RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 DISP2A7MBM2 1401 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 B4DSR2 109 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 E7EUB6 86 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 UQCRQO14949 82 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 NUP98P52948 1817 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 DSCR4P56555 118 aaPredicted RBP1.02□□□□□ -2.25
CLK1-208ENST00000464454 MRPS36P82909 103 aaKnown RBP1.02□□□□□ -2.25
CLK1-208ENST00000464454 ERCC6Q03468 1493 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 TCOF1Q13428 1488 aaKnown RBP1.02□□□□□ -2.25
CLK1-208ENST00000464454 FAM135BQ49AJ0 1406 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 TMEM244Q5VVB8 128 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 RPL13AP3Q6NVV1 102 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 HAGHLQ6PII5 290 aaPredicted RBP1.02□□□□□ -2.25
CLK1-208ENST00000464454 C4orf22Q6V702 233 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 TMEM91Q6ZNR0 172 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 TEN1Q86WV5 123 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 LZICQ8WZA0 190 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 MAGOHBQ96A72 148 aaKnown RBP1.02□□□□□ -2.25
CLK1-208ENST00000464454 TP53RKQ96S44 253 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 PFDN5Q99471 154 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 ERG28Q9UKR5 140 aa1.02□□□□□ -2.25
CLK1-208ENST00000464454 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.01□□□□□ -2.25
CLK1-208ENST00000464454 MIF4GDA9UHW6 222 aaKnown RBP1.01□□□□□ -2.25
CLK1-208ENST00000464454 C17orf112F2Z3M2 114 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 RER1O15258 196 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 CCL16O15467 120 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 DLEU1O43261 78 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 IGLC6P0CF74 106 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 COX4I1P13073 169 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 ZNF25P17030 456 aaPredicted RBP1.01□□□□□ -2.25
CLK1-208ENST00000464454 AKR1D1P51857 326 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 FAM216BQ8N7L0 139 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 OR5D14Q8NGL3 314 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 OR10AC1Q8NH08 325 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 FAM107BQ9H098 131 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 CALML5Q9NZT1 146 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 NUP210LQ5VU65 1888 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 PEAK1Q9H792 1746 aa1.01□□□□□ -2.25
CLK1-208ENST00000464454 PIK3C2AO00443 1686 aa1□□□□□ -2.25
CLK1-208ENST00000464454 ARHGAP31Q2M1Z3 1444 aa1□□□□□ -2.25
CLK1-208ENST00000464454 TMEM2Q9UHN6 1383 aa1□□□□□ -2.25
CLK1-208ENST00000464454 DSPPQ9NZW4 1301 aa1□□□□□ -2.25
CLK1-208ENST00000464454 KIAA1549Q9HCM3 1950 aa1□□□□□ -2.25
CLK1-208ENST00000464454 TRAV27A0A087WT01 109 aa1□□□□□ -2.25
CLK1-208ENST00000464454 TRBV6-4A0A1B0GX49 114 aa1□□□□□ -2.25
CLK1-208ENST00000464454 LINC00587B1AMM8 73 aa1□□□□□ -2.25
CLK1-208ENST00000464454 C5orf58C9J3I9 102 aa1□□□□□ -2.25
CLK1-208ENST00000464454 K7ERJ3 54 aa1□□□□□ -2.25
CLK1-208ENST00000464454 TPST1O60507 370 aa1□□□□□ -2.25
CLK1-208ENST00000464454 DNAL4O96015 105 aa1□□□□□ -2.25
CLK1-208ENST00000464454 IFNGP01579 166 aa1□□□□□ -2.25
CLK1-208ENST00000464454 MT-ND4LP03901 98 aa1□□□□□ -2.25
CLK1-208ENST00000464454 SLC25A5P05141 298 aaKnown RBP1□□□□□ -2.25
CLK1-208ENST00000464454 LINC00694P0DN24 101 aa1□□□□□ -2.25
CLK1-208ENST00000464454 FABP2P12104 132 aa1□□□□□ -2.25
CLK1-208ENST00000464454 HLA-DRB4P13762 266 aa1□□□□□ -2.25
CLK1-208ENST00000464454 CMPK1P30085 196 aa1□□□□□ -2.25
CLK1-208ENST00000464454 RPS25P62851 125 aaKnown RBP1□□□□□ -2.25
CLK1-208ENST00000464454 KLRD1Q13241 179 aa1□□□□□ -2.25
CLK1-208ENST00000464454 DIAPH2-AS1Q14236 149 aa1□□□□□ -2.25
CLK1-208ENST00000464454 IFT20Q8IY31 132 aa1□□□□□ -2.25
CLK1-208ENST00000464454 LINC00269Q8N2A0 174 aa1□□□□□ -2.25
CLK1-208ENST00000464454 HYLS1Q96M11 299 aa1□□□□□ -2.25
CLK1-208ENST00000464454 PRELID3AQ96N28 172 aa1□□□□□ -2.25
CLK1-208ENST00000464454 TSC22D3Q99576 134 aa1□□□□□ -2.25
CLK1-208ENST00000464454 NIT2Q9NQR4 276 aa1□□□□□ -2.25
CLK1-208ENST00000464454 ORMDL1Q9P0S3 153 aa1□□□□□ -2.25
CLK1-208ENST00000464454 DNAJC15Q9Y5T4 150 aa1□□□□□ -2.25
CLK1-208ENST00000464454 HLA-DRB4X5D2U9 266 aa1□□□□□ -2.25
CLK1-208ENST00000464454 PLXNA4Q9HCM2 1894 aa1□□□□□ -2.25
CLK1-208ENST00000464454 WDR97A6NE52 1622 aa1□□□□□ -2.25
CLK1-208ENST00000464454 HEATR1Q9H583 2144 aaKnown RBP1□□□□□ -2.25
CLK1-208ENST00000464454 LAMB4A4D0S4 1761 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 OR2T8A6NH00 312 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 A6NN06 94 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 HBDP02042 147 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 PAEPP09466 180 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 SAA1P0DJI8 122 aaPredicted RBP0.99□□□□□ -2.25
CLK1-208ENST00000464454 C1orf134Q5TEV5 83 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 CROCCP2Q86T23 111 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 C10orf111Q8N326 155 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 OR4B1Q8NGF8 309 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 OR5H6Q8NGV6 325 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 POP5Q969H6 163 aaKnown RBP0.99□□□□□ -2.25
CLK1-208ENST00000464454 CHCHD1Q96BP2 118 aaKnown RBP0.99□□□□□ -2.25
CLK1-208ENST00000464454 SDF2Q99470 211 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 LINC00470Q9BZP3 86 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 ZNF518AQ6AHZ1 1483 aa0.99□□□□□ -2.25
CLK1-208ENST00000464454 E9PCH4 1651 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 CCDC171Q6TFL3 1326 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 MYLKQ15746 1914 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 ALPK3Q96L96 1907 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 TRAV10A0A0B4J240 114 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 A0A1B0GV90 55 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 M0R2Z0 102 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 NPFFO15130 113 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 CCL25O15444 150 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 LYRM1O43325 122 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 APOC1P02654 83 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 TCRAP04437 139 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms