RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 SH2D1AO60880 128 aa9.77□□□□□ -0.85
VAPB-203ENST00000463370 SERF1AO75920 110 aa9.77□□□□□ -0.85
VAPB-203ENST00000463370 RBPMS2Q6ZRY4 209 aaKnown RBP9.77□□□□□ -0.85
VAPB-203ENST00000463370 OR4B1Q8NGF8 309 aa9.77□□□□□ -0.85
VAPB-203ENST00000463370 NPFFR1Q9GZQ6 430 aa9.77□□□□□ -0.85
VAPB-203ENST00000463370 ARL6IP6Q8N6S5 226 aa9.77□□□□□ -0.85
VAPB-203ENST00000463370 C20orf173Q96LM9 149 aa9.77□□□□□ -0.85
VAPB-203ENST00000463370 RCHY1Q96PM5 261 aa9.77□□□□□ -0.85
VAPB-203ENST00000463370 SLC50A1Q9BRV3 221 aa9.77□□□□□ -0.85
VAPB-203ENST00000463370 GFRA4Q9GZZ7 299 aa9.77□□□□□ -0.85
VAPB-203ENST00000463370 COX19Q49B96 90 aa9.76□□□□□ -0.85
VAPB-203ENST00000463370 RASL11AQ6T310 242 aa9.76□□□□□ -0.85
VAPB-203ENST00000463370 ATP5L2Q7Z4Y8 100 aa9.76□□□□□ -0.85
VAPB-203ENST00000463370 SIGLECL1Q8N7X8 197 aa9.76□□□□□ -0.85
VAPB-203ENST00000463370 PRDM13Q9H4Q3 707 aa9.76□□□□□ -0.85
VAPB-203ENST00000463370 PEF1Q9UBV8 284 aaKnown RBP9.76□□□□□ -0.85
VAPB-203ENST00000463370 ZNF705DP0CH99 300 aaPredicted RBP9.75□□□□□ -0.85
VAPB-203ENST00000463370 ZNF705BP0CI00 300 aaPredicted RBP9.75□□□□□ -0.85
VAPB-203ENST00000463370 CT45A10P0DMU9 189 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 DEFB1P60022 68 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 HBBP68871 147 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 COX8CQ7Z4L0 72 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 ZNF575Q86XF7 245 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 IGKV3-7A0A075B6H7 116 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 Q0VG73 95 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 IQCJQ1A5X6 159 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 SAPCD1Q5SSQ6 148 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 FAM162BQ5T6X4 162 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 BAGE3Q86Y29 109 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 C16orf92Q96LL3 132 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 AGPAT4-IT1Q9H0P7 198 aa9.75□□□□□ -0.85
VAPB-203ENST00000463370 FAM231BA6NCW3 169 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 ARMS2P0C7Q2 107 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 FOXA3P55318 350 aaPredicted RBP9.74□□□□□ -0.85
VAPB-203ENST00000463370 FAM209BQ5JX69 171 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 TPPP3Q9BW30 176 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 RHPN1-AS1Q9BWJ2 59 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 HECTD1Q9ULT8 2610 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 A8MWP6 167 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 SOCS3O14543 225 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 CD33P20138 364 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 SSTP61278 116 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 TMEM18Q96B42 140 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 MYO9AB2RTY4 2548 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 NF1P21359 2839 aa9.74□□□□□ -0.85
VAPB-203ENST00000463370 IGHV7-4-1A0A0J9YVY3 117 aa9.73□□□□□ -0.85
VAPB-203ENST00000463370 FAM181BA6NEQ2 426 aa9.73□□□□□ -0.85
VAPB-203ENST00000463370 SRD5A1P18405 259 aa9.73□□□□□ -0.85
VAPB-203ENST00000463370 Q6ZQT7 251 aa9.73□□□□□ -0.85
VAPB-203ENST00000463370 DAZ1Q9NQZ3 744 aaKnown RBP9.73□□□□□ -0.85
VAPB-203ENST00000463370 ACANP16112 2415 aa9.73□□□□□ -0.85
VAPB-203ENST00000463370 MUC21A0A0G2JKD1 596 aa9.73□□□□□ -0.85
VAPB-203ENST00000463370 MUC21A0A140T8X8 626 aa9.73□□□□□ -0.85
VAPB-203ENST00000463370 RPL11P62913 178 aaKnown RBP9.73□□□□□ -0.85
VAPB-203ENST00000463370 MUC21Q5SSG8 566 aa9.73□□□□□ -0.85
VAPB-203ENST00000463370 HIST2H2BDQ6DRA6 164 aa9.73□□□□□ -0.85
VAPB-203ENST00000463370 C18orf32Q8TCD1 76 aa9.73□□□□□ -0.85
VAPB-203ENST00000463370 GSN-AS1Q9NRJ2 163 aa9.73□□□□□ -0.85
VAPB-203ENST00000463370 TMEM189A5PLL7 270 aa9.72□□□□□ -0.85
VAPB-203ENST00000463370 RBAKDNA6NC62 111 aa9.72□□□□□ -0.85
VAPB-203ENST00000463370 ESDP10768 282 aa9.72□□□□□ -0.85
VAPB-203ENST00000463370 KRTAP1-1Q07627 177 aa9.72□□□□□ -0.85
VAPB-203ENST00000463370 C18orf65Q6ZTR6 163 aa9.72□□□□□ -0.85
VAPB-203ENST00000463370 ALKBH7Q9BT30 221 aaPredicted RBP9.72□□□□□ -0.85
VAPB-203ENST00000463370 OR10J3Q5JRS4 329 aa9.72□□□□□ -0.85
VAPB-203ENST00000463370 FASNP49327 2511 aaKnown RBP9.71□□□□□ -0.85
VAPB-203ENST00000463370 A0A1B0GUT8 65 aa9.71□□□□□ -0.85
VAPB-203ENST00000463370 FBLL1A6NHQ2 334 aaKnown RBP9.71□□□□□ -0.85
VAPB-203ENST00000463370 JOSD1Q15040 202 aaPredicted RBP9.71□□□□□ -0.85
VAPB-203ENST00000463370 MYOZ3Q8TDC0 251 aa9.71□□□□□ -0.85
VAPB-203ENST00000463370 MRPL53Q96EL3 112 aaKnown RBP9.71□□□□□ -0.85
VAPB-203ENST00000463370 SMPXQ9UHP9 88 aa9.71□□□□□ -0.85
VAPB-203ENST00000463370 TMEM89A2RUT3 159 aa9.71□□□□□ -0.86
VAPB-203ENST00000463370 FOXE3Q13461 319 aa9.71□□□□□ -0.86
VAPB-203ENST00000463370 LYZL1Q6UWQ5 148 aa9.71□□□□□ -0.86
VAPB-203ENST00000463370 NRN1Q9NPD7 142 aa9.71□□□□□ -0.86
VAPB-203ENST00000463370 C11orf21Q9P2W6 132 aa9.71□□□□□ -0.86
VAPB-203ENST00000463370 RNF114Q9Y508 228 aa9.71□□□□□ -0.86
VAPB-203ENST00000463370 IGHV4OR15-8A0A075B7B6 117 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 A0A087WW49 117 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 A0A1W2PS18 150 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 TMEM213A2RRL7 107 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 F6UB75 175 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 ZNF138P52744 262 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 FAM106AQ4KMX7 169 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 Q6ZWC4 215 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 ZNF738Q8NE65 137 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 NDFIP1Q9BT67 221 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 TMEM78Q5T7P6 136 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 PRR9Q5T870 116 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 C9orf47Q6ZRZ4 202 aa9.7□□□□□ -0.86
VAPB-203ENST00000463370 M0QZ24 198 aa9.69□□□□□ -0.86
VAPB-203ENST00000463370 ORM1P02763 201 aa9.69□□□□□ -0.86
VAPB-203ENST00000463370 ELANEP08246 267 aa9.69□□□□□ -0.86
VAPB-203ENST00000463370 Q8N2B8 174 aa9.69□□□□□ -0.86
VAPB-203ENST00000463370 K7EMT4 169 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 LGALS1P09382 135 aaKnown RBP9.68□□□□□ -0.86
VAPB-203ENST00000463370 BMI1P35226 326 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 SYNJ2BPP57105 145 aa9.68□□□□□ -0.86
VAPB-203ENST00000463370 DEFB136Q30KP8 78 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms