RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 RNF222A6NCQ9 220 aa9.16□□□□□ -0.94
XRN1-203ENST00000463916 KLLNB2CW77 178 aa9.16□□□□□ -0.94
XRN1-203ENST00000463916 HMGB3O15347 200 aaKnown RBP9.16□□□□□ -0.94
XRN1-203ENST00000463916 TMEM263Q8WUH6 116 aaKnown RBP9.16□□□□□ -0.94
XRN1-203ENST00000463916 C16orf74Q96GX8 76 aa9.16□□□□□ -0.94
XRN1-203ENST00000463916 Q9H3A6 140 aa9.16□□□□□ -0.94
XRN1-203ENST00000463916 NOP10Q9NPE3 64 aaKnown RBP9.16□□□□□ -0.94
XRN1-203ENST00000463916 ZNF324O75467 553 aaPredicted RBP9.16□□□□□ -0.94
XRN1-203ENST00000463916 BTN1A1Q13410 526 aa9.16□□□□□ -0.94
XRN1-203ENST00000463916 ACOT6Q3I5F7 207 aaPredicted RBP9.16□□□□□ -0.94
XRN1-203ENST00000463916 KHDC3LQ587J8 217 aa9.16□□□□□ -0.94
XRN1-203ENST00000463916 PRR9Q5T870 116 aa9.16□□□□□ -0.94
XRN1-203ENST00000463916 OR2T35Q8NGX2 323 aa9.16□□□□□ -0.94
XRN1-203ENST00000463916 TIMM8BQ9Y5J9 83 aaPredicted RBP9.16□□□□□ -0.94
XRN1-203ENST00000463916 SLC25A5P05141 298 aaKnown RBP9.15□□□□□ -0.94
XRN1-203ENST00000463916 ATP6V0CP27449 155 aa9.15□□□□□ -0.94
XRN1-203ENST00000463916 ZNF266Q14584 549 aa9.15□□□□□ -0.94
XRN1-203ENST00000463916 ZNF493Q6ZR52 646 aa9.15□□□□□ -0.94
XRN1-203ENST00000463916 ZFAND2AQ8N6M9 145 aa9.15□□□□□ -0.94
XRN1-203ENST00000463916 OR10G4Q8NGN3 311 aa9.15□□□□□ -0.94
XRN1-203ENST00000463916 OR10G9Q8NGN4 311 aa9.15□□□□□ -0.94
XRN1-203ENST00000463916 OR10G7Q8NGN6 311 aa9.15□□□□□ -0.94
XRN1-203ENST00000463916 Q8TAT8 98 aa9.15□□□□□ -0.94
XRN1-203ENST00000463916 ASB13Q8WXK3 278 aa9.15□□□□□ -0.94
XRN1-203ENST00000463916 SH3BGRL3Q9H299 93 aa9.15□□□□□ -0.94
XRN1-203ENST00000463916 ZNF492Q9P255 531 aa9.15□□□□□ -0.94
XRN1-203ENST00000463916 DNAH6Q9C0G6 4158 aa9.15□□□□□ -0.95
XRN1-203ENST00000463916 FXYD6-FXYD2A0A087WZ82 144 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 C7orf71A4D174 169 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 CRISP2P16562 243 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
XRN1-203ENST00000463916 TAS2R45P59539 299 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 TMEM88Q6PEY1 159 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 LYPD1Q8N2G4 141 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 TNFSF18Q9UNG2 199 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 A0A1W2PPV4 95 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 TMEM78Q5T7P6 136 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 OR2G3Q8NGZ4 309 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 HYLS1Q96M11 299 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 DNAH10Q8IVF4 4471 aa9.14□□□□□ -0.95
XRN1-203ENST00000463916 GPX1P07203 203 aa9.13□□□□□ -0.95
XRN1-203ENST00000463916 RPL7L1Q6DKI1 246 aaKnown RBP9.13□□□□□ -0.95
XRN1-203ENST00000463916 CCDC28AQ8IWP9 274 aa9.13□□□□□ -0.95
XRN1-203ENST00000463916 INO80EQ8NBZ0 244 aaPredicted RBP9.13□□□□□ -0.95
XRN1-203ENST00000463916 FAM210BQ96KR6 192 aa9.13□□□□□ -0.95
XRN1-203ENST00000463916 PYGO2Q9BRQ0 406 aa9.13□□□□□ -0.95
XRN1-203ENST00000463916 CBY3A6NI87 242 aa9.12□□□□□ -0.95
XRN1-203ENST00000463916 DIRC3C9JPN6 131 aa9.12□□□□□ -0.95
XRN1-203ENST00000463916 ZNF138P52744 262 aa9.12□□□□□ -0.95
XRN1-203ENST00000463916 PSMG3Q9BT73 122 aaPredicted RBP9.12□□□□□ -0.95
XRN1-203ENST00000463916 PGPA6NDG6 321 aa9.12□□□□□ -0.95
XRN1-203ENST00000463916 SMLR1H3BR10 107 aa9.12□□□□□ -0.95
XRN1-203ENST00000463916 NMBP08949 121 aa9.12□□□□□ -0.95
XRN1-203ENST00000463916 ARL14EPLP0DKL9 152 aa9.12□□□□□ -0.95
XRN1-203ENST00000463916 CSN1S1P47710 185 aa9.12□□□□□ -0.95
XRN1-203ENST00000463916 PQLC2Q6ZP29 291 aa9.12□□□□□ -0.95
XRN1-203ENST00000463916 LINC00612Q8N6U2 182 aa9.12□□□□□ -0.95
XRN1-203ENST00000463916 RAB24Q969Q5 203 aa9.12□□□□□ -0.95
XRN1-203ENST00000463916 F5H768 121 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 STAG3L2P0CL84 134 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 STAG3L3P0CL85 134 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 P0DMU3 169 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 FAM231AP0DMU4 169 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 FAM231CP0DMU5 169 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 CDC34P49427 236 aaPredicted RBP9.11□□□□□ -0.95
XRN1-203ENST00000463916 SSX7Q7RTT5 188 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 POM121L12Q8N7R1 296 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 C11orf72Q8NBR9 251 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 GSN-AS1Q9NRJ2 163 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 TP53TG3Q9ULZ0 132 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 BIRC6Q9NR09 4857 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 RBAKDNA6NC62 111 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 ATP5G1P05496 136 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 ATP5G3P48201 142 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 SERF2P84101 59 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 OTORQ9NRC9 128 aa9.11□□□□□ -0.95
XRN1-203ENST00000463916 DNAH2Q9P225 4427 aa9.1□□□□□ -0.95
XRN1-203ENST00000463916 GAGE12BA1L429 117 aa9.1□□□□□ -0.95
XRN1-203ENST00000463916 GAGE7O76087 117 aa9.1□□□□□ -0.95
XRN1-203ENST00000463916 GAGE12FP0CL80 117 aa9.1□□□□□ -0.95
XRN1-203ENST00000463916 GAGE12GP0CL81 117 aa9.1□□□□□ -0.95
XRN1-203ENST00000463916 GAGE12IP0CL82 117 aa9.1□□□□□ -0.95
XRN1-203ENST00000463916 Q6ZTI0 123 aa9.1□□□□□ -0.95
XRN1-203ENST00000463916 LINC00467Q9BRT7 94 aa9.1□□□□□ -0.95
XRN1-203ENST00000463916 SNURFLB1AK76 121 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 GNG5P63218 68 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 DAZ2Q13117 558 aaKnown RBP9.09□□□□□ -0.95
XRN1-203ENST00000463916 EIF4E3Q8N5X7 224 aaKnown RBP9.09□□□□□ -0.95
XRN1-203ENST00000463916 RXFP4Q8TDU9 374 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 RPH3ALQ9UNE2 315 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 KLF12Q9Y4X4 402 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 TRAV8-1A0A0A6YYK1 113 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 TRBV7-9A0A0J9YWB2 115 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 ARPC5O15511 151 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 ANXA2RQ3ZCQ2 193 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 GOLT1AQ6ZVE7 132 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 SUN5Q8TC36 379 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 CYTL1Q9NRR1 136 aa9.09□□□□□ -0.95
XRN1-203ENST00000463916 MBP02144 154 aa9.08□□□□□ -0.96
XRN1-203ENST00000463916 HOXA5P20719 270 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms