RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 CELA1Q9UNI1 258 aa11.99□□□□□ -0.49
HLA-DPA1-245ENST00000463066 DIRC3C9JPN6 131 aa11.98□□□□□ -0.49
HLA-DPA1-245ENST00000463066 SEC11BP0C7V7 166 aa11.98□□□□□ -0.49
HLA-DPA1-245ENST00000463066 EMP1P54849 157 aa11.98□□□□□ -0.49
HLA-DPA1-245ENST00000463066 C9orf47Q6ZRZ4 202 aa11.98□□□□□ -0.49
HLA-DPA1-245ENST00000463066 C9orf62Q8N4C0 152 aa11.98□□□□□ -0.49
HLA-DPA1-245ENST00000463066 FAM19A4Q96LR4 140 aa11.98□□□□□ -0.49
HLA-DPA1-245ENST00000463066 NEU1Q99519 415 aa11.98□□□□□ -0.49
HLA-DPA1-245ENST00000463066 MAP1LC3B2A6NCE7 125 aa11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 GGTLC3B5MD39 225 aa11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 AZU1P20160 251 aa11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 LEPP41159 167 aa11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 CSN1S1P47710 185 aa11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 NKX2-5P52952 324 aaPredicted RBP11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 PRR9Q5T870 116 aa11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 ZNF767PQ75MW2 155 aa11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 FAM213BQ8TBF2 198 aa11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 LINC00477Q96M19 166 aa11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 ODF3Q96PU9 254 aa11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 MAP1LC3BQ9GZQ8 125 aa11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 YTHDF2Q9Y5A9 579 aaKnown RBP11.97□□□□□ -0.49
HLA-DPA1-245ENST00000463066 TRAV12-3A0A0B4J271 114 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 A0A1B0GV50 99 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 CXorf65A6NEN9 183 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 HBE1P02100 147 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 SLC25A5P05141 298 aaKnown RBP11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 TPT1P13693 172 aaKnown RBP11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 TSPOP30536 169 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 UBE2G2P60604 165 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 BTN1A1Q13410 526 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 ZFP69Q49AA0 526 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 TMEM78Q5T7P6 136 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 Q6ZQT7 251 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 GOLT1AQ6ZVE7 132 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 STOML3Q8TAV4 291 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 C11orf45Q8TAV5 145 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 LINC01587Q99440 93 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 TMEM167BQ9NRX6 74 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 ZNF492Q9P255 531 aa11.96□□□□□ -0.49
HLA-DPA1-245ENST00000463066 LOC102723971A0A1B0GUV8 181 aa11.95□□□□□ -0.5
HLA-DPA1-245ENST00000463066 SMIM9A6NGZ8 99 aa11.95□□□□□ -0.5
HLA-DPA1-245ENST00000463066 ZNF138P52744 262 aa11.95□□□□□ -0.5
HLA-DPA1-245ENST00000463066 RRN3P1Q2M238 152 aa11.95□□□□□ -0.5
HLA-DPA1-245ENST00000463066 ZFAND2AQ8N6M9 145 aa11.95□□□□□ -0.5
HLA-DPA1-245ENST00000463066 CMTM2Q8TAZ6 248 aa11.95□□□□□ -0.5
HLA-DPA1-245ENST00000463066 RXFP4Q8TDU9 374 aa11.95□□□□□ -0.5
HLA-DPA1-245ENST00000463066 SGK494Q96LW2 274 aa11.95□□□□□ -0.5
HLA-DPA1-245ENST00000463066 STARD9Q9P2P6 4700 aa11.94□□□□□ -0.5
HLA-DPA1-245ENST00000463066 TRAV8-1A0A0A6YYK1 113 aa11.94□□□□□ -0.5
HLA-DPA1-245ENST00000463066 HTN1P15515 57 aa11.94□□□□□ -0.5
HLA-DPA1-245ENST00000463066 CRISP2P16562 243 aa11.94□□□□□ -0.5
HLA-DPA1-245ENST00000463066 RNASE4P34096 147 aaKnown RBP11.94□□□□□ -0.5
HLA-DPA1-245ENST00000463066 SUMO1P63165 101 aaKnown RBP11.94□□□□□ -0.5
HLA-DPA1-245ENST00000463066 EIF5AP63241 154 aaKnown RBP11.94□□□□□ -0.5
HLA-DPA1-245ENST00000463066 C7orf71A4D174 169 aa11.93□□□□□ -0.5
HLA-DPA1-245ENST00000463066 RBAKDNA6NC62 111 aa11.93□□□□□ -0.5
HLA-DPA1-245ENST00000463066 KLLNB2CW77 178 aa11.93□□□□□ -0.5
HLA-DPA1-245ENST00000463066 FAM74A1Q5RGS3 127 aa11.93□□□□□ -0.5
HLA-DPA1-245ENST00000463066 BOLA1Q9Y3E2 137 aa11.93□□□□□ -0.5
HLA-DPA1-245ENST00000463066 PLAC8L1A1L4L8 177 aa11.92□□□□□ -0.5
HLA-DPA1-245ENST00000463066 UMAD1C9J7I0 102 aa11.92□□□□□ -0.5
HLA-DPA1-245ENST00000463066 C12orf74Q32Q52 190 aa11.92□□□□□ -0.5
HLA-DPA1-245ENST00000463066 SLC51BQ86UW2 128 aa11.92□□□□□ -0.5
HLA-DPA1-245ENST00000463066 C5orf17Q8NAS9 161 aa11.92□□□□□ -0.5
HLA-DPA1-245ENST00000463066 SFT2D1Q8WV19 159 aa11.92□□□□□ -0.5
HLA-DPA1-245ENST00000463066 MBD3L1Q8WWY6 194 aa11.92□□□□□ -0.5
HLA-DPA1-245ENST00000463066 TVP23CQ96ET8 276 aa11.92□□□□□ -0.5
HLA-DPA1-245ENST00000463066 FAM74A7A6NL05 159 aa11.91□□□□□ -0.5
HLA-DPA1-245ENST00000463066 TCRAP04437 139 aa11.91□□□□□ -0.5
HLA-DPA1-245ENST00000463066 GPX1P07203 203 aa11.91□□□□□ -0.5
HLA-DPA1-245ENST00000463066 TAS2R60P59551 318 aa11.91□□□□□ -0.5
HLA-DPA1-245ENST00000463066 FAM222AQ5U5X8 452 aa11.91□□□□□ -0.5
HLA-DPA1-245ENST00000463066 Q6ZTC4 211 aa11.91□□□□□ -0.5
HLA-DPA1-245ENST00000463066 TMEM256Q8N2U0 113 aa11.91□□□□□ -0.5
HLA-DPA1-245ENST00000463066 PHLDA1Q8WV24 401 aaPredicted RBP11.91□□□□□ -0.5
HLA-DPA1-245ENST00000463066 EPDR1Q9UM22 224 aa11.91□□□□□ -0.5
HLA-DPA1-245ENST00000463066 DYNC2H1Q8NCM8 4307 aaKnown RBP11.9□□□□□ -0.5
HLA-DPA1-245ENST00000463066 A0A1W2PRE2 83 aa11.9□□□□□ -0.5
HLA-DPA1-245ENST00000463066 H7BYZ3 331 aa11.9□□□□□ -0.5
HLA-DPA1-245ENST00000463066 ZNF324O75467 553 aaPredicted RBP11.9□□□□□ -0.5
HLA-DPA1-245ENST00000463066 CEMP1Q6PRD7 247 aaPredicted RBP11.9□□□□□ -0.5
HLA-DPA1-245ENST00000463066 C20orf144Q9BQM9 153 aa11.9□□□□□ -0.5
HLA-DPA1-245ENST00000463066 DKK2Q9UBU2 259 aa11.9□□□□□ -0.5
HLA-DPA1-245ENST00000463066 F6UZH7 168 aa11.89□□□□□ -0.51
HLA-DPA1-245ENST00000463066 H2AFB1P0C5Y9 115 aa11.89□□□□□ -0.51
HLA-DPA1-245ENST00000463066 CCL20P78556 96 aa11.89□□□□□ -0.51
HLA-DPA1-245ENST00000463066 DPPA3Q6W0C5 159 aa11.89□□□□□ -0.51
HLA-DPA1-245ENST00000463066 LINC00479Q96M42 142 aa11.89□□□□□ -0.51
HLA-DPA1-245ENST00000463066 NIPSNAP3BQ9BS92 247 aa11.89□□□□□ -0.51
HLA-DPA1-245ENST00000463066 TRAV34A0A0B4J273 112 aa11.88□□□□□ -0.51
HLA-DPA1-245ENST00000463066 TMEM189A5PLL7 270 aa11.88□□□□□ -0.51
HLA-DPA1-245ENST00000463066 PAGE4O60829 102 aa11.88□□□□□ -0.51
HLA-DPA1-245ENST00000463066 IFNA7P01567 189 aa11.88□□□□□ -0.51
HLA-DPA1-245ENST00000463066 IGLV2-11P01706 119 aa11.88□□□□□ -0.51
HLA-DPA1-245ENST00000463066 SPART-AS1P0CW21 52 aa11.88□□□□□ -0.51
HLA-DPA1-245ENST00000463066 ATP5G3P48201 142 aa11.88□□□□□ -0.51
HLA-DPA1-245ENST00000463066 ARL6IP6Q8N6S5 226 aa11.88□□□□□ -0.51
HLA-DPA1-245ENST00000463066 NMBP08949 121 aa11.87□□□□□ -0.51
HLA-DPA1-245ENST00000463066 SULT1A2P50226 295 aa11.87□□□□□ -0.51
HLA-DPA1-245ENST00000463066 CST9LP1Q5W188 147 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms