RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 TMPRSS5Q9H3S3 457 aa13.33□□□□□ -0.28
HOXA9-203ENST00000465941 GOLT1BQ9Y3E0 138 aa13.33□□□□□ -0.28
HOXA9-203ENST00000465941 TMEM78Q5T7P6 136 aa13.32□□□□□ -0.28
HOXA9-203ENST00000465941 SFT2D1Q8WV19 159 aa13.32□□□□□ -0.28
HOXA9-203ENST00000465941 FAM19A4Q96LR4 140 aa13.32□□□□□ -0.28
HOXA9-203ENST00000465941 TRAV12-2A0A075B6T6 113 aa13.31□□□□□ -0.28
HOXA9-203ENST00000465941 A0A0J9YWU9 116 aa13.31□□□□□ -0.28
HOXA9-203ENST00000465941 SMIM9A6NGZ8 99 aa13.31□□□□□ -0.28
HOXA9-203ENST00000465941 INSP01308 110 aa13.31□□□□□ -0.28
HOXA9-203ENST00000465941 LEPP41159 167 aa13.31□□□□□ -0.28
HOXA9-203ENST00000465941 SULT1A2P50226 295 aa13.31□□□□□ -0.28
HOXA9-203ENST00000465941 SUMO1P63165 101 aaKnown RBP13.31□□□□□ -0.28
HOXA9-203ENST00000465941 Q8NAQ8 132 aa13.31□□□□□ -0.28
HOXA9-203ENST00000465941 C5orf17Q8NAS9 161 aa13.31□□□□□ -0.28
HOXA9-203ENST00000465941 NKX6-2Q9C056 277 aaPredicted RBP13.31□□□□□ -0.28
HOXA9-203ENST00000465941 ZNF492Q9P255 531 aa13.31□□□□□ -0.28
HOXA9-203ENST00000465941 GGTLC3B5MD39 225 aa13.3□□□□□ -0.28
HOXA9-203ENST00000465941 NMBP08949 121 aa13.3□□□□□ -0.28
HOXA9-203ENST00000465941 H2AFB1P0C5Y9 115 aa13.3□□□□□ -0.28
HOXA9-203ENST00000465941 ZNF138P52744 262 aa13.3□□□□□ -0.28
HOXA9-203ENST00000465941 C11orf68Q9H3H3 251 aaKnown RBP13.3□□□□□ -0.28
HOXA9-203ENST00000465941 IGHV3OR16-12A0A075B7B8 117 aa13.29□□□□□ -0.28
HOXA9-203ENST00000465941 TRBV7-9A0A0J9YWB2 115 aa13.29□□□□□ -0.28
HOXA9-203ENST00000465941 FAM74A7A6NL05 159 aa13.29□□□□□ -0.28
HOXA9-203ENST00000465941 CRISP2P16562 243 aa13.29□□□□□ -0.28
HOXA9-203ENST00000465941 TMEM256Q8N2U0 113 aa13.29□□□□□ -0.28
HOXA9-203ENST00000465941 C20orf144Q9BQM9 153 aa13.29□□□□□ -0.28
HOXA9-203ENST00000465941 EPDR1Q9UM22 224 aa13.29□□□□□ -0.28
HOXA9-203ENST00000465941 YTHDF2Q9Y5A9 579 aaKnown RBP13.29□□□□□ -0.28
HOXA9-203ENST00000465941 TRAV1-1A0A0B4J248 108 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 IGHV4-28A0A0C4DH34 117 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 SERTM2A0A1B0GWG4 89 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 KLLNB2CW77 178 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 TCRAP04437 139 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 RBMY1A1P0DJD3 496 aaKnown RBP13.28□□□□□ -0.28
HOXA9-203ENST00000465941 RBMY1CP0DJD4 496 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 UBE2G2P60604 165 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 KIR3DS1Q14943 382 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 RBMY1FQ15415 496 aaKnown RBP13.28□□□□□ -0.28
HOXA9-203ENST00000465941 GFI1BQ5VTD9 330 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 GOLT1AQ6ZVE7 132 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 TMEM208Q9BTX3 173 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 BOLA1Q9Y3E2 137 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 LENEPQ9Y5L5 61 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 ARL2-SNX15V9GYD0 113 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 STAB2Q8WWQ8 2551 aa13.28□□□□□ -0.28
HOXA9-203ENST00000465941 GNG5P63218 68 aa13.27□□□□□ -0.29
HOXA9-203ENST00000465941 RPH3ALQ9UNE2 315 aa13.27□□□□□ -0.29
HOXA9-203ENST00000465941 DEFB4AO15263 64 aa13.26□□□□□ -0.29
HOXA9-203ENST00000465941 HBE1P02100 147 aa13.26□□□□□ -0.29
HOXA9-203ENST00000465941 ZFAND2AQ8N6M9 145 aa13.26□□□□□ -0.29
HOXA9-203ENST00000465941 Q8TAT8 98 aa13.26□□□□□ -0.29
HOXA9-203ENST00000465941 MUC7Q8TAX7 377 aa13.26□□□□□ -0.29
HOXA9-203ENST00000465941 LINC01587Q99440 93 aa13.26□□□□□ -0.29
HOXA9-203ENST00000465941 H7BYZ3 331 aa13.25□□□□□ -0.29
HOXA9-203ENST00000465941 J3KRW8 73 aa13.25□□□□□ -0.29
HOXA9-203ENST00000465941 K7EQM0 130 aa13.25□□□□□ -0.29
HOXA9-203ENST00000465941 IFNA7P01567 189 aa13.25□□□□□ -0.29
HOXA9-203ENST00000465941 GPX1P07203 203 aa13.25□□□□□ -0.29
HOXA9-203ENST00000465941 CCDC28AQ8IWP9 274 aa13.25□□□□□ -0.29
HOXA9-203ENST00000465941 IL17DQ8TAD2 202 aa13.25□□□□□ -0.29
HOXA9-203ENST00000465941 ATG101Q9BSB4 218 aa13.25□□□□□ -0.29
HOXA9-203ENST00000465941 TRAV12-3A0A0B4J271 114 aa13.24□□□□□ -0.29
HOXA9-203ENST00000465941 A0A1B0GV50 99 aa13.24□□□□□ -0.29
HOXA9-203ENST00000465941 C7orf71A4D174 169 aa13.24□□□□□ -0.29
HOXA9-203ENST00000465941 TMEM189A5PLL7 270 aa13.24□□□□□ -0.29
HOXA9-203ENST00000465941 TEX46H3BTG2 121 aa13.24□□□□□ -0.29
HOXA9-203ENST00000465941 PPT1P50897 306 aa13.24□□□□□ -0.29
HOXA9-203ENST00000465941 TAS2R60P59551 318 aa13.24□□□□□ -0.29
HOXA9-203ENST00000465941 RRN3P1Q2M238 152 aa13.24□□□□□ -0.29
HOXA9-203ENST00000465941 CYB561D1Q8N8Q1 229 aa13.24□□□□□ -0.29
HOXA9-203ENST00000465941 TCEAL7Q9BRU2 100 aa13.24□□□□□ -0.29
HOXA9-203ENST00000465941 TRAV8-1A0A0A6YYK1 113 aa13.23□□□□□ -0.29
HOXA9-203ENST00000465941 FBLL1A6NHQ2 334 aaKnown RBP13.23□□□□□ -0.29
HOXA9-203ENST00000465941 PAGE4O60829 102 aa13.23□□□□□ -0.29
HOXA9-203ENST00000465941 ZNF324O75467 553 aaPredicted RBP13.23□□□□□ -0.29
HOXA9-203ENST00000465941 RNASE4P34096 147 aaKnown RBP13.23□□□□□ -0.29
HOXA9-203ENST00000465941 CCL20P78556 96 aa13.23□□□□□ -0.29
HOXA9-203ENST00000465941 CST9LP1Q5W188 147 aa13.23□□□□□ -0.29
HOXA9-203ENST00000465941 ALKAL2Q6UX46 152 aa13.23□□□□□ -0.29
HOXA9-203ENST00000465941 HIST1H2BAQ96A08 127 aa13.23□□□□□ -0.29
HOXA9-203ENST00000465941 NIPSNAP3BQ9BS92 247 aa13.23□□□□□ -0.29
HOXA9-203ENST00000465941 ZNF705GA8MUZ8 300 aaPredicted RBP13.22□□□□□ -0.29
HOXA9-203ENST00000465941 C3orf84H3BNL1 204 aa13.22□□□□□ -0.29
HOXA9-203ENST00000465941 IGLV2-11P01706 119 aa13.22□□□□□ -0.29
HOXA9-203ENST00000465941 PRM2P04554 102 aa13.22□□□□□ -0.29
HOXA9-203ENST00000465941 BTN1A1Q13410 526 aa13.22□□□□□ -0.29
HOXA9-203ENST00000465941 TMEM75Q8N9X5 138 aa13.22□□□□□ -0.29
HOXA9-203ENST00000465941 LOC102723971A0A1B0GUV8 181 aa13.21□□□□□ -0.29
HOXA9-203ENST00000465941 PEX7O00628 323 aa13.21□□□□□ -0.29
HOXA9-203ENST00000465941 PMS2P11Q13670 270 aa13.21□□□□□ -0.29
HOXA9-203ENST00000465941 PRR9Q5T870 116 aa13.21□□□□□ -0.29
HOXA9-203ENST00000465941 C11orf45Q8TAV5 145 aa13.21□□□□□ -0.29
HOXA9-203ENST00000465941 TVP23CQ96ET8 276 aa13.21□□□□□ -0.29
HOXA9-203ENST00000465941 PYGO2Q9BRQ0 406 aa13.21□□□□□ -0.29
HOXA9-203ENST00000465941 PSG8Q9UQ74 426 aa13.21□□□□□ -0.29
HOXA9-203ENST00000465941 F6UZH7 168 aa13.2□□□□□ -0.3
HOXA9-203ENST00000465941 AZU1P20160 251 aa13.2□□□□□ -0.3
HOXA9-203ENST00000465941 ATP5G3P48201 142 aa13.2□□□□□ -0.3
HOXA9-203ENST00000465941 FLI1Q01543 452 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms