RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 IGKV3-20P01619 116 aa10.19□□□□□ -0.78
PHACTR4-203ENST00000463428 RPL35AP18077 110 aaKnown RBP10.19□□□□□ -0.78
PHACTR4-203ENST00000463428 TOR2AQ5JU69 321 aa10.19□□□□□ -0.78
PHACTR4-203ENST00000463428 C2CD4CQ8TF44 421 aa10.19□□□□□ -0.78
PHACTR4-203ENST00000463428 FAM19A4Q96LR4 140 aa10.19□□□□□ -0.78
PHACTR4-203ENST00000463428 TUBA4BQ9H853 241 aa10.19□□□□□ -0.78
PHACTR4-203ENST00000463428 KLF12Q9Y4X4 402 aa10.19□□□□□ -0.78
PHACTR4-203ENST00000463428 LOC102724200A0A096LPH7 203 aaPredicted RBP10.18□□□□□ -0.78
PHACTR4-203ENST00000463428 TRAV8-1A0A0A6YYK1 113 aa10.18□□□□□ -0.78
PHACTR4-203ENST00000463428 F6UZH7 168 aa10.18□□□□□ -0.78
PHACTR4-203ENST00000463428 NDUFS6O75380 124 aaKnown RBP10.18□□□□□ -0.78
PHACTR4-203ENST00000463428 GIG44P09565 113 aaPredicted RBP10.18□□□□□ -0.78
PHACTR4-203ENST00000463428 SRSF3P84103 164 aaKnown RBP10.18□□□□□ -0.78
PHACTR4-203ENST00000463428 TMEM75Q8N9X5 138 aa10.18□□□□□ -0.78
PHACTR4-203ENST00000463428 ODF3Q96PU9 254 aa10.18□□□□□ -0.78
PHACTR4-203ENST00000463428 SLC35B3Q9H1N7 401 aa10.18□□□□□ -0.78
PHACTR4-203ENST00000463428 ZNF492Q9P255 531 aa10.18□□□□□ -0.78
PHACTR4-203ENST00000463428 TRAV34A0A0B4J273 112 aa10.17□□□□□ -0.78
PHACTR4-203ENST00000463428 PDE6DO43924 150 aa10.17□□□□□ -0.78
PHACTR4-203ENST00000463428 FRMD6-AS1P0C7T7 363 aa10.17□□□□□ -0.78
PHACTR4-203ENST00000463428 ZNF138P52744 262 aa10.17□□□□□ -0.78
PHACTR4-203ENST00000463428 DEFA6Q01524 100 aa10.17□□□□□ -0.78
PHACTR4-203ENST00000463428 TVP23CQ96ET8 276 aa10.17□□□□□ -0.78
PHACTR4-203ENST00000463428 SGK494Q96LW2 274 aa10.17□□□□□ -0.78
PHACTR4-203ENST00000463428 EIF5A2Q9GZV4 153 aaKnown RBP10.17□□□□□ -0.78
PHACTR4-203ENST00000463428 MED9Q9NWA0 146 aa10.17□□□□□ -0.78
PHACTR4-203ENST00000463428 PSG8Q9UQ74 426 aa10.17□□□□□ -0.78
PHACTR4-203ENST00000463428 KIR2DL5BA0A0G2JN68 375 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 KIR2DL5BA0A0G2JPC4 375 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 C9JQL5 133 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 SRP19P09132 144 aaKnown RBP10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 FLI1Q01543 452 aaPredicted RBP10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 TMEM183BQ1AE95 376 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 TMEM78Q5T7P6 136 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 KIR2DL5AQ8N109 375 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 KIR2DL5BQ8NHK3 375 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 Q8TAT8 98 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 ASCL2Q99929 193 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 TRBV7-9A0A0J9YWB2 115 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 TRBV6-1A0A0K0K1D8 114 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 RAB19A4D1S5 217 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 LINC00862A6NCI5 91 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 FBLL1A6NHQ2 334 aaKnown RBP10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 TMEM250H0YL14 139 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 K7EQM0 130 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 CRXO43186 299 aaPredicted RBP10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 CRISP2P16562 243 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 DEFB121Q5J5C9 76 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 MORN3Q6PF18 240 aaPredicted RBP10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 MRAPQ8TCY5 172 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 DERL1Q9BUN8 251 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 CSTL1Q9H114 145 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 LENEPQ9Y5L5 61 aa10.16□□□□□ -0.78
PHACTR4-203ENST00000463428 M0R2Z0 102 aa10.15□□□□□ -0.79
PHACTR4-203ENST00000463428 AKR1C3P42330 323 aa10.15□□□□□ -0.79
PHACTR4-203ENST00000463428 FXYD7P58549 80 aa10.15□□□□□ -0.79
PHACTR4-203ENST00000463428 KIR3DS1Q14943 382 aa10.15□□□□□ -0.79
PHACTR4-203ENST00000463428 SPINK13Q1W4C9 94 aa10.15□□□□□ -0.79
PHACTR4-203ENST00000463428 ZFAND2AQ8N6M9 145 aa10.15□□□□□ -0.79
PHACTR4-203ENST00000463428 FMC1Q96HJ9 113 aa10.15□□□□□ -0.79
PHACTR4-203ENST00000463428 SMDT1Q9H4I9 107 aa10.15□□□□□ -0.79
PHACTR4-203ENST00000463428 KLLNB2CW77 178 aa10.14□□□□□ -0.79
PHACTR4-203ENST00000463428 S100A9P06702 114 aaKnown RBP10.14□□□□□ -0.79
PHACTR4-203ENST00000463428 RPL35P42766 123 aaKnown RBP10.14□□□□□ -0.79
PHACTR4-203ENST00000463428 CDKN1BP46527 198 aa10.14□□□□□ -0.79
PHACTR4-203ENST00000463428 NUTF2P61970 127 aaKnown RBP10.14□□□□□ -0.79
PHACTR4-203ENST00000463428 PEA15Q15121 130 aa10.14□□□□□ -0.79
PHACTR4-203ENST00000463428 PRNTQ86SH4 94 aa10.14□□□□□ -0.79
PHACTR4-203ENST00000463428 Q86TA4 180 aa10.14□□□□□ -0.79
PHACTR4-203ENST00000463428 CSNK1G2-AS1Q8NCQ2 148 aa10.14□□□□□ -0.79
PHACTR4-203ENST00000463428 LEPP41159 167 aa10.13□□□□□ -0.79
PHACTR4-203ENST00000463428 APOC4P55056 127 aa10.13□□□□□ -0.79
PHACTR4-203ENST00000463428 TAS2R60P59551 318 aa10.13□□□□□ -0.79
PHACTR4-203ENST00000463428 PRR9Q5T870 116 aa10.13□□□□□ -0.79
PHACTR4-203ENST00000463428 TRAV12-2A0A075B6T6 113 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 UBE2CO00762 179 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 CA1P00915 261 aaPredicted RBP10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 LTAP01374 205 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 AMBPP02760 352 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 TSPOP30536 169 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 UBE2G1P62253 170 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 COX8CQ7Z4L0 72 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 SBSPONQ8IVN8 264 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 IGF2BP2-AS1Q96M15 143 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 C8orf49Q96NF6 230 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 MLST8Q9BVC4 326 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 PARLQ9H300 379 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 TREM1Q9NP99 234 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 XCL2Q9UBD3 114 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 ZFP30Q9Y2G7 519 aa10.12□□□□□ -0.79
PHACTR4-203ENST00000463428 TRBV20OR9-2A0A075B6H5 130 aa10.11□□□□□ -0.79
PHACTR4-203ENST00000463428 IGLV2-8P01709 118 aa10.11□□□□□ -0.79
PHACTR4-203ENST00000463428 RBMY1A1P0DJD3 496 aaKnown RBP10.11□□□□□ -0.79
PHACTR4-203ENST00000463428 RBMY1CP0DJD4 496 aa10.11□□□□□ -0.79
PHACTR4-203ENST00000463428 RBMY1FQ15415 496 aaKnown RBP10.11□□□□□ -0.79
PHACTR4-203ENST00000463428 SAPCD1Q5SSQ6 148 aa10.11□□□□□ -0.79
PHACTR4-203ENST00000463428 GFI1BQ5VTD9 330 aa10.11□□□□□ -0.79
PHACTR4-203ENST00000463428 EIF4E3Q8N5X7 224 aaKnown RBP10.11□□□□□ -0.79
PHACTR4-203ENST00000463428 C1QTNF4Q9BXJ3 329 aa10.11□□□□□ -0.79
PHACTR4-203ENST00000463428 MEGF8Q7Z7M0 2845 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms