RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ZNF443Q9Y2A4 671 aaPredicted RBP2.23□□□□□ -2.05
VPS50-209ENST00000467326 LSM2Q9Y333 95 aaKnown RBP2.23□□□□□ -2.05
VPS50-209ENST00000467326 SERP1Q9Y6X1 66 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 TICRRQ7Z2Z1 1910 aa2.23□□□□□ -2.05
VPS50-209ENST00000467326 ABCA10Q8WWZ4 1543 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 LTBP4Q8N2S1 1624 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 IGKV2D-24A0A075B6R9 120 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 C3orf85A0A1B0GTC6 90 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 GNRH2O43555 120 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 OR1I1O60431 355 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 SNCGO76070 127 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 PEBP1P30086 187 aaKnown RBP2.22□□□□□ -2.05
VPS50-209ENST00000467326 SS18Q15532 418 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 ADIRFQ15847 76 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 SPANXN5Q5MJ07 72 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 FAM74A1Q5RGS3 127 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 LINC00471Q8N535 108 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 Q8NDZ9 215 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 C1orf64Q8NEQ6 169 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 CLEC2BQ92478 149 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 TMEM106BQ9NUM4 274 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 RTEL1-TNFRSF6BF6WH68 1400 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 DNMBPQ6XZF7 1577 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 LTBP1Q14766 1721 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 FER1L6Q2WGJ9 1857 aa2.22□□□□□ -2.05
VPS50-209ENST00000467326 CCDC88BA6NC98 1476 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 ADGRL1O94910 1474 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 COL18A1P39060 1754 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 LRP4O75096 1905 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 DENND4CQ5VZ89 1909 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 A0A087WXM4 84 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 C11orf86A6NJI1 115 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 MCRIP1C9JLW8 97 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 M0R233 179 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 M0R2P5 195 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 PSCAO43653 123 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 EDF1O60869 148 aaKnown RBP2.21□□□□□ -2.06
VPS50-209ENST00000467326 PROSCO94903 275 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 CD3DP04234 171 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 IGLC1P0CG04 106 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 CRYGAP11844 174 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 CCL4P13236 92 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 ASIPP42127 132 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 POLR2JP52435 117 aaKnown RBP2.21□□□□□ -2.06
VPS50-209ENST00000467326 Q6AWC8 147 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 Q6ZS92 163 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 NRKQ7Z2Y5 1582 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 NLRC5Q86WI3 1866 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 ANKRD31Q8N7Z5 1873 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 CCL4L1Q8NHW4 92 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 ZNF431Q8TF32 576 aaPredicted RBP2.21□□□□□ -2.06
VPS50-209ENST00000467326 POP5Q969H6 163 aaKnown RBP2.21□□□□□ -2.06
VPS50-209ENST00000467326 LINC00526Q96FQ7 95 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 C14orf132Q9NPU4 83 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 HHLA3Q9XRX5 114 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 SIPA1L1O43166 1804 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 KIAA1671Q9BY89 1806 aa2.21□□□□□ -2.06
VPS50-209ENST00000467326 FANCAO15360 1455 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 THOC2Q8NI27 1593 aaKnown RBP2.2□□□□□ -2.06
VPS50-209ENST00000467326 FOCADQ5VW36 1801 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 IGLV3-9A0A075B6K5 115 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 A0A1B0GU33 70 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 hDV103S1A0JD37 113 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 COLCA2A8K830 154 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 H3BQ15 152 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 SSSCA1O60232 199 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 WISP3O95389 354 aaPredicted RBP2.2□□□□□ -2.06
VPS50-209ENST00000467326 CYB5AP00167 134 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 FAM27BQ5VT28 67 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 ATP11AUNQ6ZP68 121 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 HMGN2P46Q86SG4 172 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 OR2T35Q8NGX2 323 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 ATP6V0E2Q8NHE4 81 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 OTOSQ8NHW6 89 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 C10orf82Q8WW14 230 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 OR8B2Q96RD0 313 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 HIGD2AQ9BW72 106 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 REG4Q9BYZ8 158 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 S4R3C0 116 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 MAST2Q6P0Q8 1798 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 NUP210LQ5VU65 1888 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 FYCO1Q9BQS8 1478 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 CHD1O14646 1710 aa2.2□□□□□ -2.06
VPS50-209ENST00000467326 DOCK4Q8N1I0 1966 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 BRWD3Q6RI45 1802 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 PLXND1Q9Y4D7 1925 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 CUL7Q14999 1698 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 IGKV2-28A0A075B6P5 120 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 IGHV3-64A0A075B6Q5 118 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 IGHV3OR16-8A0A075B7F1 116 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 IGHV1-18A0A0C4DH31 117 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 IGHV1-24A0A0C4DH33 117 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 ZNF705FA8MVS1 300 aaPredicted RBP2.19□□□□□ -2.06
VPS50-209ENST00000467326 C16orf90A8MZG2 172 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 J3QLW9 94 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 ZNF737O75373 536 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 IGKV2D-28P01615 120 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 SHBGP04278 402 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 BAALC-AS2P0C853 105 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 NPC2P61916 151 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms