RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 OVOL1O14753 267 aa14.31□□□□□ -0.12
CCDC78-206ENST00000463539 Q8TAT8 98 aa14.31□□□□□ -0.12
CCDC78-206ENST00000463539 COLCA2A8K830 154 aa14.31□□□□□ -0.12
CCDC78-206ENST00000463539 S100PP25815 95 aa14.31□□□□□ -0.12
CCDC78-206ENST00000463539 PAFAH1B2P68402 229 aa14.31□□□□□ -0.12
CCDC78-206ENST00000463539 ERCC8Q13216 396 aa14.31□□□□□ -0.12
CCDC78-206ENST00000463539 SAPCD1Q5SSQ6 148 aa14.31□□□□□ -0.12
CCDC78-206ENST00000463539 FAM231DQ6ZW35 169 aa14.31□□□□□ -0.12
CCDC78-206ENST00000463539 ELOBQ15370 118 aa14.3□□□□□ -0.12
CCDC78-206ENST00000463539 TMEM78Q5T7P6 136 aa14.3□□□□□ -0.12
CCDC78-206ENST00000463539 ZC2HC1AQ96GY0 325 aa14.3□□□□□ -0.12
CCDC78-206ENST00000463539 YPEL4Q96NS1 127 aa14.3□□□□□ -0.12
CCDC78-206ENST00000463539 V9GYV3 84 aa14.3□□□□□ -0.12
CCDC78-206ENST00000463539 K7EQG2 157 aa14.29□□□□□ -0.12
CCDC78-206ENST00000463539 SNRPD3P62318 126 aaKnown RBP14.29□□□□□ -0.12
CCDC78-206ENST00000463539 RBPMS2Q6ZRY4 209 aaKnown RBP14.29□□□□□ -0.12
CCDC78-206ENST00000463539 PRR25Q96S07 402 aa14.29□□□□□ -0.12
CCDC78-206ENST00000463539 NDFIP1Q9BT67 221 aa14.29□□□□□ -0.12
CCDC78-206ENST00000463539 ZNF492Q9P255 531 aa14.29□□□□□ -0.12
CCDC78-206ENST00000463539 KCNIP4Q6PIL6 250 aa14.29□□□□□ -0.12
CCDC78-206ENST00000463539 OR10J6PQ8NGY7 276 aa14.29□□□□□ -0.12
CCDC78-206ENST00000463539 AGPAT4-IT1Q9H0P7 198 aa14.29□□□□□ -0.12
CCDC78-206ENST00000463539 ZNF705GA8MUZ8 300 aaPredicted RBP14.28□□□□□ -0.12
CCDC78-206ENST00000463539 CT45A10P0DMU9 189 aa14.28□□□□□ -0.12
CCDC78-206ENST00000463539 C9orf47Q6ZRZ4 202 aa14.28□□□□□ -0.12
CCDC78-206ENST00000463539 NUDT10Q8NFP7 164 aa14.28□□□□□ -0.12
CCDC78-206ENST00000463539 DAZAP1Q96EP5 407 aaKnown RBP14.28□□□□□ -0.12
CCDC78-206ENST00000463539 NUDT11Q96G61 164 aa14.28□□□□□ -0.12
CCDC78-206ENST00000463539 C8orf49Q96NF6 230 aa14.28□□□□□ -0.12
CCDC78-206ENST00000463539 IMMP2LQ96T52 175 aa14.28□□□□□ -0.12
CCDC78-206ENST00000463539 GPR61Q9BZJ8 451 aa14.28□□□□□ -0.12
CCDC78-206ENST00000463539 PFN1P07737 140 aaKnown RBP14.27□□□□□ -0.12
CCDC78-206ENST00000463539 ZNF688P0C7X2 276 aa14.27□□□□□ -0.12
CCDC78-206ENST00000463539 ZNF138P52744 262 aa14.27□□□□□ -0.12
CCDC78-206ENST00000463539 DEFB114Q30KQ6 69 aa14.27□□□□□ -0.12
CCDC78-206ENST00000463539 LINC00322Q6ZN03 302 aaPredicted RBP14.27□□□□□ -0.12
CCDC78-206ENST00000463539 TMEM61Q8N0U2 210 aa14.27□□□□□ -0.12
CCDC78-206ENST00000463539 WNK1Q9H4A3 2382 aa14.27□□□□□ -0.13
CCDC78-206ENST00000463539 TGIF2-C20orf24A0A0A6YYL0 155 aa14.27□□□□□ -0.13
CCDC78-206ENST00000463539 C19orf71A6NCJ1 209 aa14.27□□□□□ -0.13
CCDC78-206ENST00000463539 GATCO43716 136 aaKnown RBP14.27□□□□□ -0.13
CCDC78-206ENST00000463539 ZNF705DP0CH99 300 aaPredicted RBP14.27□□□□□ -0.13
CCDC78-206ENST00000463539 ZNF705BP0CI00 300 aaPredicted RBP14.27□□□□□ -0.13
CCDC78-206ENST00000463539 PSMG4Q5JS54 123 aa14.27□□□□□ -0.13
CCDC78-206ENST00000463539 COX8CQ7Z4L0 72 aa14.27□□□□□ -0.13
CCDC78-206ENST00000463539 SIGLEC8Q9NYZ4 499 aa14.27□□□□□ -0.13
CCDC78-206ENST00000463539 IL36BQ9NZH7 164 aa14.27□□□□□ -0.13
CCDC78-206ENST00000463539 P01737 135 aa14.26□□□□□ -0.13
CCDC78-206ENST00000463539 DEFB1P60022 68 aa14.26□□□□□ -0.13
CCDC78-206ENST00000463539 HIST1H1AQ02539 215 aaPredicted RBP14.26□□□□□ -0.13
CCDC78-206ENST00000463539 OR8A1Q8NGG7 326 aa14.26□□□□□ -0.13
CCDC78-206ENST00000463539 TRAV2A0A0B4J234 112 aa14.25□□□□□ -0.13
CCDC78-206ENST00000463539 A0A1W2PPQ1 181 aa14.25□□□□□ -0.13
CCDC78-206ENST00000463539 NPIPB6E9PJ23 425 aa14.25□□□□□ -0.13
CCDC78-206ENST00000463539 F6UB75 175 aa14.25□□□□□ -0.13
CCDC78-206ENST00000463539 PF4P02776 101 aa14.25□□□□□ -0.13
CCDC78-206ENST00000463539 CXCL1P09341 107 aa14.25□□□□□ -0.13
CCDC78-206ENST00000463539 FAM3BP58499 235 aaPredicted RBP14.25□□□□□ -0.13
CCDC78-206ENST00000463539 CD300EQ496F6 205 aaPredicted RBP14.25□□□□□ -0.13
CCDC78-206ENST00000463539 TMA7Q9Y2S6 64 aaKnown RBP14.25□□□□□ -0.13
CCDC78-206ENST00000463539 CA1P00915 261 aaPredicted RBP14.25□□□□□ -0.13
CCDC78-206ENST00000463539 RAB5AP20339 215 aa14.25□□□□□ -0.13
CCDC78-206ENST00000463539 LINC00477Q96M19 166 aa14.25□□□□□ -0.13
CCDC78-206ENST00000463539 RPP21Q9H633 154 aaKnown RBP14.25□□□□□ -0.13
CCDC78-206ENST00000463539 ATRQ13535 2644 aa14.24□□□□□ -0.13
CCDC78-206ENST00000463539 TRBV24-1A0A075B6N3 115 aa14.24□□□□□ -0.13
CCDC78-206ENST00000463539 SMUG1Q53HV7 270 aa14.24□□□□□ -0.13
CCDC78-206ENST00000463539 PPP1R14DQ9NXH3 145 aa14.24□□□□□ -0.13
CCDC78-206ENST00000463539 TENM1Q9UKZ4 2725 aa14.23□□□□□ -0.13
CCDC78-206ENST00000463539 SAP30O75446 220 aa14.23□□□□□ -0.13
CCDC78-206ENST00000463539 CRIP1P50238 77 aa14.23□□□□□ -0.13
CCDC78-206ENST00000463539 FAM162BQ5T6X4 162 aa14.23□□□□□ -0.13
CCDC78-206ENST00000463539 FAM210BQ96KR6 192 aa14.23□□□□□ -0.13
CCDC78-206ENST00000463539 CITED1Q99966 193 aa14.23□□□□□ -0.13
CCDC78-206ENST00000463539 TRAV25A0A0B4J276 109 aa14.22□□□□□ -0.13
CCDC78-206ENST00000463539 SPAG8Q99932 426 aaPredicted RBP14.22□□□□□ -0.13
CCDC78-206ENST00000463539 LENEPQ9Y5L5 61 aa14.22□□□□□ -0.13
CCDC78-206ENST00000463539 CT83Q5H943 113 aa14.22□□□□□ -0.13
CCDC78-206ENST00000463539 OR4B1Q8NGF8 309 aa14.22□□□□□ -0.13
CCDC78-206ENST00000463539 PYGO2Q9BRQ0 406 aa14.22□□□□□ -0.13
CCDC78-206ENST00000463539 OR4C46A6NHA9 309 aa14.21□□□□□ -0.13
CCDC78-206ENST00000463539 SH2D1AO60880 128 aa14.21□□□□□ -0.13
CCDC78-206ENST00000463539 TCL1AP56279 114 aa14.21□□□□□ -0.13
CCDC78-206ENST00000463539 KRTAP24-1Q3LI83 254 aa14.21□□□□□ -0.13
CCDC78-206ENST00000463539 TSKUQ8WUA8 353 aa14.21□□□□□ -0.13
CCDC78-206ENST00000463539 BTF3L4Q96K17 158 aa14.21□□□□□ -0.13
CCDC78-206ENST00000463539 SMIM27A0A1W2PRY6 76 aa14.2□□□□□ -0.14
CCDC78-206ENST00000463539 ZNF80P51504 273 aaPredicted RBP14.2□□□□□ -0.14
CCDC78-206ENST00000463539 LINC00482Q8N8I6 264 aa14.2□□□□□ -0.14
CCDC78-206ENST00000463539 OR2D3Q8NGH3 330 aa14.2□□□□□ -0.14
CCDC78-206ENST00000463539 TRAV9-1A0A075B6T8 112 aa14.2□□□□□ -0.14
CCDC78-206ENST00000463539 EBLN2Q6P2I7 272 aa14.2□□□□□ -0.14
CCDC78-206ENST00000463539 A0A0J9YX75 114 aa14.19□□□□□ -0.14
CCDC78-206ENST00000463539 A8MWL6 223 aa14.19□□□□□ -0.14
CCDC78-206ENST00000463539 RPS10P46783 165 aaKnown RBP14.19□□□□□ -0.14
CCDC78-206ENST00000463539 GDF5OSQ5U4N7 250 aa14.19□□□□□ -0.14
CCDC78-206ENST00000463539 IZUMO1RA6ND01 250 aa14.18□□□□□ -0.14
CCDC78-206ENST00000463539 CD33P20138 364 aa14.18□□□□□ -0.14
CCDC78-206ENST00000463539 FOXI2Q6ZQN5 318 aa14.18□□□□□ -0.14
CCDC78-206ENST00000463539 NEU1Q99519 415 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms