RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 SPINK4O60575 86 aa15.46■□□□□ 0.07
USP4-208ENST00000464168 NXPH4O95158 308 aa15.46■□□□□ 0.07
USP4-208ENST00000464168 RNASE4P34096 147 aaKnown RBP15.46■□□□□ 0.07
USP4-208ENST00000464168 RPL29P47914 159 aaKnown RBP15.46■□□□□ 0.07
USP4-208ENST00000464168 CAV2P51636 162 aa15.46■□□□□ 0.07
USP4-208ENST00000464168 VWC2Q2TAL6 325 aa15.46■□□□□ 0.07
USP4-208ENST00000464168 RBM38Q9H0Z9 239 aaKnown RBP15.46■□□□□ 0.07
USP4-208ENST00000464168 PAX4O43316 350 aa15.45■□□□□ 0.06
USP4-208ENST00000464168 TCL1AP56279 114 aa15.45■□□□□ 0.06
USP4-208ENST00000464168 ZNF846Q147U1 533 aa15.45■□□□□ 0.06
USP4-208ENST00000464168 C12orf45Q8N5I9 185 aaPredicted RBP15.45■□□□□ 0.06
USP4-208ENST00000464168 TMEM14CQ9P0S9 112 aa15.45■□□□□ 0.06
USP4-208ENST00000464168 TNFRSF18Q9Y5U5 241 aa15.45■□□□□ 0.06
USP4-208ENST00000464168 HIST1H1EP10412 219 aaKnown RBP15.44■□□□□ 0.06
USP4-208ENST00000464168 CNPY1Q3B7I2 92 aa15.44■□□□□ 0.06
USP4-208ENST00000464168 ST6GAL2Q96JF0 529 aa15.44■□□□□ 0.06
USP4-208ENST00000464168 C20orf85Q9H1P6 137 aa15.44■□□□□ 0.06
USP4-208ENST00000464168 PRELID1Q9Y255 219 aa15.44■□□□□ 0.06
USP4-208ENST00000464168 ICOSQ9Y6W8 199 aa15.44■□□□□ 0.06
USP4-208ENST00000464168 FAM25EA8MYX2 175 aa15.43■□□□□ 0.06
USP4-208ENST00000464168 MPDU1O75352 247 aa15.43■□□□□ 0.06
USP4-208ENST00000464168 CRISP2P16562 243 aa15.43■□□□□ 0.06
USP4-208ENST00000464168 XGP55808 180 aa15.43■□□□□ 0.06
USP4-208ENST00000464168 CHAC2Q8WUX2 184 aa15.43■□□□□ 0.06
USP4-208ENST00000464168 TP53TG3Q9ULZ0 132 aa15.43■□□□□ 0.06
USP4-208ENST00000464168 IGHV3-53P01767 116 aa15.42■□□□□ 0.06
USP4-208ENST00000464168 GPX1P07203 203 aa15.42■□□□□ 0.06
USP4-208ENST00000464168 PYYP10082 97 aa15.42■□□□□ 0.06
USP4-208ENST00000464168 PDE6HQ13956 83 aa15.42■□□□□ 0.06
USP4-208ENST00000464168 IBA57Q5T440 356 aaKnown RBP15.42■□□□□ 0.06
USP4-208ENST00000464168 Q6ZQT7 251 aa15.42■□□□□ 0.06
USP4-208ENST00000464168 C9orf47Q6ZRZ4 202 aa15.42■□□□□ 0.06
USP4-208ENST00000464168 LYPD1Q8N2G4 141 aa15.42■□□□□ 0.06
USP4-208ENST00000464168 EXOC3-AS1Q8N2X6 119 aa15.42■□□□□ 0.06
USP4-208ENST00000464168 TIMM9Q9Y5J7 89 aa15.42■□□□□ 0.06
USP4-208ENST00000464168 UBE2L5PA0A1B0GUS4 154 aa15.41■□□□□ 0.06
USP4-208ENST00000464168 EREGO14944 169 aa15.41■□□□□ 0.06
USP4-208ENST00000464168 IL7P13232 177 aa15.41■□□□□ 0.06
USP4-208ENST00000464168 S100A11P31949 105 aa15.41■□□□□ 0.06
USP4-208ENST00000464168 ERVFC1-1P60608 527 aa15.41■□□□□ 0.06
USP4-208ENST00000464168 BAXQ07812 192 aa15.41■□□□□ 0.06
USP4-208ENST00000464168 LYPD5Q6UWN5 251 aa15.41■□□□□ 0.06
USP4-208ENST00000464168 ZFAND2AQ8N6M9 145 aa15.41■□□□□ 0.06
USP4-208ENST00000464168 PRO0255Q9UI72 69 aa15.41■□□□□ 0.06
USP4-208ENST00000464168 C5orf51A6NDU8 294 aa15.4■□□□□ 0.06
USP4-208ENST00000464168 PLA2G10O15496 165 aa15.4■□□□□ 0.06
USP4-208ENST00000464168 NMBP08949 121 aa15.4■□□□□ 0.06
USP4-208ENST00000464168 SULT1A1P50225 295 aa15.4■□□□□ 0.06
USP4-208ENST00000464168 PRR9Q5T870 116 aa15.4■□□□□ 0.06
USP4-208ENST00000464168 CDPF1Q6NVV7 123 aa15.4■□□□□ 0.06
USP4-208ENST00000464168 BLNKQ8WV28 456 aa15.4■□□□□ 0.06
USP4-208ENST00000464168 LYRM2Q9NU23 88 aaPredicted RBP15.4■□□□□ 0.06
USP4-208ENST00000464168 MRPL16Q9NX20 251 aaKnown RBP15.4■□□□□ 0.06
USP4-208ENST00000464168 PTTG2Q9NZH5 202 aa15.4■□□□□ 0.06
USP4-208ENST00000464168 SRRM2Q9UQ35 2752 aaKnown RBP15.39■□□□□ 0.05
USP4-208ENST00000464168 IGKV2-40A0A087WW87 121 aaPredicted RBP15.39■□□□□ 0.05
USP4-208ENST00000464168 IGSF23A1L1A6 192 aa15.39■□□□□ 0.05
USP4-208ENST00000464168 RGS13O14921 159 aa15.39■□□□□ 0.05
USP4-208ENST00000464168 IGKV2D-40P01614 121 aaPredicted RBP15.39■□□□□ 0.05
USP4-208ENST00000464168 CRYBA4P53673 196 aa15.39■□□□□ 0.05
USP4-208ENST00000464168 FHL2Q14192 279 aa15.39■□□□□ 0.05
USP4-208ENST00000464168 TMEM252Q8N6L7 170 aa15.39■□□□□ 0.05
USP4-208ENST00000464168 C2orf50Q96LR7 162 aa15.39■□□□□ 0.05
USP4-208ENST00000464168 VGLL1Q99990 258 aa15.39■□□□□ 0.05
USP4-208ENST00000464168 HHLA3Q9XRX5 114 aa15.39■□□□□ 0.05
USP4-208ENST00000464168 IGHV1OR15-1A0A075B7D0 117 aa15.38■□□□□ 0.05
USP4-208ENST00000464168 PRAF2O60831 178 aa15.38■□□□□ 0.05
USP4-208ENST00000464168 INAFM2P0DMQ5 153 aa15.38■□□□□ 0.05
USP4-208ENST00000464168 PVALBP20472 110 aaPredicted RBP15.38■□□□□ 0.05
USP4-208ENST00000464168 FGF7P21781 194 aa15.38■□□□□ 0.05
USP4-208ENST00000464168 SLAQ13239 276 aa15.38■□□□□ 0.05
USP4-208ENST00000464168 ICAM4Q14773 271 aa15.38■□□□□ 0.05
USP4-208ENST00000464168 GCSAMLQ5JQS6 135 aa15.38■□□□□ 0.05
USP4-208ENST00000464168 C8orf49Q96NF6 230 aa15.38■□□□□ 0.05
USP4-208ENST00000464168 SEC22CQ9BRL7 303 aa15.38■□□□□ 0.05
USP4-208ENST00000464168 MYCBP2O75592 4640 aa15.37■□□□□ 0.05
USP4-208ENST00000464168 DNAH10OSP0CZ25 163 aa15.37■□□□□ 0.05
USP4-208ENST00000464168 IL15RAQ13261 267 aa15.37■□□□□ 0.05
USP4-208ENST00000464168 MRPL23Q16540 153 aaKnown RBP15.37■□□□□ 0.05
USP4-208ENST00000464168 TMEM78Q5T7P6 136 aa15.37■□□□□ 0.05
USP4-208ENST00000464168 NFE4Q86UQ8 179 aa15.37■□□□□ 0.05
USP4-208ENST00000464168 AAMDCQ9H7C9 122 aa15.37■□□□□ 0.05
USP4-208ENST00000464168 TRAV6A0A075B6T7 132 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 A0A087WTM6 91 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 TCRBP04435 133 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 KRTAP10-1P60331 282 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 S100A10P60903 97 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 HBG1P69891 147 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 HBG2P69892 147 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 FAM122CQ6P4D5 195 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 NEGR1Q7Z3B1 354 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 STX12Q86Y82 276 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 FAM167A-AS1Q96KT0 104 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 SLC25A2Q9BXI2 301 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 ZNF492Q9P255 531 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 VPS13BQ7Z7G8 4022 aa15.36■□□□□ 0.05
USP4-208ENST00000464168 LYRM1O43325 122 aa15.35■□□□□ 0.05
USP4-208ENST00000464168 RAB32Q13637 225 aa15.35■□□□□ 0.05
USP4-208ENST00000464168 ATP6V1FQ16864 119 aa15.35■□□□□ 0.05
USP4-208ENST00000464168 ARPC5LQ9BPX5 153 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms