RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 MTORP42345 2549 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 TRBV7-9A0A0J9YWB2 115 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 A0A1B0GV50 99 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 B4DEV8 164 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 K7EQM0 130 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 PEX7O00628 323 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 ISLRO14498 428 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 TSPAN4O14817 238 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 TCRAP04437 139 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 SFTA3P0C7M3 94 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 ADCYAP1P18509 176 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 ID1P41134 155 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 CSN1S1P47710 185 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 INSL3P51460 131 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 UBE2G2P60604 165 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 PAFAH1B2P68402 229 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 PSG3Q16557 428 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 TMEM241Q24JQ0 296 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 KRTAP24-1Q3LI83 254 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 TCF24Q7RTU0 167 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 IQCF2Q8IXL9 164 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 SVBPQ8N300 66 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 FAM110AQ9BQ89 295 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 PARLQ9H300 379 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 SDF2L1Q9HCN8 221 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 NRN1Q9NPD7 142 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 ZFP30Q9Y2G7 519 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 LENEPQ9Y5L5 61 aa4.11□□□□□ -1.75
VPS41-211ENST00000466017 IGHV3OR16-8A0A075B7F1 116 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 TRAV8-2A0A0B4J237 113 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 ZNF727A8MUV8 499 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 K7EQG2 157 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 ZNF207O43670 478 aaKnown RBP4.1□□□□□ -1.75
VPS41-211ENST00000466017 SNAPINO95295 136 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 CNN1P51911 297 aaKnown RBP4.1□□□□□ -1.75
VPS41-211ENST00000466017 KRTAP10-11P60412 298 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 LCN12Q6JVE5 192 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 C9orf47Q6ZRZ4 202 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 CYB561D1Q8N8Q1 229 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 TMEM75Q8N9X5 138 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 CMTM2Q8TAZ6 248 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 DCANP1Q8TF63 244 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 BLNKQ8WV28 456 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 DAZAP1Q96EP5 407 aaKnown RBP4.1□□□□□ -1.75
VPS41-211ENST00000466017 TVP23CQ96ET8 276 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 FMC1Q96HJ9 113 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 LINC00477Q96M19 166 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 LINC00052Q96N35 136 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 SPAG8Q99932 426 aaPredicted RBP4.1□□□□□ -1.75
VPS41-211ENST00000466017 MCRIP2Q9BUT9 160 aaKnown RBP4.1□□□□□ -1.75
VPS41-211ENST00000466017 BIN3Q9NQY0 253 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 TMEM242Q9NWH2 141 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 NAT8Q9UHE5 227 aa4.1□□□□□ -1.75
VPS41-211ENST00000466017 C2CD3Q4AC94 2353 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 IGHV3-66A0A0C4DH42 116 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 A8MTW9 85 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 SLC17A3O00476 420 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 GCGP01275 180 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 IGLV1-51P01701 117 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 IGLV2-11P01706 119 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 IGLV2-8P01709 118 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 AKR1C3P42330 323 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 RPL35P42766 123 aaKnown RBP4.09□□□□□ -1.75
VPS41-211ENST00000466017 DEFB136Q30KP8 78 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 SAPCD1Q5SSQ6 148 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 TMEM183AQ8IXX5 376 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 EXOC3-AS1Q8N2X6 119 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 SMIM7Q9BQ49 75 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 NIPSNAP3BQ9BS92 247 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 CTDSP1Q9GZU7 261 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 MS4A6AQ9H2W1 248 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 TUBA4BQ9H853 241 aa4.09□□□□□ -1.75
VPS41-211ENST00000466017 NSD1Q96L73 2696 aaPredicted RBP4.08□□□□□ -1.76
VPS41-211ENST00000466017 TRBV20OR9-2A0A075B6H5 130 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 IGHV3OR16-13A0A075B7E8 117 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 A0A087WWC5 75 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 IGHV3-49A0A0A0MS15 119 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 IGHV3-74A0A0B4J1X5 117 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 CXorf65A6NEN9 183 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 M0R3E3 92 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 PPP1R2P9O14990 202 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 LTAP01374 205 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 APOC3P02656 99 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 EDN2P20800 178 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 SNRPD3P62318 126 aaKnown RBP4.08□□□□□ -1.76
VPS41-211ENST00000466017 RPL23P62829 140 aaKnown RBP4.08□□□□□ -1.76
VPS41-211ENST00000466017 FLI1Q01543 452 aaPredicted RBP4.08□□□□□ -1.76
VPS41-211ENST00000466017 RHEBQ15382 184 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 NSUN5P1Q3KNT7 163 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 C9orf66Q5T8R8 295 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 C12orf54Q6X4T0 127 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 RBPMS2Q6ZRY4 209 aaKnown RBP4.08□□□□□ -1.76
VPS41-211ENST00000466017 FAM231DQ6ZW35 169 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 LINC01551Q86U37 167 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 BAGE2Q86Y30 109 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 APRG1Q8IVJ8 170 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 OCC1Q8TAD7 63 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 DYNLRB2Q8TF09 96 aa4.08□□□□□ -1.76
VPS41-211ENST00000466017 IGF2BP2-AS1Q96M15 143 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms