0.68
COL9A3-209ENST00000469852 EPDR1Q9UM22 224 aa10.79□□□□□ -0.68
COL9A3-209ENST00000469852 TRAV12-2A0A075B6T6 113 aa10.78□□□□□ -0.68
COL9A3-209ENST00000469852 CRXO43186 299 aaPredicted RBP10.78□□□□□ -0.68
COL9A3-209ENST00000469852 IFNA7P01567 189 aa10.78□□□□□ -0.68
COL9A3-209ENST00000469852 CSNK1G2-AS1Q8NCQ2 148 aa10.78□□□□□ -0.68
COL9A3-209ENST00000469852 FAM19A4Q96LR4 140 aa10.78□□□□□ -0.68
COL9A3-209ENST00000469852 LINC00479Q96M42 142 aa10.78□□□□□ -0.68
COL9A3-209ENST00000469852 ARL2-SNX15V9GYD0 113 aa10.78□□□□□ -0.68
COL9A3-209ENST00000469852 RBAKDNA6NC62 111 aa10.77□□□□□ -0.69
COL9A3-209ENST00000469852 TEX46H3BTG2 121 aa10.77□□□□□ -0.69
COL9A3-209ENST00000469852 NMBP08949 121 aa10.77□□□□□ -0.69
COL9A3-209ENST00000469852 PPT1P50897 306 aa10.77□□□□□ -0.69
COL9A3-209ENST00000469852 ARL6IP6Q8N6S5 226 aa10.77□□□□□ -0.69
COL9A3-209ENST00000469852 OVOL2Q9BRP0 275 aa10.77□□□□□ -0.69
COL9A3-209ENST00000469852 MANBALQ9NQG1 85 aa10.77□□□□□ -0.69
COL9A3-209ENST00000469852 ZNF492Q9P255 531 aa10.77□□□□□ -0.69
COL9A3-209ENST00000469852 TRAV34A0A0B4J273 112 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 C11orf94C9JXX5 98 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 J3KRW8 73 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 PEX7O00628 323 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 UBE2CO00762 179 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 IGLV2-11P01706 119 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 RBMY1A1P0DJD3 496 aaKnown RBP10.76□□□□□ -0.69
COL9A3-209ENST00000469852 RBMY1CP0DJD4 496 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 NUTF2P61970 127 aaKnown RBP10.76□□□□□ -0.69
COL9A3-209ENST00000469852 RBMY1FQ15415 496 aaKnown RBP10.76□□□□□ -0.69
COL9A3-209ENST00000469852 TMEM78Q5T7P6 136 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 PRR9Q5T870 116 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 TVP23CQ96ET8 276 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 LINC00477Q96M19 166 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 ATG101Q9BSB4 218 aa10.76□□□□□ -0.69
COL9A3-209ENST00000469852 NKX6-2Q9C056 277 aaPredicted RBP10.76□□□□□ -0.69
COL9A3-209ENST00000469852 SCO2A0A1W2PP80 73 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 BCL2P10415 239 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 ZNF138P52744 262 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 PMS2P11Q13670 270 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 Q6ZWC4 215 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 C1orf158Q8N1D5 194 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 CYB561D1Q8N8Q1 229 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 RNF183Q96D59 192 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 ODF3Q96PU9 254 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 RARRES2Q99969 163 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 SPATA25Q9BR10 227 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 PPP1R14DQ9NXH3 145 aa10.75□□□□□ -0.69
COL9A3-209ENST00000469852 LOC102723971A0A1B0GUV8 181 aa10.74□□□□□ -0.69
COL9A3-209ENST00000469852 CDKN1BP46527 198 aa10.74□□□□□ -0.69
COL9A3-209ENST00000469852 GFI1BQ5VTD9 330 aa10.74□□□□□ -0.69
COL9A3-209ENST00000469852 Q6ZQT7 251 aa10.74□□□□□ -0.69
COL9A3-209ENST00000469852 ZFAND2AQ8N6M9 145 aa10.74□□□□□ -0.69
COL9A3-209ENST00000469852 KMT2CQ8NEZ4 4911 aaKnown RBP10.74□□□□□ -0.69
COL9A3-209ENST00000469852 SERTM2A0A1B0GWG4 89 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 SPRY2O43597 315 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 IFNA1P01562 189 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 CRISP2P16562 243 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 LEPP41159 167 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 BTN1A1Q13410 526 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 TMEM75Q8N9X5 138 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 C2CD4CQ8TF44 421 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 HIST1H2BAQ96A08 127 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 IGF2BP2-AS1Q96M15 143 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 RCHY1Q96PM5 261 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 C1QTNF4Q9BXJ3 329 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 PSG8Q9UQ74 426 aa10.73□□□□□ -0.69
COL9A3-209ENST00000469852 KLLNB2CW77 178 aa10.72□□□□□ -0.69
COL9A3-209ENST00000469852 FLI1Q01543 452 aaPredicted RBP10.72□□□□□ -0.69
COL9A3-209ENST00000469852 MEF2BQ02080 365 aaPredicted RBP10.72□□□□□ -0.69
COL9A3-209ENST00000469852 PRNTQ86SH4 94 aa10.72□□□□□ -0.69
COL9A3-209ENST00000469852 C8orf49Q96NF6 230 aa10.72□□□□□ -0.69
COL9A3-209ENST00000469852 VAX2Q9UIW0 290 aa10.72□□□□□ -0.69
COL9A3-209ENST00000469852 TP53TG1Q9Y2A0 90 aa10.72□□□□□ -0.69
COL9A3-209ENST00000469852 X6R8D5 127 aa10.72□□□□□ -0.69
COL9A3-209ENST00000469852 IGHV3OR16-12A0A075B7B8 117 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 RBFOX3A6NFN3 312 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 F6UZH7 168 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 INSP01308 110 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 AMBPP02760 352 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 PRM2P04554 102 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 NHLRC4P0CG21 123 aaPredicted RBP10.71□□□□□ -0.69
COL9A3-209ENST00000469852 TSPOP30536 169 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 TOR2AQ5JU69 321 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 ZNF506Q5JVG8 444 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 ZNF705AQ6ZN79 300 aaPredicted RBP10.71□□□□□ -0.69
COL9A3-209ENST00000469852 ZNF767PQ75MW2 155 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 Q86TA4 180 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 STAB2Q8WWQ8 2551 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 C11orf52Q96A22 123 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 FAM210AQ96ND0 272 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 TCEAL7Q9BRU2 100 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 DERL1Q9BUN8 251 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 ZMAT4Q9H898 229 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 KLF12Q9Y4X4 402 aa10.71□□□□□ -0.69
COL9A3-209ENST00000469852 TRAV12-3A0A0B4J271 114 aa10.7□□□□□ -0.7
COL9A3-209ENST00000469852 C7orf71A4D174 169 aa10.7□□□□□ -0.7
COL9A3-209ENST00000469852 K7EQM0 130 aa10.7□□□□□ -0.7
COL9A3-209ENST00000469852 GPX1P07203 203 aa10.7□□□□□ -0.7
COL9A3-209ENST00000469852 RNASE4P34096 147 aaKnown RBP10.7□□□□□ -0.7
COL9A3-209ENST00000469852 AKR1C3P42330 323 aa10.7□□□□□ -0.7
COL9A3-209ENST00000469852 OR11H2Q8NH07 326 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms