RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 PRR20EP86478 221 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 PRR20CP86479 221 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 PRR20DP86480 221 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 PRR20BP86481 221 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 PRR20AP86496 221 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 CYYR1Q96J86 154 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 SMKR1H3BMG3 65 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 DIAPH2-AS1Q14236 149 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 IGHV7-4-1A0A0J9YVY3 117 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 S100A7L2Q5SY68 101 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 OVOL2Q9BRP0 275 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 CTSZQ9UBR2 303 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 TTC28Q96AY4 2481 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 KIF26AQ9ULI4 1882 aaPredicted RBP10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 SRSF2Q01130 221 aaKnown RBP10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 FXYD5Q96DB9 178 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 V9GYV3 84 aa10.69□□□□□ -0.7
CHRNA4-202ENST00000463705 C22orf46C9J442 243 aa10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 SS18Q15532 418 aa10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 DMRTC2Q8IXT2 367 aaPredicted RBP10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 BCL6BQ8N143 479 aaPredicted RBP10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 LURAP1LQ8IV03 231 aa10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 MRPL53Q96EL3 112 aaKnown RBP10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 SPRY4Q9C004 299 aa10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 MUC6Q6W4X9 2439 aa10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 ZNF114Q8NC26 417 aa10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 TIMM21Q9BVV7 248 aa10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 hDV102S1A0JD36 115 aa10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 C3orf56Q8N813 242 aa10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 C18orf32Q8TCD1 76 aa10.68□□□□□ -0.7
CHRNA4-202ENST00000463705 TMEM213A2RRL7 107 aa10.67□□□□□ -0.7
CHRNA4-202ENST00000463705 GTF3C1Q12789 2109 aa10.67□□□□□ -0.7
CHRNA4-202ENST00000463705 CDKN1BP46527 198 aa10.67□□□□□ -0.7
CHRNA4-202ENST00000463705 DKK4Q9UBT3 224 aa10.67□□□□□ -0.7
CHRNA4-202ENST00000463705 PCP4P48539 62 aa10.67□□□□□ -0.7
CHRNA4-202ENST00000463705 TCTEX1D4Q5JR98 221 aa10.67□□□□□ -0.7
CHRNA4-202ENST00000463705 FAM120AOSQ5T036 256 aa10.67□□□□□ -0.7
CHRNA4-202ENST00000463705 I3L3M4 83 aa10.67□□□□□ -0.7
CHRNA4-202ENST00000463705 C1orf159Q96HA4 380 aa10.67□□□□□ -0.7
CHRNA4-202ENST00000463705 IGLC7A0M8Q6 106 aa10.66□□□□□ -0.7
CHRNA4-202ENST00000463705 SPINK13Q1W4C9 94 aa10.66□□□□□ -0.7
CHRNA4-202ENST00000463705 GAGE13Q4V321 117 aa10.66□□□□□ -0.7
CHRNA4-202ENST00000463705 ZC2HC1BQ5TFG8 222 aa10.66□□□□□ -0.7
CHRNA4-202ENST00000463705 NPBQ8NG41 125 aa10.66□□□□□ -0.7
CHRNA4-202ENST00000463705 KLF2Q9Y5W3 355 aaPredicted RBP10.66□□□□□ -0.7
CHRNA4-202ENST00000463705 A0A1B0GV72 72 aa10.66□□□□□ -0.7
CHRNA4-202ENST00000463705 A8MWP6 167 aa10.65□□□□□ -0.7
CHRNA4-202ENST00000463705 MAPK1IP1LQ8NDC0 245 aa10.65□□□□□ -0.7
CHRNA4-202ENST00000463705 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.7
CHRNA4-202ENST00000463705 COL4A3Q01955 1670 aa10.65□□□□□ -0.7
CHRNA4-202ENST00000463705 TRAV8-4A0A0B4J246 113 aa10.65□□□□□ -0.7
CHRNA4-202ENST00000463705 RBAKDNA6NC62 111 aa10.65□□□□□ -0.7
CHRNA4-202ENST00000463705 PHLDA1Q8WV24 401 aaPredicted RBP10.65□□□□□ -0.7
CHRNA4-202ENST00000463705 ZNF124Q15973 351 aa10.65□□□□□ -0.7
CHRNA4-202ENST00000463705 ZNF491Q8N8L2 437 aa10.65□□□□□ -0.7
CHRNA4-202ENST00000463705 ZFHX2Q9C0A1 2572 aaPredicted RBP10.65□□□□□ -0.71
CHRNA4-202ENST00000463705 LEPROTO15243 131 aa10.65□□□□□ -0.71
CHRNA4-202ENST00000463705 APOC4P55056 127 aa10.65□□□□□ -0.71
CHRNA4-202ENST00000463705 LTAP01374 205 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 TDGF1P3P51864 188 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 C6orf226Q5I0X4 101 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 NEGR1Q7Z3B1 354 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 ATP6V0BQ99437 205 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 JPT2Q9H910 190 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 XCL2Q9UBD3 114 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 C2orf16Q68DN1 1984 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 SPXQ9BT56 116 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 TP53TG1Q9Y2A0 90 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 PAX4O43316 350 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 ANXA2RQ3ZCQ2 193 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 MRPL51Q4U2R6 128 aaKnown RBP10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 DOCK10Q96BY6 2186 aa10.64□□□□□ -0.71
CHRNA4-202ENST00000463705 A0A1W2PNU3 283 aaPredicted RBP10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 ESDP10768 282 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 LYPD6BQ8NI32 183 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 MALRD1Q5VYJ5 2156 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 A0A0U1RRA0 63 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 SPRNQ5BIV9 151 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 LENEPQ9Y5L5 61 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 CREBBPQ92793 2442 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 TRBV25-1A0A075B6N4 114 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 DEFB130BP0DP73 79 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 DEFB130AP0DP74 79 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 SFTA2Q6UW10 78 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 C2orf66Q6UXQ4 117 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 CHAC1Q9BUX1 264 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 AZU1P20160 251 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 DEFB121Q5J5C9 76 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 PYGO2Q9BRQ0 406 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 KLK9Q9UKQ9 250 aa10.63□□□□□ -0.71
CHRNA4-202ENST00000463705 ZNF664Q8N3J9 261 aa10.62□□□□□ -0.71
CHRNA4-202ENST00000463705 ZC2HC1AQ96GY0 325 aa10.62□□□□□ -0.71
CHRNA4-202ENST00000463705 CST9LQ9H4G1 147 aa10.62□□□□□ -0.71
CHRNA4-202ENST00000463705 GRNP28799 593 aaKnown RBP10.62□□□□□ -0.71
CHRNA4-202ENST00000463705 PMVKQ15126 192 aa10.62□□□□□ -0.71
CHRNA4-202ENST00000463705 FOXI2Q6ZQN5 318 aa10.62□□□□□ -0.71
CHRNA4-202ENST00000463705 C20orf144Q9BQM9 153 aa10.62□□□□□ -0.71
CHRNA4-202ENST00000463705 TRAV13-1A0A0B4J241 112 aa10.62□□□□□ -0.71
CHRNA4-202ENST00000463705 DEFB104AQ8WTQ1 72 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms