RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 TMEM70Q9BUB7 260 aa13.63□□□□□ -0.23
TRIM46-207ENST00000468878 ZFHX3Q15911 3703 aa13.63□□□□□ -0.23
TRIM46-207ENST00000468878 INS-IGF2F8WCM5 200 aa13.63□□□□□ -0.23
TRIM46-207ENST00000468878 LY6LH3BQJ8 138 aa13.63□□□□□ -0.23
TRIM46-207ENST00000468878 RPL7P18124 248 aaKnown RBP13.63□□□□□ -0.23
TRIM46-207ENST00000468878 MYCNOSP40205 109 aa13.63□□□□□ -0.23
TRIM46-207ENST00000468878 RIPPLY3P57055 190 aa13.63□□□□□ -0.23
TRIM46-207ENST00000468878 AMMECR1LQ6DCA0 310 aa13.63□□□□□ -0.23
TRIM46-207ENST00000468878 FAM231DQ6ZW35 169 aa13.63□□□□□ -0.23
TRIM46-207ENST00000468878 MSRB1Q9NZV6 116 aa13.63□□□□□ -0.23
TRIM46-207ENST00000468878 D6R8Y8 96 aa13.62□□□□□ -0.23
TRIM46-207ENST00000468878 H3BRN7 92 aa13.62□□□□□ -0.23
TRIM46-207ENST00000468878 SCGB2A1O75556 95 aa13.62□□□□□ -0.23
TRIM46-207ENST00000468878 TRAV30A0A087WSZ9 112 aa13.62□□□□□ -0.23
TRIM46-207ENST00000468878 OR11H6Q8NGC7 330 aa13.62□□□□□ -0.23
TRIM46-207ENST00000468878 PRAC2D3DTV9 90 aa13.62□□□□□ -0.23
TRIM46-207ENST00000468878 SH2D1AO60880 128 aa13.62□□□□□ -0.23
TRIM46-207ENST00000468878 PF4V1P10720 104 aa13.62□□□□□ -0.23
TRIM46-207ENST00000468878 FAM106AQ4KMX7 169 aa13.62□□□□□ -0.23
TRIM46-207ENST00000468878 MLST8Q9BVC4 326 aa13.62□□□□□ -0.23
TRIM46-207ENST00000468878 CKS2P33552 79 aa13.61□□□□□ -0.23
TRIM46-207ENST00000468878 ATP5J2P56134 94 aa13.61□□□□□ -0.23
TRIM46-207ENST00000468878 AP5S1Q9NUS5 200 aa13.61□□□□□ -0.23
TRIM46-207ENST00000468878 DOPEY1Q5JWR5 2465 aa13.61□□□□□ -0.23
TRIM46-207ENST00000468878 CTSGP08311 255 aa13.61□□□□□ -0.23
TRIM46-207ENST00000468878 IFI27P40305 119 aaPredicted RBP13.61□□□□□ -0.23
TRIM46-207ENST00000468878 IGHV1-24A0A0C4DH33 117 aa13.61□□□□□ -0.23
TRIM46-207ENST00000468878 NACAE9PAV3 2078 aa13.6□□□□□ -0.23
TRIM46-207ENST00000468878 GOSR1O95249 250 aa13.6□□□□□ -0.23
TRIM46-207ENST00000468878 CRIP1P50238 77 aa13.6□□□□□ -0.23
TRIM46-207ENST00000468878 PIP4P2Q8N4L2 257 aa13.6□□□□□ -0.23
TRIM46-207ENST00000468878 M0R1W7 72 aa13.6□□□□□ -0.23
TRIM46-207ENST00000468878 TRGV3P03979 118 aa13.6□□□□□ -0.23
TRIM46-207ENST00000468878 SPATA12Q7Z6I5 190 aa13.6□□□□□ -0.23
TRIM46-207ENST00000468878 NDFIP1Q9BT67 221 aa13.6□□□□□ -0.23
TRIM46-207ENST00000468878 MAP1LC3CQ9BXW4 147 aa13.6□□□□□ -0.23
TRIM46-207ENST00000468878 IGLV11-55A0A075B6I3 123 aa13.59□□□□□ -0.23
TRIM46-207ENST00000468878 EFNA4P52798 201 aa13.59□□□□□ -0.23
TRIM46-207ENST00000468878 S100A7AQ86SG5 101 aa13.59□□□□□ -0.23
TRIM46-207ENST00000468878 LY6G5BQ8NDX9 201 aa13.59□□□□□ -0.23
TRIM46-207ENST00000468878 Q8N9W7 124 aa13.59□□□□□ -0.23
TRIM46-207ENST00000468878 KLF12Q9Y4X4 402 aa13.59□□□□□ -0.23
TRIM46-207ENST00000468878 IGLV2-11P01706 119 aa13.59□□□□□ -0.23
TRIM46-207ENST00000468878 IGKV3-20P01619 116 aa13.58□□□□□ -0.24
TRIM46-207ENST00000468878 C7orf69Q9H7B7 122 aa13.58□□□□□ -0.24
TRIM46-207ENST00000468878 C19orf71A6NCJ1 209 aa13.58□□□□□ -0.24
TRIM46-207ENST00000468878 K7ERU9 68 aa13.58□□□□□ -0.24
TRIM46-207ENST00000468878 Q6ZQT7 251 aa13.58□□□□□ -0.24
TRIM46-207ENST00000468878 C16orf92Q96LL3 132 aa13.58□□□□□ -0.24
TRIM46-207ENST00000468878 MEGF9Q9H1U4 602 aa13.58□□□□□ -0.24
TRIM46-207ENST00000468878 ZNF80P51504 273 aaPredicted RBP13.57□□□□□ -0.24
TRIM46-207ENST00000468878 LOXL1Q08397 574 aaPredicted RBP13.57□□□□□ -0.24
TRIM46-207ENST00000468878 PRELID3AQ96N28 172 aa13.57□□□□□ -0.24
TRIM46-207ENST00000468878 EGR2P11161 476 aaPredicted RBP13.57□□□□□ -0.24
TRIM46-207ENST00000468878 RNF5Q99942 180 aa13.57□□□□□ -0.24
TRIM46-207ENST00000468878 KLK15Q9H2R5 256 aa13.57□□□□□ -0.24
TRIM46-207ENST00000468878 NPFFO15130 113 aa13.57□□□□□ -0.24
TRIM46-207ENST00000468878 FAM162BQ5T6X4 162 aa13.57□□□□□ -0.24
TRIM46-207ENST00000468878 IL17RELQ6ZVW7 336 aa13.57□□□□□ -0.24
TRIM46-207ENST00000468878 DUX5Q96PT3 197 aa13.57□□□□□ -0.24
TRIM46-207ENST00000468878 PPBPP02775 128 aa13.56□□□□□ -0.24
TRIM46-207ENST00000468878 GATA1P15976 413 aaPredicted RBP13.56□□□□□ -0.24
TRIM46-207ENST00000468878 FBXL19-AS1Q494R0 122 aa13.56□□□□□ -0.24
TRIM46-207ENST00000468878 PRB1P04280 392 aa13.56□□□□□ -0.24
TRIM46-207ENST00000468878 PLP1P60201 277 aa13.56□□□□□ -0.24
TRIM46-207ENST00000468878 C11orf71Q6IPW1 123 aa13.56□□□□□ -0.24
TRIM46-207ENST00000468878 ATP5L2Q7Z4Y8 100 aa13.56□□□□□ -0.24
TRIM46-207ENST00000468878 FER1L6-AS1Q8NA97 138 aa13.56□□□□□ -0.24
TRIM46-207ENST00000468878 H3BUX3 64 aa13.55□□□□□ -0.24
TRIM46-207ENST00000468878 URB1-AS1Q96HZ7 61 aa13.55□□□□□ -0.24
TRIM46-207ENST00000468878 CCL19Q99731 98 aa13.55□□□□□ -0.24
TRIM46-207ENST00000468878 PRSS22Q9GZN4 317 aa13.55□□□□□ -0.24
TRIM46-207ENST00000468878 TMEM191AQ9H0A3 160 aa13.55□□□□□ -0.24
TRIM46-207ENST00000468878 IGHV4-61A0A0C4DH41 118 aa13.55□□□□□ -0.24
TRIM46-207ENST00000468878 TMEM95Q3KNT9 176 aa13.55□□□□□ -0.24
TRIM46-207ENST00000468878 TM4SF20Q53R12 229 aa13.55□□□□□ -0.24
TRIM46-207ENST00000468878 SYS1-DBNDD2H3BUS1 97 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 TAX1BP3O14907 124 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 PRR25Q96S07 402 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 A0A1B0GXF2 115 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 NDUFA3O95167 84 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 TRBV12-3P01733 135 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 IGHV4-38-2P0DP08 117 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 SLC25A34Q6PIV7 304 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 NPBQ8NG41 125 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 AP1S3Q96PC3 154 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 METTL26Q96S19 204 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 CSTL1Q9H114 145 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 TMEM14CQ9P0S9 112 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 GAGE12BA1L429 117 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 TMEM238C9JI98 176 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 SAP30O75446 220 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 IGHV4-39P01824 125 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 S100A4P26447 101 aaKnown RBP13.54□□□□□ -0.24
TRIM46-207ENST00000468878 PSG9Q00887 426 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 ATP5G2Q06055 141 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 CLEC2AQ6UVW9 174 aa13.54□□□□□ -0.24
TRIM46-207ENST00000468878 ODF3BA8MYP8 253 aa13.53□□□□□ -0.24
TRIM46-207ENST00000468878 BLCAPP62952 87 aa13.53□□□□□ -0.24
TRIM46-207ENST00000468878 TMEM78Q5T7P6 136 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms