RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 PTPRFP10586 1907 aa0.4□□□□□ -2.35
CCDC93-205ENST00000466171 AHNAKQ09666 5890 aaKnown RBP0.4□□□□□ -2.35
CCDC93-205ENST00000466171 TRAV13-1A0A0B4J241 112 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 TRBV30A0A0K0K1B3 111 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 ZNF727A8MUV8 499 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 M0QZK8 103 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 SNRNP200O75643 2136 aaKnown RBP0.39□□□□□ -2.35
CCDC93-205ENST00000466171 FAM107AO95990 144 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 RPL7P18124 248 aaKnown RBP0.39□□□□□ -2.35
CCDC93-205ENST00000466171 S100GP29377 79 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 SAMD13Q5VXD3 122 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 Q6ZQY7 126 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 CCL4L1Q8NHW4 92 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 THEM6Q8WUY1 208 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 LXNQ9BS40 222 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 LPAR5Q9H1C0 372 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 MED31Q9Y3C7 131 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 UNC13CQ8NB66 2214 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 TCOF1Q13428 1488 aaKnown RBP0.39□□□□□ -2.35
CCDC93-205ENST00000466171 ANKRD31Q8N7Z5 1873 aa0.39□□□□□ -2.35
CCDC93-205ENST00000466171 BCL9O00512 1426 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 CNTRLQ7Z7A1 2325 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 TRBV27A0A0K0K1C4 114 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 LOC107984640A0A0U1RRK4 108 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 LOC107986453A0A1B0GWG9 222 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 BBIP1A8MTZ0 92 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 H3BMG7 143 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 SULT1C4O75897 302 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 IGHV3-33P01772 117 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 SAA1P0DJI8 122 aaPredicted RBP0.38□□□□□ -2.35
CCDC93-205ENST00000466171 CRYGSP22914 178 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 SPINT3P49223 89 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 POLR2HP52434 150 aaKnown RBP0.38□□□□□ -2.35
CCDC93-205ENST00000466171 C3orf62Q6ZUJ4 267 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 C5orf17Q8NAS9 161 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 OR51A4Q8NGJ6 313 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 BRK1Q8WUW1 75 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 CIB3Q96Q77 187 aaPredicted RBP0.38□□□□□ -2.35
CCDC93-205ENST00000466171 CCL19Q99731 98 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 CENPHQ9H3R5 247 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 SMPXQ9UHP9 88 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 CHD3Q12873 2000 aaKnown RBP0.38□□□□□ -2.35
CCDC93-205ENST00000466171 ZCCHC11Q5TAX3 1644 aaKnown RBP0.38□□□□□ -2.35
CCDC93-205ENST00000466171 FGD6Q6ZV73 1430 aa0.38□□□□□ -2.35
CCDC93-205ENST00000466171 NUP210Q8TEM1 1887 aaPredicted RBP0.37□□□□□ -2.35
CCDC93-205ENST00000466171 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.37□□□□□ -2.35
CCDC93-205ENST00000466171 ARL5CA6NH57 179 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 H0YJX3 145 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 EDF1O60869 148 aaKnown RBP0.37□□□□□ -2.35
CCDC93-205ENST00000466171 KDELR1P24390 212 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 SNRPD3P62318 126 aaKnown RBP0.37□□□□□ -2.35
CCDC93-205ENST00000466171 TFAMQ00059 246 aaKnown RBP0.37□□□□□ -2.35
CCDC93-205ENST00000466171 TMEM128Q5BJH2 165 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 C6orf52Q5T4I8 152 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.37□□□□□ -2.35
CCDC93-205ENST00000466171 TMEM35BQ8NCS4 154 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 MORN4Q8NDC4 146 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 CCDC115Q96NT0 180 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 NABP2Q9BQ15 211 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 MRPL40Q9NQ50 206 aaKnown RBP0.37□□□□□ -2.35
CCDC93-205ENST00000466171 CBLN4Q9NTU7 201 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 FAM135BQ49AJ0 1406 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 TET1Q8NFU7 2136 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 DSPPQ9NZW4 1301 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 USP54Q70EL1 1684 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 CITO14578 2027 aa0.37□□□□□ -2.35
CCDC93-205ENST00000466171 A2MP01023 1474 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 MYO18AQ92614 2054 aaKnown RBP0.36□□□□□ -2.35
CCDC93-205ENST00000466171 FBN2P35556 2912 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 TRBV7-6A0A0J9YX20 115 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 A0A0J9YY99 117 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 TSTD3H0UI37 97 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 CDC42EP2O14613 210 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 FREM3P0C091 2139 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 SLC25A4P12235 298 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 IL7P13232 177 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 PDE6GP18545 87 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 RPS3P23396 243 aaKnown RBP eCLIP0.36□□□□□ -2.35
CCDC93-205ENST00000466171 SRP9P49458 86 aaKnown RBP0.36□□□□□ -2.35
CCDC93-205ENST00000466171 GTF2A1P52655 376 aaPredicted RBP0.36□□□□□ -2.35
CCDC93-205ENST00000466171 FOXA3P55318 350 aaPredicted RBP0.36□□□□□ -2.35
CCDC93-205ENST00000466171 BLCAPP62952 87 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 QRFPP83859 136 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 SPINK9Q5DT21 86 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 CSAG1Q6PB30 78 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 SPATA8Q6RVD6 105 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 TCTEX1D1Q8N7M0 179 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 TMEM229BQ8NBD8 167 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 OR8J3Q8NGG0 315 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 OR9Q1Q8NGQ5 310 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 SKA2Q8WVK7 121 aaPredicted RBP0.36□□□□□ -2.35
CCDC93-205ENST00000466171 NDUFAF1Q9Y375 327 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 FANCMQ8IYD8 2048 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 PTPRDP23468 1912 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 NOTCH1P46531 2555 aa0.36□□□□□ -2.35
CCDC93-205ENST00000466171 A0A1W2PPB8 328 aa0.35□□□□□ -2.35
CCDC93-205ENST00000466171 GNG14A0A1W2PPG7 69 aa0.35□□□□□ -2.35
CCDC93-205ENST00000466171 A0A1W2PRS3 328 aa0.35□□□□□ -2.35
CCDC93-205ENST00000466171 PRORSD1PA6NEY8 169 aa0.35□□□□□ -2.35
CCDC93-205ENST00000466171 KIR3DP1A8MWS1 328 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms