RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ERCC8Q13216 396 aa8.2□□□□□ -1.1
VCP-204ENST00000466100 EBLN2Q6P2I7 272 aa8.2□□□□□ -1.1
VCP-204ENST00000466100 LINC00322Q6ZN03 302 aaPredicted RBP8.2□□□□□ -1.1
VCP-204ENST00000466100 FAM19A4Q96LR4 140 aa8.2□□□□□ -1.1
VCP-204ENST00000466100 AGPAT4-IT1Q9H0P7 198 aa8.2□□□□□ -1.1
VCP-204ENST00000466100 RPH3ALQ9UNE2 315 aa8.2□□□□□ -1.1
VCP-204ENST00000466100 KLF12Q9Y4X4 402 aa8.2□□□□□ -1.1
VCP-204ENST00000466100 TRAV8-1A0A0A6YYK1 113 aa8.19□□□□□ -1.1
VCP-204ENST00000466100 C9JQL5 133 aa8.19□□□□□ -1.1
VCP-204ENST00000466100 PDE6DO43924 150 aa8.19□□□□□ -1.1
VCP-204ENST00000466100 CT45A10P0DMU9 189 aa8.19□□□□□ -1.1
VCP-204ENST00000466100 SRSF3P84103 164 aaKnown RBP8.19□□□□□ -1.1
VCP-204ENST00000466100 TMEM75Q8N9X5 138 aa8.19□□□□□ -1.1
VCP-204ENST00000466100 OR10J6PQ8NGY7 276 aa8.19□□□□□ -1.1
VCP-204ENST00000466100 LINC00479Q96M42 142 aa8.19□□□□□ -1.1
VCP-204ENST00000466100 ODF3Q96PU9 254 aa8.19□□□□□ -1.1
VCP-204ENST00000466100 PPP1R14DQ9NXH3 145 aa8.19□□□□□ -1.1
VCP-204ENST00000466100 TRBV6-1A0A0K0K1D8 114 aa8.18□□□□□ -1.1
VCP-204ENST00000466100 RAB19A4D1S5 217 aa8.18□□□□□ -1.1
VCP-204ENST00000466100 LINC00862A6NCI5 91 aa8.18□□□□□ -1.1
VCP-204ENST00000466100 F6UZH7 168 aa8.18□□□□□ -1.1
VCP-204ENST00000466100 TMEM250H0YL14 139 aa8.18□□□□□ -1.1
VCP-204ENST00000466100 SRP19P09132 144 aaKnown RBP8.18□□□□□ -1.1
VCP-204ENST00000466100 GIG44P09565 113 aaPredicted RBP8.18□□□□□ -1.1
VCP-204ENST00000466100 STHQ8IWL8 128 aa8.18□□□□□ -1.1
VCP-204ENST00000466100 Q8TAT8 98 aa8.18□□□□□ -1.1
VCP-204ENST00000466100 TVP23CQ96ET8 276 aa8.18□□□□□ -1.1
VCP-204ENST00000466100 LINC00477Q96M19 166 aa8.18□□□□□ -1.1
VCP-204ENST00000466100 EIF5A2Q9GZV4 153 aaKnown RBP8.18□□□□□ -1.1
VCP-204ENST00000466100 TRAV34A0A0B4J273 112 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 TRBV7-9A0A0J9YWB2 115 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 IGKV3-20P01619 116 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 CRISP2P16562 243 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 RPL35AP18077 110 aaKnown RBP8.17□□□□□ -1.1
VCP-204ENST00000466100 AKR1C3P42330 323 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 ZNF138P52744 262 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 TMEM183BQ1AE95 376 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 TMEM78Q5T7P6 136 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 Q86TA4 180 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 OR4B1Q8NGF8 309 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 SGK494Q96LW2 274 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 SLC35B3Q9H1N7 401 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 SMDT1Q9H4I9 107 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 ZNF492Q9P255 531 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 PSG8Q9UQ74 426 aa8.17□□□□□ -1.1
VCP-204ENST00000466100 STAB2Q8WWQ8 2551 aa8.16□□□□□ -1.1
VCP-204ENST00000466100 LOC102724200A0A096LPH7 203 aaPredicted RBP8.16□□□□□ -1.1
VCP-204ENST00000466100 FBLL1A6NHQ2 334 aaKnown RBP8.16□□□□□ -1.1
VCP-204ENST00000466100 K7EQM0 130 aa8.16□□□□□ -1.1
VCP-204ENST00000466100 FRMD6-AS1P0C7T7 363 aa8.16□□□□□ -1.1
VCP-204ENST00000466100 FLI1Q01543 452 aaPredicted RBP8.16□□□□□ -1.1
VCP-204ENST00000466100 EIF4E3Q8N5X7 224 aaKnown RBP8.16□□□□□ -1.1
VCP-204ENST00000466100 ZFAND2AQ8N6M9 145 aa8.16□□□□□ -1.1
VCP-204ENST00000466100 FMC1Q96HJ9 113 aa8.16□□□□□ -1.1
VCP-204ENST00000466100 IGF2BP2-AS1Q96M15 143 aa8.16□□□□□ -1.1
VCP-204ENST00000466100 ASCL2Q99929 193 aa8.16□□□□□ -1.1
VCP-204ENST00000466100 TUBA4BQ9H853 241 aa8.16□□□□□ -1.1
VCP-204ENST00000466100 LENEPQ9Y5L5 61 aa8.16□□□□□ -1.1
VCP-204ENST00000466100 TGP01266 2768 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 TRBV20OR9-2A0A075B6H5 130 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 KIR2DL5BA0A0G2JN68 375 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 KIR2DL5BA0A0G2JPC4 375 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 KLLNB2CW77 178 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 M0R2Z0 102 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 CRXO43186 299 aaPredicted RBP8.15□□□□□ -1.1
VCP-204ENST00000466100 LTAP01374 205 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 S100A9P06702 114 aaKnown RBP8.15□□□□□ -1.1
VCP-204ENST00000466100 RPL35P42766 123 aaKnown RBP8.15□□□□□ -1.1
VCP-204ENST00000466100 KIR3DS1Q14943 382 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 PEA15Q15121 130 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 SPINK13Q1W4C9 94 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 PRR9Q5T870 116 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 MORN3Q6PF18 240 aaPredicted RBP8.15□□□□□ -1.1
VCP-204ENST00000466100 COX8CQ7Z4L0 72 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 COMMD7Q86VX2 200 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 KIR2DL5AQ8N109 375 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 KIR2DL5BQ8NHK3 375 aa8.15□□□□□ -1.1
VCP-204ENST00000466100 FXYD7P58549 80 aa8.14□□□□□ -1.11
VCP-204ENST00000466100 TAS2R60P59551 318 aa8.14□□□□□ -1.11
VCP-204ENST00000466100 UBE2G1P62253 170 aa8.14□□□□□ -1.11
VCP-204ENST00000466100 PRNTQ86SH4 94 aa8.14□□□□□ -1.11
VCP-204ENST00000466100 CSNK1G2-AS1Q8NCQ2 148 aa8.14□□□□□ -1.11
VCP-204ENST00000466100 MLST8Q9BVC4 326 aa8.14□□□□□ -1.11
VCP-204ENST00000466100 CSTL1Q9H114 145 aa8.14□□□□□ -1.11
VCP-204ENST00000466100 PARLQ9H300 379 aa8.14□□□□□ -1.11
VCP-204ENST00000466100 IGLV2-8P01709 118 aa8.13□□□□□ -1.11
VCP-204ENST00000466100 AMBPP02760 352 aa8.13□□□□□ -1.11
VCP-204ENST00000466100 RBMY1A1P0DJD3 496 aaKnown RBP8.13□□□□□ -1.11
VCP-204ENST00000466100 RBMY1CP0DJD4 496 aa8.13□□□□□ -1.11
VCP-204ENST00000466100 LEPP41159 167 aa8.13□□□□□ -1.11
VCP-204ENST00000466100 CDKN1BP46527 198 aa8.13□□□□□ -1.11
VCP-204ENST00000466100 APOC4P55056 127 aa8.13□□□□□ -1.11
VCP-204ENST00000466100 DEFA6Q01524 100 aa8.13□□□□□ -1.11
VCP-204ENST00000466100 RBMY1FQ15415 496 aaKnown RBP8.13□□□□□ -1.11
VCP-204ENST00000466100 CENPWQ5EE01 88 aa8.13□□□□□ -1.11
VCP-204ENST00000466100 GFI1BQ5VTD9 330 aa8.13□□□□□ -1.11
VCP-204ENST00000466100 UQCC3Q6UW78 93 aa8.13□□□□□ -1.11
VCP-204ENST00000466100 C8orf49Q96NF6 230 aa8.13□□□□□ -1.11
VCP-204ENST00000466100 TRAV12-2A0A075B6T6 113 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms