RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 C10orf113Q5VZT2 155 aa12.2□□□□□ -0.46
TTC28-205ENST00000469670 TMEM14EPQ6UXP3 125 aa12.2□□□□□ -0.46
TTC28-205ENST00000469670 OR10P1Q8NGE3 313 aa12.2□□□□□ -0.46
TTC28-205ENST00000469670 PCNPQ8WW12 178 aaKnown RBP12.2□□□□□ -0.46
TTC28-205ENST00000469670 SMIM8Q96KF7 97 aa12.2□□□□□ -0.46
TTC28-205ENST00000469670 FAM19A4Q96LR4 140 aa12.2□□□□□ -0.46
TTC28-205ENST00000469670 M0R3E3 92 aa12.19□□□□□ -0.46
TTC28-205ENST00000469670 RGS13O14921 159 aa12.19□□□□□ -0.46
TTC28-205ENST00000469670 OR4E1P0C645 316 aa12.19□□□□□ -0.46
TTC28-205ENST00000469670 GYPEP15421 78 aa12.19□□□□□ -0.46
TTC28-205ENST00000469670 FAUP35544 74 aaKnown RBP12.19□□□□□ -0.46
TTC28-205ENST00000469670 ZNF415Q09FC8 603 aa12.19□□□□□ -0.46
TTC28-205ENST00000469670 LINC00477Q96M19 166 aa12.19□□□□□ -0.46
TTC28-205ENST00000469670 RCL1Q9Y2P8 373 aaKnown RBP12.19□□□□□ -0.46
TTC28-205ENST00000469670 TRAV5A0A0B4J249 113 aa12.18□□□□□ -0.46
TTC28-205ENST00000469670 GPX1P07203 203 aa12.18□□□□□ -0.46
TTC28-205ENST00000469670 MRPL53Q96EL3 112 aaKnown RBP12.18□□□□□ -0.46
TTC28-205ENST00000469670 ARPC5LQ9BPX5 153 aa12.18□□□□□ -0.46
TTC28-205ENST00000469670 AGPAT4-IT1Q9H0P7 198 aa12.18□□□□□ -0.46
TTC28-205ENST00000469670 IGHV1OR15-1A0A075B7D0 117 aa12.17□□□□□ -0.46
TTC28-205ENST00000469670 ZNF253O75346 499 aa12.17□□□□□ -0.46
TTC28-205ENST00000469670 ORM1P02763 201 aa12.17□□□□□ -0.46
TTC28-205ENST00000469670 SFTA3P0C7M3 94 aa12.17□□□□□ -0.46
TTC28-205ENST00000469670 CRISP2P16562 243 aa12.17□□□□□ -0.46
TTC28-205ENST00000469670 SPCS2Q15005 226 aa12.17□□□□□ -0.46
TTC28-205ENST00000469670 Q6ZSA8 131 aa12.17□□□□□ -0.46
TTC28-205ENST00000469670 IQCF2Q8IXL9 164 aa12.17□□□□□ -0.46
TTC28-205ENST00000469670 MGST2Q99735 147 aa12.17□□□□□ -0.46
TTC28-205ENST00000469670 TXNDC17Q9BRA2 123 aa12.17□□□□□ -0.46
TTC28-205ENST00000469670 Q6ZQT7 251 aa12.16□□□□□ -0.46
TTC28-205ENST00000469670 ZNF479Q96JC4 524 aa12.16□□□□□ -0.46
TTC28-205ENST00000469670 SLC25A21Q9BQT8 299 aaPredicted RBP12.16□□□□□ -0.46
TTC28-205ENST00000469670 DNAJC4Q9NNZ3 241 aa12.16□□□□□ -0.46
TTC28-205ENST00000469670 IGHV3-38A0A0C4DH36 116 aa12.15□□□□□ -0.46
TTC28-205ENST00000469670 IBA57-AS1B1ANH7 110 aa12.15□□□□□ -0.46
TTC28-205ENST00000469670 OXTP01178 125 aa12.15□□□□□ -0.46
TTC28-205ENST00000469670 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
TTC28-205ENST00000469670 PRR9Q5T870 116 aa12.15□□□□□ -0.46
TTC28-205ENST00000469670 MCFD2Q8NI22 146 aa12.15□□□□□ -0.46
TTC28-205ENST00000469670 SOSTQ9BQB4 213 aa12.15□□□□□ -0.46
TTC28-205ENST00000469670 Q9HAA7 133 aa12.15□□□□□ -0.46
TTC28-205ENST00000469670 TRBV19A0A075B6N1 114 aa12.14□□□□□ -0.47
TTC28-205ENST00000469670 NMBP08949 121 aa12.14□□□□□ -0.47
TTC28-205ENST00000469670 ZFAND2AQ8N6M9 145 aa12.14□□□□□ -0.47
TTC28-205ENST00000469670 OR10G4Q8NGN3 311 aa12.14□□□□□ -0.47
TTC28-205ENST00000469670 RAB2BQ8WUD1 216 aa12.14□□□□□ -0.47
TTC28-205ENST00000469670 GGACTQ9BVM4 153 aa12.14□□□□□ -0.47
TTC28-205ENST00000469670 PRELID1Q9Y255 219 aa12.14□□□□□ -0.47
TTC28-205ENST00000469670 FAT3Q8TDW7 4589 aa12.14□□□□□ -0.47
TTC28-205ENST00000469670 FABP12A6NFH5 140 aa12.13□□□□□ -0.47
TTC28-205ENST00000469670 C9JCJ5 164 aa12.13□□□□□ -0.47
TTC28-205ENST00000469670 TSC22D2O75157 780 aa12.13□□□□□ -0.47
TTC28-205ENST00000469670 AP3S2P59780 193 aa12.13□□□□□ -0.47
TTC28-205ENST00000469670 LINC01556Q5JQF7 62 aa12.13□□□□□ -0.47
TTC28-205ENST00000469670 Q6ZRG5 221 aa12.13□□□□□ -0.47
TTC28-205ENST00000469670 C9orf47Q6ZRZ4 202 aa12.13□□□□□ -0.47
TTC28-205ENST00000469670 TOMM5Q8N4H5 51 aa12.13□□□□□ -0.47
TTC28-205ENST00000469670 SCGB1D2O95969 90 aa12.12□□□□□ -0.47
TTC28-205ENST00000469670 CAMLGP49069 296 aa12.12□□□□□ -0.47
TTC28-205ENST00000469670 TAS2R30P59541 319 aa12.12□□□□□ -0.47
TTC28-205ENST00000469670 OR1L4Q8NGR5 311 aa12.12□□□□□ -0.47
TTC28-205ENST00000469670 BLNKQ8WV28 456 aa12.12□□□□□ -0.47
TTC28-205ENST00000469670 TRIM63Q969Q1 353 aa12.12□□□□□ -0.47
TTC28-205ENST00000469670 SRRQ9GZT4 340 aa12.12□□□□□ -0.47
TTC28-205ENST00000469670 C9orf170A2RU37 121 aa12.11□□□□□ -0.47
TTC28-205ENST00000469670 NDUFB4O95168 129 aa12.11□□□□□ -0.47
TTC28-205ENST00000469670 SMIM18P0DKX4 95 aa12.11□□□□□ -0.47
TTC28-205ENST00000469670 TMEM78Q5T7P6 136 aa12.11□□□□□ -0.47
TTC28-205ENST00000469670 MIC13Q5XKP0 118 aa12.11□□□□□ -0.47
TTC28-205ENST00000469670 SLC25A31Q9H0C2 315 aa12.11□□□□□ -0.47
TTC28-205ENST00000469670 TIMM9Q9Y5J7 89 aa12.11□□□□□ -0.47
TTC28-205ENST00000469670 IGKV2-40A0A087WW87 121 aaPredicted RBP12.1□□□□□ -0.47
TTC28-205ENST00000469670 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 IGKV2D-40P01614 121 aaPredicted RBP12.1□□□□□ -0.47
TTC28-205ENST00000469670 HIST1H1EP10412 219 aaKnown RBP12.1□□□□□ -0.47
TTC28-205ENST00000469670 TNFSF8P32971 234 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 PPT1P50897 306 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 TIRAPP58753 221 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 KRTAP10-4P60372 401 aaPredicted RBP12.1□□□□□ -0.47
TTC28-205ENST00000469670 UBE2MP61081 183 aaKnown RBP12.1□□□□□ -0.47
TTC28-205ENST00000469670 RAB31Q13636 194 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 WFDC2Q14508 124 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 SH2D6Q7Z4S9 175 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 NRARPQ7Z6K4 114 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 EXOC3-AS1Q8N2X6 119 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 DYNC2LI1Q8TCX1 351 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 RASL10AQ92737 203 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 PFDN5Q99471 154 aa12.1□□□□□ -0.47
TTC28-205ENST00000469670 SCXQ7RTU7 201 aa12.09□□□□□ -0.47
TTC28-205ENST00000469670 C12orf45Q8N5I9 185 aaPredicted RBP12.09□□□□□ -0.47
TTC28-205ENST00000469670 NHLRC2Q8NBF2 726 aa12.09□□□□□ -0.47
TTC28-205ENST00000469670 TMEM14CQ9P0S9 112 aa12.09□□□□□ -0.47
TTC28-205ENST00000469670 ZNF492Q9P255 531 aa12.09□□□□□ -0.47
TTC28-205ENST00000469670 PDE6HQ13956 83 aa12.08□□□□□ -0.48
TTC28-205ENST00000469670 MUC21Q5SSG8 566 aa12.08□□□□□ -0.48
TTC28-205ENST00000469670 AAMDCQ9H7C9 122 aa12.08□□□□□ -0.48
TTC28-205ENST00000469670 TRAV8-6A0A0B4J262 113 aa12.07□□□□□ -0.48
TTC28-205ENST00000469670 TRAV4A0A0B4J268 109 aa12.07□□□□□ -0.48
TTC28-205ENST00000469670 C7orf66A4D0T2 115 aa12.07□□□□□ -0.48
TTC28-205ENST00000469670 PYYP10082 97 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms