RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 ST6GAL2Q96JF0 529 aa10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 LINC01587Q99440 93 aa10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 AGPAT4-IT1Q9H0P7 198 aa10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 TMEM167BQ9NRX6 74 aa10.64□□□□□ -0.71
TMEM39A-205ENST00000468676 TRBV7-9A0A0J9YWB2 115 aa10.63□□□□□ -0.71
TMEM39A-205ENST00000468676 H7BYZ3 331 aa10.63□□□□□ -0.71
TMEM39A-205ENST00000468676 HMGB3O15347 200 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-205ENST00000468676 GCHFRP30047 84 aa10.63□□□□□ -0.71
TMEM39A-205ENST00000468676 TAS2R60P59551 318 aa10.63□□□□□ -0.71
TMEM39A-205ENST00000468676 ERCC8Q13216 396 aa10.63□□□□□ -0.71
TMEM39A-205ENST00000468676 SUN5Q8TC36 379 aa10.63□□□□□ -0.71
TMEM39A-205ENST00000468676 IGKV2-40A0A087WW87 121 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-205ENST00000468676 CTXND1A0A1B0GTU2 59 aa10.62□□□□□ -0.71
TMEM39A-205ENST00000468676 PGPA6NDG6 321 aa10.62□□□□□ -0.71
TMEM39A-205ENST00000468676 BCL2L11O43521 198 aa10.62□□□□□ -0.71
TMEM39A-205ENST00000468676 EIF3GO75821 320 aaKnown RBP eCLIP10.62□□□□□ -0.71
TMEM39A-205ENST00000468676 IGKV2D-40P01614 121 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-205ENST00000468676 ZNF138P52744 262 aa10.62□□□□□ -0.71
TMEM39A-205ENST00000468676 GFI1BQ5VTD9 330 aa10.62□□□□□ -0.71
TMEM39A-205ENST00000468676 FAM19A4Q96LR4 140 aa10.62□□□□□ -0.71
TMEM39A-205ENST00000468676 STARD9Q9P2P6 4700 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 ZNF705GA8MUZ8 300 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 DIRC3C9JPN6 131 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 PFDN1O60925 122 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 SEC11BP0C7V7 166 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 CRISP2P16562 243 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 EMP1P54849 157 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 ZNF493Q6ZR52 646 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 TMED6Q8WW62 240 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 HYLS1Q96M11 299 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 VGLL1Q99990 258 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 NIPSNAP3BQ9BS92 247 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 ZNF471Q9BX82 626 aaPredicted RBP10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 ZNF492Q9P255 531 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 LENEPQ9Y5L5 61 aa10.61□□□□□ -0.71
TMEM39A-205ENST00000468676 TRAV10A0A0B4J240 114 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 SERTM2A0A1B0GWG4 89 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 C7orf71A4D174 169 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 KLLNB2CW77 178 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 UMAD1C9J7I0 102 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 GPX1P07203 203 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 TMUB2Q71RG4 321 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 CCDC28AQ8IWP9 274 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 C16orf74Q96GX8 76 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 PYGO2Q9BRQ0 406 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 DKK2Q9UBU2 259 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 CELA1Q9UNI1 258 aa10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 YTHDF2Q9Y5A9 579 aaKnown RBP10.6□□□□□ -0.71
TMEM39A-205ENST00000468676 TRAV12-3A0A0B4J271 114 aa10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 LYRM9A8MSI8 78 aa10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 C1QBP02746 253 aa10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 TCTAP57738 103 aa10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 KIR3DS1Q14943 382 aa10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 ZNF726P1Q15940 193 aa10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 C12orf74Q32Q52 190 aa10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 FAM222AQ5U5X8 452 aa10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 AKAP14Q86UN6 197 aa10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 C5orf17Q8NAS9 161 aa10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 C2CD4CQ8TF44 421 aa10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 KMT2CQ8NEZ4 4911 aaKnown RBP10.59□□□□□ -0.71
TMEM39A-205ENST00000468676 A0A1W2PRE2 83 aa10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 J3KRW8 73 aa10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 K7EQM0 130 aa10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 TPT1P13693 172 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 HTN1P15515 57 aa10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 RNASE4P34096 147 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 DPPA3Q6W0C5 159 aa10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 Q6ZTC4 211 aa10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 SSX7Q7RTT5 188 aa10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 IQCF2Q8IXL9 164 aa10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 STOML3Q8TAV4 291 aa10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 TMEM263Q8WUH6 116 aaKnown RBP10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 NKX6-2Q9C056 277 aaPredicted RBP10.58□□□□□ -0.72
TMEM39A-205ENST00000468676 hCG_2014768A0A024R1R8 64 aa10.57□□□□□ -0.72
TMEM39A-205ENST00000468676 LCE6AA0A183 80 aa10.57□□□□□ -0.72
TMEM39A-205ENST00000468676 ZNF324O75467 553 aaPredicted RBP10.57□□□□□ -0.72
TMEM39A-205ENST00000468676 AZU1P20160 251 aa10.57□□□□□ -0.72
TMEM39A-205ENST00000468676 EIF5AL1Q6IS14 154 aaKnown RBP10.57□□□□□ -0.72
TMEM39A-205ENST00000468676 GOLT1AQ6ZVE7 132 aa10.57□□□□□ -0.72
TMEM39A-205ENST00000468676 ZFAND2AQ8N6M9 145 aa10.57□□□□□ -0.72
TMEM39A-205ENST00000468676 LINC00467Q9BRT7 94 aa10.57□□□□□ -0.72
TMEM39A-205ENST00000468676 RPH3ALQ9UNE2 315 aa10.57□□□□□ -0.72
TMEM39A-205ENST00000468676 TIMM8BQ9Y5J9 83 aaPredicted RBP10.57□□□□□ -0.72
TMEM39A-205ENST00000468676 DEFB131BA0A096LNP1 70 aa10.56□□□□□ -0.72
TMEM39A-205ENST00000468676 MAP1LC3B2A6NCE7 125 aa10.56□□□□□ -0.72
TMEM39A-205ENST00000468676 FBLL1A6NHQ2 334 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-205ENST00000468676 PRM2P04554 102 aa10.56□□□□□ -0.72
TMEM39A-205ENST00000468676 DAD1P61803 113 aa10.56□□□□□ -0.72
TMEM39A-205ENST00000468676 SUMO1P63165 101 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-205ENST00000468676 CD300CQ08708 224 aa10.56□□□□□ -0.72
TMEM39A-205ENST00000468676 BTN1A1Q13410 526 aa10.56□□□□□ -0.72
TMEM39A-205ENST00000468676 RNASE8Q8TDE3 154 aaKnown RBP10.56□□□□□ -0.72
TMEM39A-205ENST00000468676 MAP1LC3BQ9GZQ8 125 aa10.56□□□□□ -0.72
TMEM39A-205ENST00000468676 PLAC8L1A1L4L8 177 aa10.55□□□□□ -0.72
TMEM39A-205ENST00000468676 LGALSLQ3ZCW2 172 aaPredicted RBP10.55□□□□□ -0.72
TMEM39A-205ENST00000468676 Q8TAT8 98 aa10.55□□□□□ -0.72
TMEM39A-205ENST00000468676 EPDR1Q9UM22 224 aa10.55□□□□□ -0.72
TMEM39A-205ENST00000468676 GGTLC3B5MD39 225 aa10.54□□□□□ -0.72
TMEM39A-205ENST00000468676 TCRAP04437 139 aa10.54□□□□□ -0.72
TMEM39A-205ENST00000468676 FGF8P55075 233 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms