RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
COL27A1-203ENST00000468565 CD7P09564 240 aa10.84□□□□□ -0.67
COL27A1-203ENST00000468565 TENM3Q9P273 2699 aa10.84□□□□□ -0.67
COL27A1-203ENST00000468565 LINC00614P0C842 121 aa10.84□□□□□ -0.67
COL27A1-203ENST00000468565 UBE2L3P68036 154 aaKnown RBP10.84□□□□□ -0.67
COL27A1-203ENST00000468565 GAGE1Q13065 139 aa10.84□□□□□ -0.67
COL27A1-203ENST00000468565 LINC00322Q6ZN03 302 aaPredicted RBP10.84□□□□□ -0.67
COL27A1-203ENST00000468565 SLC25A2Q9BXI2 301 aa10.84□□□□□ -0.67
COL27A1-203ENST00000468565 IGKV1D-37A0A075B6S9 117 aa10.83□□□□□ -0.68
COL27A1-203ENST00000468565 HELTA6NFD8 242 aa10.83□□□□□ -0.68
COL27A1-203ENST00000468565 GNG7O60262 68 aa10.83□□□□□ -0.68
COL27A1-203ENST00000468565 RBPMS2Q6ZRY4 209 aaKnown RBP10.83□□□□□ -0.68
COL27A1-203ENST00000468565 HIST3H2BBQ8N257 126 aa10.83□□□□□ -0.68
COL27A1-203ENST00000468565 ZNF414Q96IQ9 312 aa10.83□□□□□ -0.68
COL27A1-203ENST00000468565 TRGV9Q99603 122 aa10.83□□□□□ -0.68
COL27A1-203ENST00000468565 SPATA25Q9BR10 227 aa10.83□□□□□ -0.68
COL27A1-203ENST00000468565 NDUFAF3Q9BU61 184 aa10.83□□□□□ -0.68
COL27A1-203ENST00000468565 SELENOKQ9Y6D0 94 aa10.83□□□□□ -0.68
COL27A1-203ENST00000468565 OR11H12B2RN74 326 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 OR10J4P0C629 311 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 CRYBB3P26998 211 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 GNG4P50150 75 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 ACTL10Q5JWF8 245 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 FAM167A-AS1Q96KT0 104 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 SPAG8Q99932 426 aaPredicted RBP10.82□□□□□ -0.68
COL27A1-203ENST00000468565 TRAV9-1A0A075B6T8 112 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 IFITM10A6NMD0 228 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 IGHV3-48P01763 117 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 RD3LP0DJH9 198 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 ZNF90Q03938 601 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 USF2Q15853 346 aaPredicted RBP10.82□□□□□ -0.68
COL27A1-203ENST00000468565 DEFB125Q8N687 156 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 PAXXQ9BUH6 204 aa10.82□□□□□ -0.68
COL27A1-203ENST00000468565 SUMO1P63165 101 aaKnown RBP10.81□□□□□ -0.68
COL27A1-203ENST00000468565 TIGITQ495A1 244 aa10.81□□□□□ -0.68
COL27A1-203ENST00000468565 CENPWQ5EE01 88 aa10.81□□□□□ -0.68
COL27A1-203ENST00000468565 STXBP6Q8NFX7 210 aa10.81□□□□□ -0.68
COL27A1-203ENST00000468565 MRPL36Q9P0J6 103 aaKnown RBP10.81□□□□□ -0.68
COL27A1-203ENST00000468565 DNAH7Q8WXX0 4024 aa10.81□□□□□ -0.68
COL27A1-203ENST00000468565 TRAV5A0A0B4J249 113 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 GGTLC3B5MD39 225 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 K7EN84 100 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 MORN5Q5VZ52 161 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 PATE2Q6UY27 113 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 TMEM116Q8NCL8 245 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 WFDC10AQ9H1F0 79 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 IL36BQ9NZH7 164 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 IGHV7-4-1A0A0J9YVY3 117 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 GFI1BQ5VTD9 330 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 TMEM183AQ8IXX5 376 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 SMPXQ9UHP9 88 aa10.8□□□□□ -0.68
COL27A1-203ENST00000468565 IGHV3OR16-8A0A075B7F1 116 aa10.79□□□□□ -0.68
COL27A1-203ENST00000468565 RBMY1BA6NDE4 496 aaKnown RBP10.79□□□□□ -0.68
COL27A1-203ENST00000468565 RBMY1EA6NEQ0 496 aaKnown RBP10.79□□□□□ -0.68
COL27A1-203ENST00000468565 C3orf84H3BNL1 204 aa10.79□□□□□ -0.68
COL27A1-203ENST00000468565 ZNF207O43670 478 aaKnown RBP10.79□□□□□ -0.68
COL27A1-203ENST00000468565 RBMY1DP0C7P1 496 aaKnown RBP10.79□□□□□ -0.68
COL27A1-203ENST00000468565 ERVFC1-1P60608 527 aa10.79□□□□□ -0.68
COL27A1-203ENST00000468565 LINC00305Q7Z4B0 112 aa10.79□□□□□ -0.68
COL27A1-203ENST00000468565 OR10D4PQ8NGN7 298 aa10.79□□□□□ -0.68
COL27A1-203ENST00000468565 XKRY2A2RUG3 117 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 SMCPP49901 116 aaPredicted RBP10.78□□□□□ -0.68
COL27A1-203ENST00000468565 PDZD11Q5EBL8 140 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 COA6Q5JTJ3 125 aaKnown RBP10.78□□□□□ -0.68
COL27A1-203ENST00000468565 SAPCD1Q5SSQ6 148 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 OR1B1Q8NGR6 318 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 TRAPPC1Q9Y5R8 145 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 CHEK1O14757 476 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 HYPMO75409 117 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 SCGB2A1O75556 95 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 PYYP10082 97 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 ORM2P19652 201 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 TOMM20LQ6UXN7 152 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 RHPN1-AS1Q9BWJ2 59 aa10.78□□□□□ -0.68
COL27A1-203ENST00000468565 KMT2CQ8NEZ4 4911 aaKnown RBP10.77□□□□□ -0.68
COL27A1-203ENST00000468565 FABP4P15090 132 aa10.77□□□□□ -0.69
COL27A1-203ENST00000468565 BMI1P35226 326 aa10.77□□□□□ -0.69
COL27A1-203ENST00000468565 CNN1P51911 297 aaKnown RBP10.77□□□□□ -0.69
COL27A1-203ENST00000468565 RPL19P84098 196 aaKnown RBP10.77□□□□□ -0.69
COL27A1-203ENST00000468565 MUC7Q8TAX7 377 aa10.77□□□□□ -0.69
COL27A1-203ENST00000468565 FXYD5Q96DB9 178 aa10.77□□□□□ -0.69
COL27A1-203ENST00000468565 FAM110AQ9BQ89 295 aa10.77□□□□□ -0.69
COL27A1-203ENST00000468565 OSTCQ9NRP0 149 aa10.77□□□□□ -0.69
COL27A1-203ENST00000468565 TRAV30A0A087WSZ9 112 aa10.76□□□□□ -0.69
COL27A1-203ENST00000468565 OR4C46A6NHA9 309 aa10.76□□□□□ -0.69
COL27A1-203ENST00000468565 SLC17A3O00476 420 aa10.76□□□□□ -0.69
COL27A1-203ENST00000468565 GCGP01275 180 aa10.76□□□□□ -0.69
COL27A1-203ENST00000468565 PLP1P60201 277 aa10.76□□□□□ -0.69
COL27A1-203ENST00000468565 IGF2BP2-AS1Q96M15 143 aa10.76□□□□□ -0.69
COL27A1-203ENST00000468565 EDA2RQ9HAV5 297 aa10.76□□□□□ -0.69
COL27A1-203ENST00000468565 ISLRO14498 428 aa10.76□□□□□ -0.69
COL27A1-203ENST00000468565 OR5I1Q13606 314 aa10.76□□□□□ -0.69
COL27A1-203ENST00000468565 GOLT1BQ9Y3E0 138 aa10.76□□□□□ -0.69
COL27A1-203ENST00000468565 V9GYV3 84 aa10.76□□□□□ -0.69
COL27A1-203ENST00000468565 LOC102724200A0A096LPH7 203 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-203ENST00000468565 PEX7O00628 323 aa10.75□□□□□ -0.69
COL27A1-203ENST00000468565 YPEL3P61236 119 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-203ENST00000468565 C21orf62-AS1Q17RA5 79 aa10.75□□□□□ -0.69
COL27A1-203ENST00000468565 PACRGQ96M98 296 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-203ENST00000468565 HIST1H2BLQ99880 126 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms