RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 TMEM244Q5VVB8 128 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 KRTAP26-1Q6PEX3 210 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 TEN1Q86WV5 123 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 OR5AS1Q8N127 324 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 PATE1Q8WXA2 126 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 PSMF1Q92530 271 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 LINC00052Q96N35 136 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 BANF2Q9H503 90 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 CALML5Q9NZT1 146 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 HELZ2Q9BYK8 2649 aaKnown RBP0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 LAMB4A4D0S4 1761 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 SDK1Q7Z5N4 2213 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 DIDO1Q9BTC0 2240 aaKnown RBP0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 KDM6AO15550 1401 aaPredicted RBP0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 COL4A1P02462 1669 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 USP54Q70EL1 1684 aa0.72□□□□□ -2.29
GTF3C3-209ENST00000466862 CPDO75976 1380 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 RFX7Q2KHR2 1363 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 SYNJ1O43426 1573 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 BICRAQ9NZM4 1560 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 LOC110117498A0A087WWA1 95 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 C3orf85A0A1B0GTC6 90 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 LOC107986453A0A1B0GWG9 222 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 TRBV6-4A0A1B0GX49 114 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 M0R2N4 97 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 UQCRQO14949 82 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 NUPR1O60356 82 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 TRACP01848 142 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 HBDP02042 147 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 SAA1P0DJI8 122 aaPredicted RBP0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 SLC25A4P12235 298 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 COX7CP15954 63 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 BLCAPP62952 87 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 HIST1H1AQ02539 215 aaPredicted RBP0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 MIR22HGQ0VDD5 57 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 MPV17LQ2QL34 196 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 SPRNQ5BIV9 151 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 HAGHLQ6PII5 290 aaPredicted RBP0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 ZCCHC23Q6ZST2 131 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 LINC00269Q8N2A0 174 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 FAM19A2Q8N3H0 131 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 OR8J3Q8NGG0 315 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 OR10AG1Q8NH19 301 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 OR5AK2Q8NH90 309 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 NABP2Q9BQ15 211 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 SMIM3Q9BZL3 60 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 CST11Q9H112 138 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 COPZ2Q9P299 210 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 ZFP30Q9Y2G7 519 aa0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 COL1A1P02452 1464 aaPredicted RBP0.71□□□□□ -2.3
GTF3C3-209ENST00000466862 CEP192Q8TEP8 1941 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 PLXNA4Q9HCM2 1894 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 CECR2Q9BXF3 1484 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 TRBV6-7A0A0A0MS04 114 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 LOC107984156A0A0G2JMH3 177 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 ZNF727A8MUV8 499 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 H3BRM9 83 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 GEMIN2O14893 280 aaKnown RBP0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 INE1O15225 51 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 CCL25O15444 150 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 DNAL4O96015 105 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 MPC1LP0DKB6 136 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 COX4I1P13073 169 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 CCL4P13236 92 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 ZNF25P17030 456 aaPredicted RBP0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 SNRPD3P62318 126 aaKnown RBP0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 DEFB115Q30KQ5 88 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 GLYATL3Q5SZD4 288 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 GDF5OSQ5U4N7 250 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 GLIPR1L1Q6UWM5 242 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 CASC2Q6XLA1 102 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 FOXI2Q6ZQN5 318 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 ARL17AQ8IVW1 177 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 TSTD1Q8NFU3 115 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 C10orf105Q8TEF2 133 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 TCEAL4Q96EI5 215 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 TMEM14CQ9P0S9 112 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 TNFSF18Q9UNG2 199 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 CR1P17927 2039 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 ARHGAP31Q2M1Z3 1444 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 ARFGEF3Q5TH69 2177 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 LAMB2P55268 1798 aa0.7□□□□□ -2.3
GTF3C3-209ENST00000466862 MYOFQ9NZM1 2061 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 SCN3AQ9NY46 2000 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 INTS1Q8N201 2190 aaKnown RBP0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 AHNAK2Q8IVF2 5795 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 NDUFA2O43678 99 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 EDF1O60869 148 aaKnown RBP0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 SMIM24O75264 130 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 CD3DP04234 171 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 CD14P08571 375 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 HIST1H1BP16401 226 aaKnown RBP0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 ETV6P41212 452 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 AKR1D1P51857 326 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 PCBD1P61457 104 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 QRFPP83859 136 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 NEDD8Q15843 81 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 CCDC58Q4VC31 144 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 TMEM91Q6ZNR0 172 aa0.69□□□□□ -2.3
GTF3C3-209ENST00000466862 OR4S1Q8NGB4 309 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms