RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 CHAC1Q9BUX1 264 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 GFRA4Q9GZZ7 299 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 WNK1Q9H4A3 2382 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 WI2-2373I1.2A0A1W2PRP0 233 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 CNTFRP26992 372 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 SLC25A48Q6ZT89 311 aaKnown RBP6.29□□□□□ -1.4
TPM3-215ENST00000469717 GLMPQ8WWB7 406 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 MSRB1Q9NZV6 116 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 HIVEP2P31629 2446 aa6.29□□□□□ -1.4
TPM3-215ENST00000469717 C5orf47Q569G3 176 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 OR4X2Q8NGF9 303 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 OR10X1Q8NGY0 326 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 TRAV25A0A0B4J276 109 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 GATA1P15976 413 aaPredicted RBP6.28□□□□□ -1.4
TPM3-215ENST00000469717 EVI2AP22794 236 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 MRPL51Q4U2R6 128 aaKnown RBP6.28□□□□□ -1.4
TPM3-215ENST00000469717 RAX2Q96IS3 184 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 UFC1Q9Y3C8 167 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 TRBV25-1A0A075B6N4 114 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 SCGB2A1O75556 95 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 RIGQ13278 110 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 Q6ZT83 130 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 TMEM75Q8N9X5 138 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 THAP8Q8NA92 274 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 PSG8Q9UQ74 426 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 LINC01548A6NM66 108 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 HBDP02042 147 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 FCER1GP30273 86 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 RPL32P62910 135 aaKnown RBP6.28□□□□□ -1.4
TPM3-215ENST00000469717 CCL8P80075 99 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 FAM169BQ8N8A8 192 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 MAPKAPK5-AS1Q8N8E1 139 aa6.28□□□□□ -1.4
TPM3-215ENST00000469717 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.28□□□□□ -1.4
TPM3-215ENST00000469717 ACANP16112 2415 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 ENSAO43768 121 aaKnown RBP6.27□□□□□ -1.41
TPM3-215ENST00000469717 FCN3O75636 299 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 PRB1P04280 392 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 KIR2DL2P43627 348 aaPredicted RBP6.27□□□□□ -1.41
TPM3-215ENST00000469717 C9orf106Q8NAJ2 232 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 IGFBPL1Q8WX77 278 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 GAFA1Q96PS6 74 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 HHLA3Q9XRX5 114 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 TMEM189A5PLL7 270 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 PAX8Q06710 450 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 PIP4P1Q86T03 277 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 TMEM133Q9H2Q1 129 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 IGFL4Q6B9Z1 124 aa6.27□□□□□ -1.41
TPM3-215ENST00000469717 DOPEY1Q5JWR5 2465 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 IGLL5B9A064 214 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 GAGE5Q13069 117 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 GAGE6Q13070 117 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 FHL3Q13643 280 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 MRGPRG-AS1Q2M3A8 158 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 FAM104BQ5XKR9 115 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 UBTD1Q9HAC8 227 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 MSRB2Q9Y3D2 182 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 ARHGAP32A7KAX9 2087 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 LHBP01229 141 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 IGLV2-23P01705 113 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 PRSS1P07477 247 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 CKS2P33552 79 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 ZC2HC1BQ5TFG8 222 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 ORMDL3Q8N138 153 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 Q8TAT8 98 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 SLC25A39Q9BZJ4 359 aaPredicted RBP6.26□□□□□ -1.41
TPM3-215ENST00000469717 J3QR89 54 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 TM4SF5O14894 197 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 RBP4P02753 201 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 MDS2Q8NDY4 140 aa6.26□□□□□ -1.41
TPM3-215ENST00000469717 OSR1Q8TAX0 266 aaPredicted RBP6.26□□□□□ -1.41
TPM3-215ENST00000469717 FOXI2Q6ZQN5 318 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 PTH2Q96A98 100 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 FOXC2Q99958 501 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 PIMREGQ9BSJ6 248 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 TMEM160Q9NX00 188 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 HIGD1AQ9Y241 93 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 E9PLD3 99 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 M0QXV9 152 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 LEPP41159 167 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 KLRB1Q12918 225 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 MBNL2Q5VZF2 373 aaKnown RBP6.25□□□□□ -1.41
TPM3-215ENST00000469717 ZNF833PQ6ZTB9 187 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 C22orf34Q6ZV56 151 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 TMEM167AQ8TBQ9 72 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 SPATA25Q9BR10 227 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 SRSF8Q9BRL6 282 aaKnown RBP6.25□□□□□ -1.41
TPM3-215ENST00000469717 IGKV2-40A0A087WW87 121 aaPredicted RBP6.25□□□□□ -1.41
TPM3-215ENST00000469717 TRAV40A0A0B4J280 105 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 IGKV2D-40P01614 121 aaPredicted RBP6.25□□□□□ -1.41
TPM3-215ENST00000469717 TWIST1Q15672 202 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 C8orf46Q8TAG6 207 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 OTORQ9NRC9 128 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 MRPL16Q9NX20 251 aaKnown RBP6.25□□□□□ -1.41
TPM3-215ENST00000469717 CTSZQ9UBR2 303 aa6.25□□□□□ -1.41
TPM3-215ENST00000469717 A0A1B0GWB2 263 aa6.24□□□□□ -1.41
TPM3-215ENST00000469717 MT-ATP8P03928 68 aa6.24□□□□□ -1.41
TPM3-215ENST00000469717 CEND1Q8N111 149 aa6.24□□□□□ -1.41
TPM3-215ENST00000469717 SYT8Q8NBV8 401 aa6.24□□□□□ -1.41
TPM3-215ENST00000469717 OR4C13Q8NGP0 309 aa6.24□□□□□ -1.41
TPM3-215ENST00000469717 IGHV3OR16-8A0A075B7F1 116 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms