RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 NHLH2Q02577 135 aa16.95■□□□□ 0.3
PTCH1-210ENST00000468211 BTN1A1Q13410 526 aa16.95■□□□□ 0.3
PTCH1-210ENST00000468211 ATP6V1FQ16864 119 aa16.95■□□□□ 0.3
PTCH1-210ENST00000468211 C11orf72Q8NBR9 251 aa16.95■□□□□ 0.3
PTCH1-210ENST00000468211 BLNKQ8WV28 456 aa16.95■□□□□ 0.3
PTCH1-210ENST00000468211 GSN-AS1Q9NRJ2 163 aa16.95■□□□□ 0.3
PTCH1-210ENST00000468211 NDUFA13Q9P0J0 144 aa16.95■□□□□ 0.3
PTCH1-210ENST00000468211 C16orf90A8MZG2 172 aa16.94■□□□□ 0.3
PTCH1-210ENST00000468211 KLLNB2CW77 178 aa16.94■□□□□ 0.3
PTCH1-210ENST00000468211 ZNF324O75467 553 aaPredicted RBP16.94■□□□□ 0.3
PTCH1-210ENST00000468211 SLC25A2Q9BXI2 301 aa16.94■□□□□ 0.3
PTCH1-210ENST00000468211 NPCDR1Q9BY65 106 aa16.94■□□□□ 0.3
PTCH1-210ENST00000468211 TIMM9Q9Y5J7 89 aa16.94■□□□□ 0.3
PTCH1-210ENST00000468211 THAP6Q8TBB0 222 aa16.93■□□□□ 0.3
PTCH1-210ENST00000468211 VSIG2Q96IQ7 327 aa16.93■□□□□ 0.3
PTCH1-210ENST00000468211 FAM167A-AS1Q96KT0 104 aa16.93■□□□□ 0.3
PTCH1-210ENST00000468211 H3BNG1 76 aa16.92■□□□□ 0.3
PTCH1-210ENST00000468211 SIX6O95475 246 aa16.92■□□□□ 0.3
PTCH1-210ENST00000468211 Q6ZQT7 251 aa16.92■□□□□ 0.3
PTCH1-210ENST00000468211 MIR17HGQ75NE6 70 aa16.92■□□□□ 0.3
PTCH1-210ENST00000468211 LINC00477Q96M19 166 aa16.92■□□□□ 0.3
PTCH1-210ENST00000468211 PRELID1Q9Y255 219 aa16.92■□□□□ 0.3
PTCH1-210ENST00000468211 IGKV2-40A0A087WW87 121 aaPredicted RBP16.91■□□□□ 0.3
PTCH1-210ENST00000468211 MPDU1O75352 247 aa16.91■□□□□ 0.3
PTCH1-210ENST00000468211 IGKV2D-40P01614 121 aaPredicted RBP16.91■□□□□ 0.3
PTCH1-210ENST00000468211 RNASE4P34096 147 aaKnown RBP16.91■□□□□ 0.3
PTCH1-210ENST00000468211 PDE6HQ13956 83 aa16.91■□□□□ 0.3
PTCH1-210ENST00000468211 PRR9Q5T870 116 aa16.91■□□□□ 0.3
PTCH1-210ENST00000468211 VGLL1Q99990 258 aa16.91■□□□□ 0.3
PTCH1-210ENST00000468211 UPK3BQ9BT76 320 aa16.91■□□□□ 0.3
PTCH1-210ENST00000468211 ASAH1Q13510 395 aa16.9■□□□□ 0.3
PTCH1-210ENST00000468211 ICAM4Q14773 271 aa16.9■□□□□ 0.3
PTCH1-210ENST00000468211 C9orf47Q6ZRZ4 202 aa16.9■□□□□ 0.3
PTCH1-210ENST00000468211 OR5C1Q8NGR4 320 aa16.9■□□□□ 0.3
PTCH1-210ENST00000468211 LINC00467Q9BRT7 94 aa16.9■□□□□ 0.3
PTCH1-210ENST00000468211 Q9H3A6 140 aa16.9■□□□□ 0.3
PTCH1-210ENST00000468211 OR5AC2Q9NZP5 309 aa16.9■□□□□ 0.3
PTCH1-210ENST00000468211 KLF12Q9Y4X4 402 aa16.9■□□□□ 0.3
PTCH1-210ENST00000468211 CRISP2P16562 243 aa16.89■□□□□ 0.29
PTCH1-210ENST00000468211 MZT2BQ6NZ67 158 aa16.89■□□□□ 0.29
PTCH1-210ENST00000468211 FAM122CQ6P4D5 195 aa16.89■□□□□ 0.29
PTCH1-210ENST00000468211 EIF4E3Q8N5X7 224 aaKnown RBP16.89■□□□□ 0.29
PTCH1-210ENST00000468211 ZFAND2AQ8N6M9 145 aa16.89■□□□□ 0.29
PTCH1-210ENST00000468211 ZNF680Q8NEM1 530 aa16.89■□□□□ 0.29
PTCH1-210ENST00000468211 TP53TG3Q9ULZ0 132 aa16.89■□□□□ 0.29
PTCH1-210ENST00000468211 MRPS16Q9Y3D3 137 aaKnown RBP16.89■□□□□ 0.29
PTCH1-210ENST00000468211 TRGV2A0A075B6R0 118 aa16.88■□□□□ 0.29
PTCH1-210ENST00000468211 A0A096LPF7 62 aa16.88■□□□□ 0.29
PTCH1-210ENST00000468211 TRGV1A0A0A0MS02 117 aa16.88■□□□□ 0.29
PTCH1-210ENST00000468211 H0YIZ8 118 aa16.88■□□□□ 0.29
PTCH1-210ENST00000468211 ANXA2RQ3ZCQ2 193 aa16.88■□□□□ 0.29
PTCH1-210ENST00000468211 C18orf15Q96N68 181 aa16.88■□□□□ 0.29
PTCH1-210ENST00000468211 AAMDCQ9H7C9 122 aa16.88■□□□□ 0.29
PTCH1-210ENST00000468211 FUT9Q9Y231 359 aa16.88■□□□□ 0.29
PTCH1-210ENST00000468211 GPX1P07203 203 aa16.87■□□□□ 0.29
PTCH1-210ENST00000468211 NBEAP1P0C6P0 100 aa16.87■□□□□ 0.29
PTCH1-210ENST00000468211 SPINK4O60575 86 aa16.86■□□□□ 0.29
PTCH1-210ENST00000468211 LRRC37A5PQ49AS3 106 aa16.86■□□□□ 0.29
PTCH1-210ENST00000468211 TTC32Q5I0X7 151 aa16.86■□□□□ 0.29
PTCH1-210ENST00000468211 OR51M1Q9H341 326 aa16.86■□□□□ 0.29
PTCH1-210ENST00000468211 APOBP04114 4563 aaKnown RBP16.86■□□□□ 0.29
PTCH1-210ENST00000468211 CDK2AP2O75956 126 aa16.85■□□□□ 0.29
PTCH1-210ENST00000468211 OR10J4P0C629 311 aa16.85■□□□□ 0.29
PTCH1-210ENST00000468211 TCL1AP56279 114 aa16.85■□□□□ 0.29
PTCH1-210ENST00000468211 SPATA12Q7Z6I5 190 aa16.85■□□□□ 0.29
PTCH1-210ENST00000468211 FXYD5Q96DB9 178 aa16.85■□□□□ 0.29
PTCH1-210ENST00000468211 PHYHIPLQ96FC7 376 aa16.85■□□□□ 0.29
PTCH1-210ENST00000468211 ZNF492Q9P255 531 aa16.85■□□□□ 0.29
PTCH1-210ENST00000468211 E5RGE8 158 aa16.84■□□□□ 0.29
PTCH1-210ENST00000468211 TMEM78Q5T7P6 136 aa16.84■□□□□ 0.29
PTCH1-210ENST00000468211 WDR61Q9GZS3 305 aaKnown RBP16.84■□□□□ 0.29
PTCH1-210ENST00000468211 SLC25A31Q9H0C2 315 aa16.84■□□□□ 0.29
PTCH1-210ENST00000468211 NMBP08949 121 aa16.83■□□□□ 0.28
PTCH1-210ENST00000468211 IFITM3Q01628 133 aa16.83■□□□□ 0.28
PTCH1-210ENST00000468211 LINC00299Q6ZSB3 139 aa16.83■□□□□ 0.28
PTCH1-210ENST00000468211 Q8TAT8 98 aa16.83■□□□□ 0.28
PTCH1-210ENST00000468211 PAXXQ9BUH6 204 aa16.83■□□□□ 0.28
PTCH1-210ENST00000468211 NMES1Q9C002 83 aa16.83■□□□□ 0.28
PTCH1-210ENST00000468211 MRPL16Q9NX20 251 aaKnown RBP16.83■□□□□ 0.28
PTCH1-210ENST00000468211 DNAH5Q8TE73 4624 aa16.83■□□□□ 0.28
PTCH1-210ENST00000468211 A0A1W2PPQ1 181 aa16.82■□□□□ 0.28
PTCH1-210ENST00000468211 RGS13O14921 159 aa16.82■□□□□ 0.28
PTCH1-210ENST00000468211 IGHV3-53P01767 116 aa16.82■□□□□ 0.28
PTCH1-210ENST00000468211 KRTAP10-2P60368 255 aa16.82■□□□□ 0.28
PTCH1-210ENST00000468211 ENKURQ8TC29 256 aa16.82■□□□□ 0.28
PTCH1-210ENST00000468211 S100ZQ8WXG8 99 aa16.82■□□□□ 0.28
PTCH1-210ENST00000468211 IGHV1OR15-1A0A075B7D0 117 aa16.81■□□□□ 0.28
PTCH1-210ENST00000468211 IBA57Q5T440 356 aaKnown RBP16.81■□□□□ 0.28
PTCH1-210ENST00000468211 MRPL32Q9BYC8 188 aaKnown RBP16.81■□□□□ 0.28
PTCH1-210ENST00000468211 UPK1BO75841 260 aa16.8■□□□□ 0.28
PTCH1-210ENST00000468211 ZNF138P52744 262 aa16.8■□□□□ 0.28
PTCH1-210ENST00000468211 ST6GAL2Q96JF0 529 aa16.8■□□□□ 0.28
PTCH1-210ENST00000468211 H2BFSP57053 126 aa16.79■□□□□ 0.28
PTCH1-210ENST00000468211 MAPKAPK5-AS1Q8N8E1 139 aa16.79■□□□□ 0.28
PTCH1-210ENST00000468211 PAX4O43316 350 aa16.78■□□□□ 0.28
PTCH1-210ENST00000468211 LINC00315P59091 139 aa16.78■□□□□ 0.28
PTCH1-210ENST00000468211 INMT-MINDY4F8WBC2 141 aa16.77■□□□□ 0.28
PTCH1-210ENST00000468211 OR7C2O60412 319 aa16.77■□□□□ 0.28
PTCH1-210ENST00000468211 EIF3GO75821 320 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTCH1-210ENST00000468211 RANP62826 216 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms