RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 FAM19A4Q96LR4 140 aa13.43□□□□□ -0.26
COL9A3-203ENST00000462700 SH3BGRL3Q9H299 93 aa13.43□□□□□ -0.26
COL9A3-203ENST00000462700 Q9H3A6 140 aa13.43□□□□□ -0.26
COL9A3-203ENST00000462700 PLAC8L1A1L4L8 177 aa13.42□□□□□ -0.26
COL9A3-203ENST00000462700 HTN1P15515 57 aa13.42□□□□□ -0.26
COL9A3-203ENST00000462700 SERF2P84101 59 aa13.42□□□□□ -0.26
COL9A3-203ENST00000462700 C16orf74Q96GX8 76 aa13.42□□□□□ -0.26
COL9A3-203ENST00000462700 PLA2G2EQ9NZK7 142 aa13.42□□□□□ -0.26
COL9A3-203ENST00000462700 APLNQ9ULZ1 77 aa13.42□□□□□ -0.26
COL9A3-203ENST00000462700 IGHV4-4A0A075B6R2 117 aa13.41□□□□□ -0.26
COL9A3-203ENST00000462700 BORCS7-ASMTA0A0B4J1R7 106 aa13.41□□□□□ -0.26
COL9A3-203ENST00000462700 LYRM9A8MSI8 78 aa13.41□□□□□ -0.26
COL9A3-203ENST00000462700 HMGB3O15347 200 aaKnown RBP13.41□□□□□ -0.26
COL9A3-203ENST00000462700 CDC34P49427 236 aaPredicted RBP13.41□□□□□ -0.26
COL9A3-203ENST00000462700 TMEM78Q5T7P6 136 aa13.41□□□□□ -0.26
COL9A3-203ENST00000462700 VGLL1Q99990 258 aa13.41□□□□□ -0.26
COL9A3-203ENST00000462700 TRAV12-3A0A0B4J271 114 aa13.4□□□□□ -0.26
COL9A3-203ENST00000462700 KLLNB2CW77 178 aa13.4□□□□□ -0.26
COL9A3-203ENST00000462700 SMLR1H3BR10 107 aa13.4□□□□□ -0.26
COL9A3-203ENST00000462700 ARPC5O15511 151 aa13.4□□□□□ -0.26
COL9A3-203ENST00000462700 MBP02144 154 aa13.4□□□□□ -0.26
COL9A3-203ENST00000462700 SLC25A5P05141 298 aaKnown RBP13.4□□□□□ -0.26
COL9A3-203ENST00000462700 CSN1S1P47710 185 aa13.4□□□□□ -0.26
COL9A3-203ENST00000462700 DAD1P61803 113 aa13.4□□□□□ -0.26
COL9A3-203ENST00000462700 LGALS9CQ6DKI2 356 aa13.4□□□□□ -0.26
COL9A3-203ENST00000462700 RNASE8Q8TDE3 154 aaKnown RBP13.4□□□□□ -0.26
COL9A3-203ENST00000462700 GNPNAT1Q96EK6 184 aaPredicted RBP13.4□□□□□ -0.26
COL9A3-203ENST00000462700 STAG3L2P0CL84 134 aa13.39□□□□□ -0.27
COL9A3-203ENST00000462700 STAG3L3P0CL85 134 aa13.39□□□□□ -0.27
COL9A3-203ENST00000462700 CRISP2P16562 243 aa13.39□□□□□ -0.27
COL9A3-203ENST00000462700 ZNF493Q6ZR52 646 aa13.39□□□□□ -0.27
COL9A3-203ENST00000462700 TMEM263Q8WUH6 116 aaKnown RBP13.39□□□□□ -0.27
COL9A3-203ENST00000462700 ZNF492Q9P255 531 aa13.39□□□□□ -0.27
COL9A3-203ENST00000462700 C7orf71A4D174 169 aa13.38□□□□□ -0.27
COL9A3-203ENST00000462700 RBAKDNA6NC62 111 aa13.38□□□□□ -0.27
COL9A3-203ENST00000462700 NMBP08949 121 aa13.38□□□□□ -0.27
COL9A3-203ENST00000462700 ARL14EPLP0DKL9 152 aa13.38□□□□□ -0.27
COL9A3-203ENST00000462700 BTN1A1Q13410 526 aa13.38□□□□□ -0.27
COL9A3-203ENST00000462700 RXFP4Q8TDU9 374 aa13.38□□□□□ -0.27
COL9A3-203ENST00000462700 RAB24Q969Q5 203 aa13.38□□□□□ -0.27
COL9A3-203ENST00000462700 OTORQ9NRC9 128 aa13.38□□□□□ -0.27
COL9A3-203ENST00000462700 DIRC3C9JPN6 131 aa13.37□□□□□ -0.27
COL9A3-203ENST00000462700 TAAR5O14804 337 aa13.37□□□□□ -0.27
COL9A3-203ENST00000462700 ZNF138P52744 262 aa13.37□□□□□ -0.27
COL9A3-203ENST00000462700 CD300CQ08708 224 aa13.37□□□□□ -0.27
COL9A3-203ENST00000462700 CCDC28AQ8IWP9 274 aa13.37□□□□□ -0.27
COL9A3-203ENST00000462700 ZFAND2AQ8N6M9 145 aa13.37□□□□□ -0.27
COL9A3-203ENST00000462700 Q8TAT8 98 aa13.37□□□□□ -0.27
COL9A3-203ENST00000462700 HYLS1Q96M11 299 aa13.37□□□□□ -0.27
COL9A3-203ENST00000462700 PYGO2Q9BRQ0 406 aa13.37□□□□□ -0.27
COL9A3-203ENST00000462700 TIMM8BQ9Y5J9 83 aaPredicted RBP13.37□□□□□ -0.27
COL9A3-203ENST00000462700 PGPA6NDG6 321 aa13.36□□□□□ -0.27
COL9A3-203ENST00000462700 ZNF324O75467 553 aaPredicted RBP13.36□□□□□ -0.27
COL9A3-203ENST00000462700 GPX1P07203 203 aa13.36□□□□□ -0.27
COL9A3-203ENST00000462700 HTN3P15516 51 aa13.36□□□□□ -0.27
COL9A3-203ENST00000462700 FAM74A1Q5RGS3 127 aa13.36□□□□□ -0.27
COL9A3-203ENST00000462700 PRR9Q5T870 116 aa13.36□□□□□ -0.27
COL9A3-203ENST00000462700 ACTR3CQ9C0K3 210 aaPredicted RBP13.36□□□□□ -0.27
COL9A3-203ENST00000462700 CYTL1Q9NRR1 136 aa13.36□□□□□ -0.27
COL9A3-203ENST00000462700 VPS13DQ5THJ4 4388 aa13.36□□□□□ -0.27
COL9A3-203ENST00000462700 TRBV7-9A0A0J9YWB2 115 aa13.35□□□□□ -0.27
COL9A3-203ENST00000462700 DEFB130BP0DP73 79 aa13.35□□□□□ -0.27
COL9A3-203ENST00000462700 DEFB130AP0DP74 79 aa13.35□□□□□ -0.27
COL9A3-203ENST00000462700 RNASE4P34096 147 aaKnown RBP13.35□□□□□ -0.27
COL9A3-203ENST00000462700 CMTM2Q8TAZ6 248 aa13.35□□□□□ -0.27
COL9A3-203ENST00000462700 SUN5Q8TC36 379 aa13.35□□□□□ -0.27
COL9A3-203ENST00000462700 NDUFAF3Q9BU61 184 aa13.35□□□□□ -0.27
COL9A3-203ENST00000462700 NOP10Q9NPE3 64 aaKnown RBP13.35□□□□□ -0.27
COL9A3-203ENST00000462700 GCHFRP30047 84 aa13.34□□□□□ -0.27
COL9A3-203ENST00000462700 ZNF345Q14585 488 aa13.34□□□□□ -0.27
COL9A3-203ENST00000462700 SSX7Q7RTT5 188 aa13.34□□□□□ -0.27
COL9A3-203ENST00000462700 ARL6IP6Q8N6S5 226 aa13.34□□□□□ -0.27
COL9A3-203ENST00000462700 OR11H4Q8NGC9 324 aa13.34□□□□□ -0.27
COL9A3-203ENST00000462700 FAM210BQ96KR6 192 aa13.34□□□□□ -0.27
COL9A3-203ENST00000462700 LINC00467Q9BRT7 94 aa13.34□□□□□ -0.27
COL9A3-203ENST00000462700 RPH3ALQ9UNE2 315 aa13.34□□□□□ -0.27
COL9A3-203ENST00000462700 CXorf1O96002 111 aa13.33□□□□□ -0.28
COL9A3-203ENST00000462700 KCNRGQ8N5I3 272 aa13.33□□□□□ -0.28
COL9A3-203ENST00000462700 HMSDA8MTL9 139 aa13.32□□□□□ -0.28
COL9A3-203ENST00000462700 ZNF726P1Q15940 193 aa13.32□□□□□ -0.28
COL9A3-203ENST00000462700 TMED6Q8WW62 240 aa13.32□□□□□ -0.28
COL9A3-203ENST00000462700 ST6GAL2Q96JF0 529 aa13.32□□□□□ -0.28
COL9A3-203ENST00000462700 ARPC5LQ9BPX5 153 aa13.32□□□□□ -0.28
COL9A3-203ENST00000462700 TMEM167BQ9NRX6 74 aa13.32□□□□□ -0.28
COL9A3-203ENST00000462700 LENEPQ9Y5L5 61 aa13.32□□□□□ -0.28
COL9A3-203ENST00000462700 CTXND1A0A1B0GTU2 59 aa13.31□□□□□ -0.28
COL9A3-203ENST00000462700 CBY3A6NI87 242 aa13.31□□□□□ -0.28
COL9A3-203ENST00000462700 SNURFLB1AK76 121 aa13.31□□□□□ -0.28
COL9A3-203ENST00000462700 GNG5P63218 68 aa13.31□□□□□ -0.28
COL9A3-203ENST00000462700 AKR1C8PQ5T2L2 129 aa13.31□□□□□ -0.28
COL9A3-203ENST00000462700 Q6ZQT7 251 aa13.31□□□□□ -0.28
COL9A3-203ENST00000462700 GOLT1AQ6ZVE7 132 aa13.31□□□□□ -0.28
COL9A3-203ENST00000462700 EIF4E3Q8N5X7 224 aaKnown RBP13.31□□□□□ -0.28
COL9A3-203ENST00000462700 ZNF680Q8NEM1 530 aa13.31□□□□□ -0.28
COL9A3-203ENST00000462700 ATP5G1P05496 136 aa13.3□□□□□ -0.28
COL9A3-203ENST00000462700 ATP5G3P48201 142 aa13.3□□□□□ -0.28
COL9A3-203ENST00000462700 ANXA2RQ3ZCQ2 193 aa13.3□□□□□ -0.28
COL9A3-203ENST00000462700 TMEM88Q6PEY1 159 aa13.3□□□□□ -0.28
COL9A3-203ENST00000462700 LINC00612Q8N6U2 182 aa13.3□□□□□ -0.28
COL9A3-203ENST00000462700 C11orf72Q8NBR9 251 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms