RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ZNF705DP0CH99 300 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-205ENST00000466897 ZNF705BP0CI00 300 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-205ENST00000466897 RPL35AP18077 110 aaKnown RBP11.14□□□□□ -0.63
NPHP4-205ENST00000466897 GNG5P63218 68 aa11.14□□□□□ -0.63
NPHP4-205ENST00000466897 MEF2BQ02080 365 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-205ENST00000466897 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
NPHP4-205ENST00000466897 GOLT1AQ6ZVE7 132 aa11.14□□□□□ -0.63
NPHP4-205ENST00000466897 TMEM75Q8N9X5 138 aa11.14□□□□□ -0.63
NPHP4-205ENST00000466897 FAM19A4Q96LR4 140 aa11.14□□□□□ -0.63
NPHP4-205ENST00000466897 B9D2Q9BPU9 175 aa11.14□□□□□ -0.63
NPHP4-205ENST00000466897 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
NPHP4-205ENST00000466897 AGPAT4-IT1Q9H0P7 198 aa11.14□□□□□ -0.63
NPHP4-205ENST00000466897 LOC102723971A0A1B0GUV8 181 aa11.13□□□□□ -0.63
NPHP4-205ENST00000466897 RGS13O14921 159 aa11.13□□□□□ -0.63
NPHP4-205ENST00000466897 RAB14P61106 215 aa11.13□□□□□ -0.63
NPHP4-205ENST00000466897 HAGHQ16775 308 aa11.13□□□□□ -0.63
NPHP4-205ENST00000466897 Q6ZWC4 215 aa11.13□□□□□ -0.63
NPHP4-205ENST00000466897 C11orf52Q96A22 123 aa11.13□□□□□ -0.63
NPHP4-205ENST00000466897 VGLL1Q99990 258 aa11.13□□□□□ -0.63
NPHP4-205ENST00000466897 ZNF492Q9P255 531 aa11.13□□□□□ -0.63
NPHP4-205ENST00000466897 PDE6DO43924 150 aa11.12□□□□□ -0.63
NPHP4-205ENST00000466897 GIG44P09565 113 aaPredicted RBP11.12□□□□□ -0.63
NPHP4-205ENST00000466897 CT45A10P0DMU9 189 aa11.12□□□□□ -0.63
NPHP4-205ENST00000466897 CRISP2P16562 243 aa11.12□□□□□ -0.63
NPHP4-205ENST00000466897 TSPOP30536 169 aa11.12□□□□□ -0.63
NPHP4-205ENST00000466897 ZNF138P52744 262 aa11.12□□□□□ -0.63
NPHP4-205ENST00000466897 ERCC8Q13216 396 aa11.12□□□□□ -0.63
NPHP4-205ENST00000466897 ZNF506Q5JVG8 444 aa11.12□□□□□ -0.63
NPHP4-205ENST00000466897 CLLU1Q5K131 121 aa11.12□□□□□ -0.63
NPHP4-205ENST00000466897 FAM210AQ96ND0 272 aa11.12□□□□□ -0.63
NPHP4-205ENST00000466897 RPH3ALQ9UNE2 315 aa11.12□□□□□ -0.63
NPHP4-205ENST00000466897 KLF12Q9Y4X4 402 aa11.12□□□□□ -0.63
NPHP4-205ENST00000466897 TRBV6-1A0A0K0K1D8 114 aa11.11□□□□□ -0.63
NPHP4-205ENST00000466897 RBFOX3A6NFN3 312 aa11.11□□□□□ -0.63
NPHP4-205ENST00000466897 CA1P00915 261 aaPredicted RBP11.11□□□□□ -0.63
NPHP4-205ENST00000466897 IGKV3-20P01619 116 aa11.11□□□□□ -0.63
NPHP4-205ENST00000466897 IGLV2-11P01706 119 aa11.11□□□□□ -0.63
NPHP4-205ENST00000466897 LEPP41159 167 aa11.11□□□□□ -0.63
NPHP4-205ENST00000466897 CDKN1BP46527 198 aa11.11□□□□□ -0.63
NPHP4-205ENST00000466897 C2CD4CQ8TF44 421 aa11.11□□□□□ -0.63
NPHP4-205ENST00000466897 TM2D3Q9BRN9 247 aa11.11□□□□□ -0.63
NPHP4-205ENST00000466897 SLC35B3Q9H1N7 401 aa11.11□□□□□ -0.63
NPHP4-205ENST00000466897 TP53TG1Q9Y2A0 90 aa11.11□□□□□ -0.63
NPHP4-205ENST00000466897 KLLNB2CW77 178 aa11.1□□□□□ -0.63
NPHP4-205ENST00000466897 S100A9P06702 114 aaKnown RBP11.1□□□□□ -0.63
NPHP4-205ENST00000466897 SBSPONQ8IVN8 264 aa11.1□□□□□ -0.63
NPHP4-205ENST00000466897 FMC1Q96HJ9 113 aa11.1□□□□□ -0.63
NPHP4-205ENST00000466897 TRAV8-1A0A0A6YYK1 113 aa11.09□□□□□ -0.63
NPHP4-205ENST00000466897 SCO2A0A1W2PP80 73 aa11.09□□□□□ -0.63
NPHP4-205ENST00000466897 CRXO43186 299 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-205ENST00000466897 PRB4P10163 310 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-205ENST00000466897 FLI1Q01543 452 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-205ENST00000466897 TMEM183BQ1AE95 376 aa11.09□□□□□ -0.63
NPHP4-205ENST00000466897 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
NPHP4-205ENST00000466897 CSNK1G2-AS1Q8NCQ2 148 aa11.09□□□□□ -0.63
NPHP4-205ENST00000466897 PCNPQ8WW12 178 aaKnown RBP11.09□□□□□ -0.63
NPHP4-205ENST00000466897 IGF2BP2-AS1Q96M15 143 aa11.09□□□□□ -0.63
NPHP4-205ENST00000466897 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
NPHP4-205ENST00000466897 SMDT1Q9H4I9 107 aa11.09□□□□□ -0.63
NPHP4-205ENST00000466897 PSG8Q9UQ74 426 aa11.09□□□□□ -0.63
NPHP4-205ENST00000466897 TMEM250H0YL14 139 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 M0R2Z0 102 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 NHLRC4P0CG21 123 aaPredicted RBP11.08□□□□□ -0.64
NPHP4-205ENST00000466897 AKR1C3P42330 323 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 TOR2AQ5JU69 321 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 SAPCD1Q5SSQ6 148 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 Q86TA4 180 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 ZFAND2AQ8N6M9 145 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 Q8TAT8 98 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 RARRES2Q99969 163 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 SPATA25Q9BR10 227 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 NDFIP1Q9BT67 221 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
NPHP4-205ENST00000466897 PRKDCP78527 4128 aaKnown RBP11.07□□□□□ -0.64
NPHP4-205ENST00000466897 INSP01308 110 aa11.07□□□□□ -0.64
NPHP4-205ENST00000466897 COX8CQ7Z4L0 72 aa11.07□□□□□ -0.64
NPHP4-205ENST00000466897 RNF183Q96D59 192 aa11.07□□□□□ -0.64
NPHP4-205ENST00000466897 LINC00479Q96M42 142 aa11.07□□□□□ -0.64
NPHP4-205ENST00000466897 RCHY1Q96PM5 261 aa11.07□□□□□ -0.64
NPHP4-205ENST00000466897 EIF5A2Q9GZV4 153 aaKnown RBP11.07□□□□□ -0.64
NPHP4-205ENST00000466897 ZFP30Q9Y2G7 519 aa11.07□□□□□ -0.64
NPHP4-205ENST00000466897 LTAP01374 205 aa11.06□□□□□ -0.64
NPHP4-205ENST00000466897 FXYD7P58549 80 aa11.06□□□□□ -0.64
NPHP4-205ENST00000466897 TAS2R60P59551 318 aa11.06□□□□□ -0.64
NPHP4-205ENST00000466897 UBE2G1P62253 170 aa11.06□□□□□ -0.64
NPHP4-205ENST00000466897 DEFB135Q30KP9 77 aa11.06□□□□□ -0.64
NPHP4-205ENST00000466897 GFI1BQ5VTD9 330 aa11.06□□□□□ -0.64
NPHP4-205ENST00000466897 ZNF705AQ6ZN79 300 aaPredicted RBP11.06□□□□□ -0.64
NPHP4-205ENST00000466897 TMEM256Q8N2U0 113 aa11.06□□□□□ -0.64
NPHP4-205ENST00000466897 TVP23CQ96ET8 276 aa11.06□□□□□ -0.64
NPHP4-205ENST00000466897 TRAV34A0A0B4J273 112 aa11.05□□□□□ -0.64
NPHP4-205ENST00000466897 C7orf71A4D174 169 aa11.05□□□□□ -0.64
NPHP4-205ENST00000466897 GPX1P07203 203 aa11.05□□□□□ -0.64
NPHP4-205ENST00000466897 PRNTQ86SH4 94 aa11.05□□□□□ -0.64
NPHP4-205ENST00000466897 SMIM12Q96EX1 92 aa11.05□□□□□ -0.64
NPHP4-205ENST00000466897 OVOL2Q9BRP0 275 aa11.05□□□□□ -0.64
NPHP4-205ENST00000466897 ZMAT4Q9H898 229 aa11.05□□□□□ -0.64
NPHP4-205ENST00000466897 TREM1Q9NP99 234 aa11.05□□□□□ -0.64
NPHP4-205ENST00000466897 MED9Q9NWA0 146 aa11.05□□□□□ -0.64
NPHP4-205ENST00000466897 GOLT1BQ9Y3E0 138 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms