RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 LINC00299Q6ZSB3 139 aa12.25□□□□□ -0.45
COL7A1-206ENST00000466591 RXFP4Q8TDU9 374 aa12.25□□□□□ -0.45
COL7A1-206ENST00000466591 ARPC5LQ9BPX5 153 aa12.25□□□□□ -0.45
COL7A1-206ENST00000466591 TMPRSS5Q9H3S3 457 aa12.25□□□□□ -0.45
COL7A1-206ENST00000466591 NACAE9PAV3 2078 aa12.24□□□□□ -0.45
COL7A1-206ENST00000466591 OR7C2O60412 319 aa12.24□□□□□ -0.45
COL7A1-206ENST00000466591 BTN1A1Q13410 526 aa12.24□□□□□ -0.45
COL7A1-206ENST00000466591 EIF4E3Q8N5X7 224 aaKnown RBP12.24□□□□□ -0.45
COL7A1-206ENST00000466591 CHAC2Q8WUX2 184 aa12.24□□□□□ -0.45
COL7A1-206ENST00000466591 KRTAP17-1Q9BYP8 105 aa12.24□□□□□ -0.45
COL7A1-206ENST00000466591 OR51M1Q9H341 326 aa12.24□□□□□ -0.45
COL7A1-206ENST00000466591 Q9H8V8 135 aa12.24□□□□□ -0.45
COL7A1-206ENST00000466591 GSN-AS1Q9NRJ2 163 aa12.24□□□□□ -0.45
COL7A1-206ENST00000466591 IGKV2-40A0A087WW87 121 aaPredicted RBP12.23□□□□□ -0.45
COL7A1-206ENST00000466591 C16orf90A8MZG2 172 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 SSNA1O43805 119 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 PRAF2O60831 178 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 IGKV2D-40P01614 121 aaPredicted RBP12.23□□□□□ -0.45
COL7A1-206ENST00000466591 NBEAP1P0C6P0 100 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 PET100P0DJ07 73 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 DAZ2Q13117 558 aaKnown RBP12.23□□□□□ -0.45
COL7A1-206ENST00000466591 Q6ZTI0 123 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 MIR17HGQ75NE6 70 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 ZNF575Q86XF7 245 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 ZNF503Q96F45 646 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 PAXXQ9BUH6 204 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 SLC25A2Q9BXI2 301 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 MRPL32Q9BYC8 188 aaKnown RBP12.23□□□□□ -0.45
COL7A1-206ENST00000466591 NMES1Q9C002 83 aa12.23□□□□□ -0.45
COL7A1-206ENST00000466591 OR10J4P0C629 311 aa12.22□□□□□ -0.45
COL7A1-206ENST00000466591 HOXA5P20719 270 aa12.22□□□□□ -0.45
COL7A1-206ENST00000466591 IL15RAQ13261 267 aa12.22□□□□□ -0.45
COL7A1-206ENST00000466591 SCGB1C1Q8TD33 95 aa12.22□□□□□ -0.45
COL7A1-206ENST00000466591 AGPAT4-IT1Q9H0P7 198 aa12.22□□□□□ -0.45
COL7A1-206ENST00000466591 OR5AC2Q9NZP5 309 aa12.22□□□□□ -0.45
COL7A1-206ENST00000466591 FUT9Q9Y231 359 aa12.22□□□□□ -0.45
COL7A1-206ENST00000466591 DNAH2Q9P225 4427 aa12.22□□□□□ -0.45
COL7A1-206ENST00000466591 HERC2O95714 4834 aa12.22□□□□□ -0.45
COL7A1-206ENST00000466591 INMT-MINDY4F8WBC2 141 aa12.21□□□□□ -0.45
COL7A1-206ENST00000466591 UPK1BO75841 260 aa12.21□□□□□ -0.45
COL7A1-206ENST00000466591 NDUFB4O95168 129 aa12.21□□□□□ -0.45
COL7A1-206ENST00000466591 IFNA5P01569 189 aa12.21□□□□□ -0.45
COL7A1-206ENST00000466591 TNP2Q05952 138 aa12.21□□□□□ -0.45
COL7A1-206ENST00000466591 CD300CQ08708 224 aa12.21□□□□□ -0.45
COL7A1-206ENST00000466591 LINC00612Q8N6U2 182 aa12.21□□□□□ -0.45
COL7A1-206ENST00000466591 WDR61Q9GZS3 305 aaKnown RBP12.21□□□□□ -0.45
COL7A1-206ENST00000466591 KLLNB2CW77 178 aa12.2□□□□□ -0.46
COL7A1-206ENST00000466591 DEFA1P59665 94 aa12.2□□□□□ -0.46
COL7A1-206ENST00000466591 DEFA3P59666 94 aa12.2□□□□□ -0.46
COL7A1-206ENST00000466591 UBE2L3P68036 154 aaKnown RBP12.2□□□□□ -0.46
COL7A1-206ENST00000466591 C9orf47Q6ZRZ4 202 aa12.2□□□□□ -0.46
COL7A1-206ENST00000466591 FAT2Q9NYQ8 4349 aa12.2□□□□□ -0.46
COL7A1-206ENST00000466591 H3BNG1 76 aa12.19□□□□□ -0.46
COL7A1-206ENST00000466591 ZNF138P52744 262 aa12.19□□□□□ -0.46
COL7A1-206ENST00000466591 TAS2R45P59539 299 aa12.19□□□□□ -0.46
COL7A1-206ENST00000466591 RANP62826 216 aaKnown RBP12.19□□□□□ -0.46
COL7A1-206ENST00000466591 ATP5SQ99766 215 aa12.19□□□□□ -0.46
COL7A1-206ENST00000466591 IGHV1OR15-1A0A075B7D0 117 aa12.18□□□□□ -0.46
COL7A1-206ENST00000466591 IGHV3-53P01767 116 aa12.18□□□□□ -0.46
COL7A1-206ENST00000466591 NMBP08949 121 aa12.18□□□□□ -0.46
COL7A1-206ENST00000466591 ZNF415Q09FC8 603 aa12.18□□□□□ -0.46
COL7A1-206ENST00000466591 ANXA2RQ3ZCQ2 193 aa12.18□□□□□ -0.46
COL7A1-206ENST00000466591 FFAR4Q5NUL3 377 aa12.18□□□□□ -0.46
COL7A1-206ENST00000466591 PPP1R1CQ8WVI7 109 aa12.18□□□□□ -0.46
COL7A1-206ENST00000466591 VGLL1Q99990 258 aa12.18□□□□□ -0.46
COL7A1-206ENST00000466591 KLF12Q9Y4X4 402 aa12.18□□□□□ -0.46
COL7A1-206ENST00000466591 PAX4O43316 350 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 CRISP2P16562 243 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 TCL1AP56279 114 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 ESRGQ1W209 222 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 KHDC3LQ587J8 217 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 Q8TAT8 98 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 CMTM2Q8TAZ6 248 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 HYLS1Q96M11 299 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 LINC00467Q9BRT7 94 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 SMIM3Q9BZL3 60 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 MRPL16Q9NX20 251 aaKnown RBP12.17□□□□□ -0.46
COL7A1-206ENST00000466591 ZNF492Q9P255 531 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 RPH3ALQ9UNE2 315 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 MRPS16Q9Y3D3 137 aaKnown RBP12.17□□□□□ -0.46
COL7A1-206ENST00000466591 ICOSQ9Y6W8 199 aa12.17□□□□□ -0.46
COL7A1-206ENST00000466591 KIAA1109Q2LD37 5005 aa12.16□□□□□ -0.46
COL7A1-206ENST00000466591 DNAH17Q9UFH2 4485 aa12.16□□□□□ -0.46
COL7A1-206ENST00000466591 ZNF324O75467 553 aaPredicted RBP12.16□□□□□ -0.46
COL7A1-206ENST00000466591 FAM74A1Q5RGS3 127 aa12.16□□□□□ -0.46
COL7A1-206ENST00000466591 IBA57Q5T440 356 aaKnown RBP12.16□□□□□ -0.46
COL7A1-206ENST00000466591 C11orf72Q8NBR9 251 aa12.16□□□□□ -0.46
COL7A1-206ENST00000466591 FXYD5Q96DB9 178 aa12.16□□□□□ -0.46
COL7A1-206ENST00000466591 PHYHIPLQ96FC7 376 aa12.16□□□□□ -0.46
COL7A1-206ENST00000466591 FAM167A-AS1Q96KT0 104 aa12.16□□□□□ -0.46
COL7A1-206ENST00000466591 Q9H3A6 140 aa12.16□□□□□ -0.46
COL7A1-206ENST00000466591 MUC21Q5SSG8 566 aa12.15□□□□□ -0.46
COL7A1-206ENST00000466591 FAM19A4Q96LR4 140 aa12.15□□□□□ -0.46
COL7A1-206ENST00000466591 UPK3BQ9BT76 320 aa12.15□□□□□ -0.46
COL7A1-206ENST00000466591 NAGKQ9UJ70 344 aa12.15□□□□□ -0.46
COL7A1-206ENST00000466591 HSPB11Q9Y547 144 aa12.15□□□□□ -0.46
COL7A1-206ENST00000466591 TRGV4A0A0C4DH28 118 aa12.14□□□□□ -0.47
COL7A1-206ENST00000466591 A0A1W2PPQ1 181 aa12.14□□□□□ -0.47
COL7A1-206ENST00000466591 A0A1W2PPV4 95 aa12.14□□□□□ -0.47
COL7A1-206ENST00000466591 H0YIZ8 118 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms