RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 LGALS9BQ3B8N2 356 aa12.09□□□□□ -0.47
SNED1-208ENST00000466618 CD300EQ496F6 205 aaPredicted RBP12.09□□□□□ -0.47
SNED1-208ENST00000466618 LGALS9CQ6DKI2 356 aa12.09□□□□□ -0.47
SNED1-208ENST00000466618 HCP5Q6MZN7 132 aa12.09□□□□□ -0.47
SNED1-208ENST00000466618 OR8A1Q8NGG7 326 aa12.09□□□□□ -0.47
SNED1-208ENST00000466618 BLNKQ8WV28 456 aa12.09□□□□□ -0.47
SNED1-208ENST00000466618 IGKV1D-37A0A075B6S9 117 aa12.08□□□□□ -0.48
SNED1-208ENST00000466618 J3QLI3 93 aa12.08□□□□□ -0.48
SNED1-208ENST00000466618 CCDC144NLQ6NUI1 221 aa12.08□□□□□ -0.48
SNED1-208ENST00000466618 VMO1Q7Z5L0 202 aa12.08□□□□□ -0.48
SNED1-208ENST00000466618 PCP2Q8IVA1 136 aa12.08□□□□□ -0.48
SNED1-208ENST00000466618 CACNG8Q8WXS5 425 aa12.08□□□□□ -0.48
SNED1-208ENST00000466618 FMC1Q96HJ9 113 aa12.08□□□□□ -0.48
SNED1-208ENST00000466618 AVPP01185 164 aa12.08□□□□□ -0.48
SNED1-208ENST00000466618 FOXI2Q6ZQN5 318 aa12.08□□□□□ -0.48
SNED1-208ENST00000466618 Q71RC1 249 aaPredicted RBP12.08□□□□□ -0.48
SNED1-208ENST00000466618 FA2HQ7L5A8 372 aa12.08□□□□□ -0.48
SNED1-208ENST00000466618 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.08□□□□□ -0.48
SNED1-208ENST00000466618 TMEM133Q9H2Q1 129 aa12.08□□□□□ -0.48
SNED1-208ENST00000466618 IGKV1-16P04430 117 aa12.07□□□□□ -0.48
SNED1-208ENST00000466618 RAB9AP51151 201 aa12.07□□□□□ -0.48
SNED1-208ENST00000466618 LINC00305Q7Z4B0 112 aa12.07□□□□□ -0.48
SNED1-208ENST00000466618 GATD1Q8NB37 220 aa12.07□□□□□ -0.48
SNED1-208ENST00000466618 DAZAP1Q96EP5 407 aaKnown RBP12.07□□□□□ -0.48
SNED1-208ENST00000466618 SPATA25Q9BR10 227 aa12.07□□□□□ -0.48
SNED1-208ENST00000466618 HIVEP1P15822 2718 aa12.07□□□□□ -0.48
SNED1-208ENST00000466618 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.06□□□□□ -0.48
SNED1-208ENST00000466618 TCRBV4S1A1TA0A5B7 111 aa12.06□□□□□ -0.48
SNED1-208ENST00000466618 CACNG7P62955 275 aa12.06□□□□□ -0.48
SNED1-208ENST00000466618 TM4SF20Q53R12 229 aa12.06□□□□□ -0.48
SNED1-208ENST00000466618 OR5AN1Q8NGI8 311 aa12.06□□□□□ -0.48
SNED1-208ENST00000466618 ZNF207O43670 478 aaKnown RBP12.06□□□□□ -0.48
SNED1-208ENST00000466618 SMIM13P0DJ93 91 aa12.06□□□□□ -0.48
SNED1-208ENST00000466618 HOXB4P17483 251 aaPredicted RBP12.06□□□□□ -0.48
SNED1-208ENST00000466618 PRB3Q04118 309 aaPredicted RBP12.06□□□□□ -0.48
SNED1-208ENST00000466618 C8orf31Q8N9H6 132 aa12.06□□□□□ -0.48
SNED1-208ENST00000466618 OR11H6Q8NGC7 330 aa12.06□□□□□ -0.48
SNED1-208ENST00000466618 PRSS3P2Q8NHM4 247 aa12.06□□□□□ -0.48
SNED1-208ENST00000466618 SPANXB1Q9NS25 103 aaPredicted RBP12.06□□□□□ -0.48
SNED1-208ENST00000466618 TCRAP04437 139 aa12.05□□□□□ -0.48
SNED1-208ENST00000466618 ARMS2P0C7Q2 107 aa12.05□□□□□ -0.48
SNED1-208ENST00000466618 IFI27P40305 119 aaPredicted RBP12.05□□□□□ -0.48
SNED1-208ENST00000466618 FXYD2P54710 66 aa12.05□□□□□ -0.48
SNED1-208ENST00000466618 NPIPB3Q92617 1050 aa12.05□□□□□ -0.48
SNED1-208ENST00000466618 VGLL1Q99990 258 aa12.05□□□□□ -0.48
SNED1-208ENST00000466618 F11RQ9Y624 299 aaKnown RBP12.05□□□□□ -0.48
SNED1-208ENST00000466618 ACANP16112 2415 aa12.05□□□□□ -0.48
SNED1-208ENST00000466618 IGLV1-47P01700 117 aa12.05□□□□□ -0.48
SNED1-208ENST00000466618 SAA1P0DJI8 122 aaPredicted RBP12.05□□□□□ -0.48
SNED1-208ENST00000466618 SCGB2A2Q13296 93 aa12.05□□□□□ -0.48
SNED1-208ENST00000466618 PHLDA1Q8WV24 401 aaPredicted RBP12.05□□□□□ -0.48
SNED1-208ENST00000466618 MRPL36Q9P0J6 103 aaKnown RBP12.05□□□□□ -0.48
SNED1-208ENST00000466618 CENPVL3A0A0U1RRI6 287 aa12.04□□□□□ -0.48
SNED1-208ENST00000466618 IGHV3-48P01763 117 aa12.04□□□□□ -0.48
SNED1-208ENST00000466618 KLRD1Q13241 179 aa12.04□□□□□ -0.48
SNED1-208ENST00000466618 SLC25A48Q6ZT89 311 aaKnown RBP12.04□□□□□ -0.48
SNED1-208ENST00000466618 Q86TA4 180 aa12.04□□□□□ -0.48
SNED1-208ENST00000466618 LINC00311Q8N616 119 aa12.04□□□□□ -0.48
SNED1-208ENST00000466618 SMR3AQ99954 134 aa12.04□□□□□ -0.48
SNED1-208ENST00000466618 A0A1B0GUT8 65 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 ZNF785A8K8V0 405 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 ODF3BA8MYP8 253 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 E7EUB6 86 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 FSHBP01225 129 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 NMUP48645 174 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 UBE2E1P51965 193 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 CKS1BP61024 79 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 KLF17Q5JT82 389 aaPredicted RBP12.03□□□□□ -0.48
SNED1-208ENST00000466618 THAP8Q8NA92 274 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 NDUFA4L2Q9NRX3 87 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 TRAV8-1A0A0A6YYK1 113 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 FBLL1A6NHQ2 334 aaKnown RBP12.03□□□□□ -0.48
SNED1-208ENST00000466618 K7ERJ3 54 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 CT45A6P0DMU7 189 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 CT45A5P0DMU8 189 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 CT45A7P0DMV0 189 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 ZNRD1Q9P1U0 126 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 CSPG4Q6UVK1 2322 aa12.03□□□□□ -0.48
SNED1-208ENST00000466618 ABCA1O95477 2261 aa12.02□□□□□ -0.48
SNED1-208ENST00000466618 TRAV26-1A0A087WT03 109 aa12.02□□□□□ -0.48
SNED1-208ENST00000466618 H3BTX0 84 aa12.02□□□□□ -0.48
SNED1-208ENST00000466618 COX7A1P24310 79 aa12.02□□□□□ -0.48
SNED1-208ENST00000466618 WFDC2Q14508 124 aa12.02□□□□□ -0.48
SNED1-208ENST00000466618 Q9H3A6 140 aa12.02□□□□□ -0.48
SNED1-208ENST00000466618 SIGLEC8Q9NYZ4 499 aa12.02□□□□□ -0.48
SNED1-208ENST00000466618 MAST4O15021 2626 aa12.02□□□□□ -0.49
SNED1-208ENST00000466618 LY6G6DO95868 133 aa12.02□□□□□ -0.49
SNED1-208ENST00000466618 GP9P14770 177 aa12.02□□□□□ -0.49
SNED1-208ENST00000466618 GCSHP23434 173 aa12.02□□□□□ -0.49
SNED1-208ENST00000466618 TCTEX1D4Q5JR98 221 aa12.02□□□□□ -0.49
SNED1-208ENST00000466618 STXBP6Q8NFX7 210 aa12.02□□□□□ -0.49
SNED1-208ENST00000466618 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.01□□□□□ -0.49
SNED1-208ENST00000466618 IGLV2-11P01706 119 aa12.01□□□□□ -0.49
SNED1-208ENST00000466618 IGHV4-38-2P0DP08 117 aa12.01□□□□□ -0.49
SNED1-208ENST00000466618 FXYD7P58549 80 aa12.01□□□□□ -0.49
SNED1-208ENST00000466618 RIGQ13278 110 aa12.01□□□□□ -0.49
SNED1-208ENST00000466618 BCL6BQ8N143 479 aaPredicted RBP12.01□□□□□ -0.49
SNED1-208ENST00000466618 SPAG8Q99932 426 aaPredicted RBP12.01□□□□□ -0.49
SNED1-208ENST00000466618 TRAV40A0A0B4J280 105 aa12.01□□□□□ -0.49
SNED1-208ENST00000466618 LOC389332A0A1B0GUA5 103 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms